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Relevance to Autism

Two de novo protein-truncating variants and two de novo missense variants predicted to be possibly damaging (defined as 1 MPC 2) were identified in the SRPRA gene in ASD probands from the Simons Simplex Collection and the Autism Sequencing Consortium (Iossifov et al., 2014; Satterstrom et al., 2020), while two additional protein-truncating variants in this gene were observed in case samples from the Danish iPSYCH study (Satterstrom et al., 2020). TADA analysis of de novo variants from the Simons Simplex Collection and the Autism Sequencing Consortium and protein-truncating variants from iPSYCH in Satterstrom et al., 2020 identified SRPRA as a candidate gene with a false discovery rate (FDR) 0.01.

Molecular Function

The gene encodes a subunit of the endoplasmic reticulum signal recognition particle receptor that, in conjunction with the signal recognition particle, is involved in the targeting and translocation of signal sequence tagged secretory and membrane proteins across the endoplasmic reticulum.

External Links

        

References

Type
Title
Type of Disorder
Associated Disorders
Author, Year
Primary
The contribution of de novo coding mutations to autism spectrum disorder
ASD
Support
Integrating de novo and inherited variants in 42
ASD
Recent recommendation
Large-Scale Exome Sequencing Study Implicates Both Developmental and Functional Changes in the Neurobiology of Autism
ASD

Rare

Variant ID
Variant Type
Allele Change
Residue Change
Inheritance Pattern
Inheritance Association
Family Type
Author, Year
 GEN1147R001 
 missense_variant 
 c.1397G>A 
 p.Arg466His 
 De novo 
  
 Simplex 
 GEN1147R002 
 frameshift_variant 
 c.963_964insCA 
 p.Ile322GlnfsTer26 
 De novo 
  
 Simplex 
 GEN1147R003 
 frameshift_variant 
 c.1446del 
 p.Gly483AlafsTer49 
 De novo 
  
 Simplex 
 GEN1147R004 
 missense_variant 
 c.149A>G 
 p.Tyr50Cys 
 De novo 
  
 Simplex 
 GEN1147R005 
 missense_variant 
 c.1679T>C 
 p.Val560Ala 
 De novo 
  
 Simplex 
 GEN1147R006 
 synonymous_variant 
 c.645G>A 
 p.Glu215%3D 
 De novo 
  
  

Common

No Common Variants Available
Chromosome
CNV Locus
CNV Type
# of studies
Animal Model
11
Duplication
 1
 
11
Duplication
 1
 
11
Deletion
 9
 
11
Duplication
 1
 
11
Deletion-Duplication
 5
 
11
Deletion-Duplication
 13
 
11
Deletion
 2
 
11
Deletion
 9
 

No Animal Model Data Available

No PIN Data Available
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