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Relevance to Autism

Abu-Libdeh et al., 2019 identified a homozygous frameshift variant in the NTNG2 gene in eight individuals from four consanguineous families of Arab Muslim origin, all of whom presented with global developmental delay, hypotonia, absent speech, joint laxity, and autistic features such as poor eye contact and stereotypic hand movements. Dias et al., 2019 identified 16 individuals from seven unrelated families with ultra-rare homozygous missense variants in NTNG2 who presented with shared features of a neurodevelopmental disorder consisting of global developmental delay, severe to profound intellectual disability, muscle weakness and abnormal tone, autistic features (with all affected individuals in two families reported to have autism) and other behavioral abnormalities, and variable dysmorphic features; these missense variants were subsequently demonstrated to result in significantly reduced cell surface expression in functional studies.

Molecular Function

Involved in controlling patterning and neuronal circuit formation at the laminar, cellular, subcellular and synaptic levels. Promotes neurite outgrowth of both axons and dendrites.

External Links

        

References

Type
Title
Type of Disorder
Associated Disorders
Author, Year
Primary
Homozygous frameshift variant in NTNG2, encoding a synaptic cell adhesion molecule, in individuals with developmental delay, hypotonia, and autisti...
DD, autistic features
Support
Netrin-G2 dysfunction causes a Rett-like phenotype with areflexia.
DD
Stereotypies
Support
Integrating de novo and inherited variants in 42
ASD
Recent Recommendation
Homozygous Missense Variants in NTNG2, Encoding a Presynaptic Netrin-G2 Adhesion Protein, Lead to a Distinct Neurodevelopmental Disorder.
DD, ID, ASD or autistic features

Rare

Variant ID
Variant Type
Allele Change
Residue Change
Inheritance Pattern
Inheritance Association
Family Type
Author, Year
 GEN1117R001a 
 frameshift_variant 
 c.376dup 
 p.Ser126PhefsTer241 
 Familial 
 Both parents 
 Simplex 
 GEN1117R002a 
 frameshift_variant 
 c.376dup 
 p.Ser126PhefsTer241 
 Familial 
 Both parents 
 Multiplex 
 GEN1117R003a 
 frameshift_variant 
 c.376dup 
 p.Ser126PhefsTer241 
 Familial 
 Both parents 
 Multiplex 
 GEN1117R004a 
 frameshift_variant 
 c.376dup 
 p.Ser126PhefsTer241 
 Familial 
 Both parents 
 Simplex 
 GEN1117R005a 
 missense_variant 
 c.1367G>A 
 p.Cys456Tyr 
 Familial 
 Both parents 
 Multiplex 
 GEN1117R006a 
 missense_variant 
 c.319T>G 
 p.Trp107Gly 
 Familial 
 Both parents 
 Extended multiplex 
 GEN1117R007a 
 missense_variant 
 c.1076C>G 
 p.Ser359Cys 
 Familial 
 Both parents 
 Multiplex 
 GEN1117R008a 
 missense_variant 
 c.1065G>G 
 p.Cys355Trp 
 Familial 
 Both parents 
 Multiplex 
 GEN1117R009a 
 missense_variant 
 c.242G>A 
 p.Cys81Tyr 
 Familial 
 Both parents 
 Extended multiplex 
 GEN1117R010a 
 missense_variant 
 c.446T>C 
 p.Met149Thr 
 Familial 
 Both parents 
 Multiplex 
 GEN1117R011a 
 missense_variant 
 c.599C>T 
 p.Ser200Leu 
 Familial 
 Both parents 
 Simplex 
 GEN1117R012a 
 frameshift_variant 
 c.376dup 
 p.Ser126PhefsTer241 
 Familial 
 Both parents 
 Multiplex 
 GEN1117R013a 
 frameshift_variant 
 c.376dup 
 p.Ser126PhefsTer241 
 Familial 
 Both parents 
 Simplex 
 GEN1117R014 
 synonymous_variant 
 c.1548C>T 
 p.Leu516%3D 
 De novo 
  
 Multiplex 
 GEN1117R015 
 missense_variant 
 c.591G>C 
 p.Glu197Asp 
 De novo 
  
 Multiplex 
 GEN1117R016a 
 missense_variant 
 c.1368C>G 
 p.Cys456Trp 
 Familial 
 Both parents 
 Simplex 

Common

No Common Variants Available
Chromosome
CNV Locus
CNV Type
# of studies
Animal Model
9
Duplication
 1
 
9
Deletion
 1
 
9
Duplication
 1
 
9
Deletion
 1
 
9
Duplication
 1
 
9
Deletion-Duplication
 10
 
9
N/A
 2
 
9
Duplication
 2
 
9
Deletion-Duplication
 9
 

Model Summary

Instructive role for axon-derived factors in the segmental differentiation of target dendrites.

References

Type
Title
Author, Year
Primary
Axonal netrin-Gs transneuronally determine lamina-specific subdendritic segments.

M_NTNG2_1_KO_HM

Model Type: Genetic
Model Genotype: Homozygous
Mutation: Targeted disruption of Ntng2 gene by replacing the 1.3kb Kpn1-Bg1II fragment with a loxp-pgk-neo-loxP cassette.
Allele Type: Targeted (Knock out)
Strain of Origin: C57BL/6J
Genetic Background: Not Specified
ES Cell Line: E14
Mutant ES Cell Line: Not Specified
Model Source: Not Specified

M_NTNG2_1_KO_HM

Category
Entity
Quantity
Experimental Paradigm
Age at Testing
Protein expression: in situ protein expression1
Decreased
Description: Decreased ngl-2 lamina specific immunoreactivity in the hippocampus
Exp Paradigm: Ngl-2 expression pattern
 Immunohistochemistry
 Unreported
Protein expression level evidence1
 No change
 Immunohistochemistry
 Unreported
Protein expression level evidence1
 No change
 Western blot
 Unreported
 Not Reported: Circadian sleep/wake cycle, Communications, Developmental profile, Emotion, Immune response, Learning & memory, Maternal behavior, Motor phenotype, Neuroanatomy / ultrastructure / cytoarchitecture, Neurophysiology, Physiological parameters, Repetitive behavior, Seizure, Sensory, Social behavior

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