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6p12.1CNV Type: Deletion-Duplication


Largest CNV size: 1074707 bp

Statistics Box:
Number of Reports: 16



Summary Information

A maternally-inherited duplication in the 6p12.1 locus was identified in a proband with ASD and intellectual disability as part of a screen for cases with CHRNA7 duplications (Gillentine et al., 2016).

Additional Locus Information

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References

Major Reports

Title
Author, Year
Report Class
CNV Type
An evidence-based approach to establish the functional and clinical significance of copy number variants in intellectual and developmental disabili...
Deletion-Duplication
Sporadic autism exomes reveal a highly interconnected protein network of de novo mutations.
Deletion
Refinement and discovery of new hotspots of copy-number variation associated with autism spectrum disorder.
Deletion-Duplication
Excess of rare, inherited truncating mutations in autism.
Duplication

Minor Reports

Title
Author, Year
Report Class
CNV Type
Multiple recurrent de novo CNVs, including duplications of the 7q11.23 Williams syndrome region, are strongly associated with autism.
Deletion-Duplication
Rare de novo and transmitted copy-number variation in autistic spectrum disorders.
Deletion
Use of array CGH to detect exonic copy number variants throughout the genome in autism families detects a novel deletion in TMLHE.
Duplication
Rare deletions at the neurexin 3 locus in autism spectrum disorder.
Deletion
Novel candidate genes and regions for childhood apraxia of speech identified by array comparative genomic hybridization.
Duplication
A discovery resource of rare copy number variations in individuals with autism spectrum disorder.
Deletion
Prospective diagnostic analysis of copy number variants using SNP microarrays in individuals with autism spectrum disorders.
Deletion
Transmission disequilibrium of small CNVs in simplex autism.
Duplication
Performance of case-control rare copy number variation annotation in classification of autism.
Deletion-Duplication
Copy-number variations are enriched for neurodevelopmental genes in children with developmental coordination disorder.
Deletion
The Cognitive and Behavioral Phenotypes of Individuals with CHRNA7 Duplications.
Duplication
Comparative Analyses of Copy-Number Variation in Autism Spectrum Disorder and Schizophrenia Reveal Etiological Overlap and Biological Insights.
Deletion

Cases

Cohort ID
Author, Year
Descripton
Cohort Size
Diagnosis
Age
Gender
CNV Size
Deletion
Duplication
Total CNV's
 celestino-soper_11_ASD_discovery_cases
 ASD probands from Simons Simplex Collection (SSC) trios. 90 of the probands in this study were also used in the Sanders et al. 2011 CNV report.
 99
 ASD
 
 87.88% Male
 133
 0
 1
 1
 engchuan_15_ASD_discovery_cases
 Samples from the Autism Genome Project (AGP)
 1892
 Diagnosis of ASD based on Autism Diagnostic Observation Schedule (ADOS) and Autism Diagnostic Interview-Revised (ADI-R)
 N/A
 85.78% Male
 77066
 21
 6
 27
 gillentine_16_ASD/ADHD/DD/ID_discovery_cases
 18 patients from 17 families evaluated by providers at Texas Children's Hospital and tested by clinical chromosomal microarray (CMA) by the Baylor Genetics Laboratory (BGL) or Signature Genomic Laboratory for CHRNA7 duplications
 18
 7/17 cases met criteira for ASD based on clinical impression; 11/18 cases presented with ADHD. Cognitive and behavioral testing included the Differential Ability Scales, Second Edition (DAS-II), the Autism Diagnostic Interview-Revised (ADI-R), the Autism Diagnostic Observation Schedule, Second Edition (ADOS-2), the Adaptive Behavior Assessment System, Second Edition (ABAS-II), and the Behavioral Assessment for Children, Second Edition (BASC-2).
 Average, 9.9 years
 66.67% Male
 1074707
 0
 1
 1
 girirajan_13a_ASD_discovery_cases
 1979 simplex cases from the Simons Simplex Collection (SSC), 579 multiplex cases from AGRE.
 2588
 Diagnosis of ASD based on meeting criteria on the Autism Diagnostic Observation Schedule (ADOS) and on the Autism Diagnostic Interview, Revised (ADI-R)
 NA
 NA
 44680
 3
 5
 8
 kaminsky_11_DD/ID/ASD_discovery_cases
 Cases from the International Standards for Cytogenomic Arrays (ISCA) consortium
 15749
 Unexplained developmental delay, intellectual disability, dysmorphic features, multiple congenital anomalies, autism spectrum disorders, or clinical features suggestive of a chromosomal syndrome
 NA
 NA
 2562744
 1
 1
 2
 krumm_13_ASD_discovery_cases
 Probands from quad families ascertained as part of the Simons Simplex Collection (SSC); CNVs detected using data from four previously published exome sequencing studies (O'Roak et al., 2011; Iossifov et al., 2012; O'Roak et al., 2012; Sanders et al., 2012)
 411
 Diagnosis of ASD. Social Responsiveness Scale (SRS) used as a quantitative measure of social deficits
 N/A
 81.265% Male
 4090
 0
 1
 1
 krumm_15_ASD_discovery_cases
 Probands from the Simons Simplex Collection
 2377
 Diagnosis of ASD
 N/A
 N/A
 119629
 0
 5
 5
 kushima_18_SCZ_discovery_cases
 Individuals predominantly recruited from the middle of Honshu Island (Japan)
 2458
 Cases were diagnosed with schizophrenia (SCZ) according to DSM-5 criteria.
 Median age, 44 years
 55.0% Male
 45799
 2
 0
 2
 laffin_12_CAS_discovery_cases
 Participants recruited and consented for a study of pediatric motor speech disorders
 24
 Diagnosis of childhood apraxia of speech (CAS) assessed by Madison Speech Assessment Protocol.
 Mean, 8.3 3.7 yrs.
 66% Male
 714847
 0
 1
 1
 levy_11_ASD_discovery_cases
 Autistic probands from 887 families from the Simons Simplex Collection (SSC)
 858
 ASD
 
 87.06% Male
 80127
 1
 0
 1
 mosca_16_DCD_discovery_cases
 Participants recruited as part of a multidisciplinary study at the Alberta Children's Hospital (Calgary, Alberta, Canada)
 82
 All cases met diagnostic criteria for developmental coordination disorder (DCD) with or without co-occurring ADHD and/or reading disorder.
 Range, 8-17 years (Mean, 10.06 2.92 yrs.)
 N/A
 28849
 1
 0
 1
 nava_13_ASD_discovery_cases
 Subjects recruited in the Centre de Reference deficiences intellectuelles de causes rares', the 'Centre Diagnostic Autisme', Pitie-Salpetriere Hospital (Paris, France) or the Fondation Lejeune over a period of 3 years (20092011).
 194
 Cases assessed with ADI-R
 N/A
 83.5% Male
 102000
 1
 0
 1
 o'roak_12_ASD_discovery_cases
 Autistic probands from the Simons Simplex Collection (SSC), from an initial cohort of 189 autism families
 122
 ASD/autism
 NA
 NA
 42729
 1
 0
 1
 prasad_12_ASD_discovery_cases
 Unrelated ASD cases recruited from three Canadian sites (Hospital for Sick Children, McMaster University, and Memorial University of Newfoundland); the majority of cases had been previously genotyped with results published in Marshall et al., 2008 and Pinto et al., 2010. 20 cases from initial cohort of 696 were excluded from further analysis (due to CNVs > 5 Mb).
 676
 Diagnosis of ASD based on meeting criteria on ADI-R and/or ADOS
 NA
 82.84% Male
 10094
 2
 0
 2
 sanders_11_ASD_discovery_cases
 Autistic probands from the Simons Simplex Collection (SSC). 872 probands in quartet families, 272 probands in trios.
 1124
 ASD diagnosis: 89.5% autism; 8.5% PDD-NOS, 2% Asperger syndrome. Mean full-scale IQ 85.1 1.5 (mean verbal IQ, 81.9 1.7; mean non-verbal IQ, 88.4 1.4)
 Mean, 9.1 yrs.
 86.1% Male
 205611
 49
 3
 52
 vaags_11_ASD_discovery_cases
 Discovery cohort of Canadian individuals with ASD
 1158
 ASD
 NA
 NA
 20391
 1
 0
 1

Controls

Cohort ID
Author, Year
Descripton
Cohort Size
Diagnosis
Age
Gender
CNV Size
Deletion
Duplication
Total CNV's
 bacchelli_20_ASD_discovery_controls
  NA NA
 Anonymized DNA samples from Italian individuals with no psychiatric disorders
 365
 Control
 N/A
 54.52% Male
 30675
 1
 1
 2
 engchuan_15_ASD_discovery_controls
 Platform-matched controls from three large studies: SAGE (Study of Addiction Genetics and Environment), Ontario Colorectal Cancer study, and HABC (Health Aging and Body Composition)
 2342
 Controls; subjects had no previous psychiatric history
 N/A
 46.67% Male
 77066
 30
 4
 34
 girirajan_13a_ASD_discovery_controls1
 NIMH control cohort consisting of 207 DNA samples obtained from Rutgers Univ. Cell and DNA Repository, and 373 individuals from ClinSeq study of artherosclerotic disease
 580
 Control. Individuals from NIMH control cohort negative for DSM-IV criteria for major depression and history of bipolar disorder or psychosis.
 NA
 NA
 44680
 1
 0
 1
 girirajan_13a_ASD_discovery_controls2
 Controls characterized through the Wellcome Trust Case-Control Consortium (WTCCC) for smaller hotspot regions and candidate-gene events
 2090
 Control
 NA
 NA
 N/A
 1
 0
 1
 kaminsky_11_DD/ID/ASD_discovery_controls
 Controls from the International Standards for Cytogenomic Arrays (ISCA) consortium
 10118
 Controls
 NA
 NA
 NA
 NA
 NA
 NA
 krumm_13_ASD_discovery_controls
 Unaffected siblings of ASD probands from quad families ascertained as part of the Simons Simplex Collection (SSC); CNVs detected using data from four previously published exome sequencing studies (O'Roak et al., 2011; Iossifov et al., 2012; O'Roak et al., 2012; Sanders et al., 2012)
 411
 Control (unaffected siblings of ASD probands). Social Responsiveness Scale (SRS) used as a quantitative measure of social deficits
 N/A
 46.47% Male
 4090
 0
 1
 1
 krumm_15_ASD_discovery_controls
 Unaffected siblings from quad families from the Simons Simplex Collection
 1786
 Control
 N/A
 N/A
 233190
 2
 2
 4
 kushima_18_ASD/SCZ_discovery_controls
 Individuals selected from the general population and predominantly recruited from the middle of Honshu Island (Japan)
 2095
 Controls had no history of mental disorders based upon responses to questionnaires or self-reporting.
 Median age, 37 years
 52.0% Male
 0
 0
 0
 0
 levy_11_ASD_discovery_controls
 Unaffected siblings of autistic probands from 887 families from the Simons Simplex Collection (SSC)
 863
 Control
 
 47.97% Male
 0
 0
 0
 0
 prasad_12_ASD_discovery_controls
 PDx controls [1000 DNA samples from reportedly healthy donors (50.2% male) from BioServe (Beltsville, MD)] and 4139 in-house controls previously reported in Krawcak et al. 2006, Stewart et al. 2009, and Bierut et al. 2010. CNVs identified in controls were used to define rare ASD-specific CNVs.
 5139
 Control
 NA
 NA (PDx controls 50.2% male)
 10094
 0
 0
 0
 sanders_11_ASD_discovery_controls
 Matched siblings of autistic probands from the Simons Simplex Collection (SSC).
 872
 Controls
 Mean, 10.0 yrs.
 
 333792
 37
 1
 38

Cases

Cohort ID
Geographical Ancestry
Discovery Method
Platform
Algorithm
Software
Validation Method
 celestino-soper_11_ASD_discovery_cases
 
 aCGH
  Agilent 1M
 ADM-2
 Agilent Feature Extraction v10.7.3.1, Agilent DNA Analytics v4.0.76
 None
 engchuan_15_ASD_discovery_cases
  Caucasian
 Solid phase hybridization
  Illumina 1M
 
 
 None
 gillentine_16_ASD/ADHD/DD/ID_discovery_cases
  N/A
 CMA
  Platform N/A
 
 
 None
 girirajan_13a_ASD_discovery_cases
  NA
 aCGH
  Custom microarray with a high density of probes targeted to 1,367 regions with a susceptible genomic architecture
 ADM-2
 Agilent Genomic Workbench
 aCGH (NimbleGen 135K array)
 kaminsky_11_DD/ID/ASD_discovery_cases
  NA
 aCGH
  Agilent 44K, Agilent 105K
 
 Feature Extraction, DNA Analytics
 FISH, qPCR, MLPA, aCGH, standard G-banded chromosome analysis
 krumm_13_ASD_discovery_cases
  N/A
 WES
  Whole exome sequencing platforms used in four recent publications (O'Roak et al., 2011; Sanders et al., 2012; O'Roak et al., 2012, and Iossifov et al., 2012)
 DNACopy, CGHCall
 CoNIFER
 None
 krumm_15_ASD_discovery_cases
  N/A
 WES
 
 CoNIFER, XHMM
 
 Solid phase hybridization (Illumina 1M, 1 M Duo, or Omni 2.5)
 kushima_18_SCZ_discovery_cases
  Japanese
 aCGH
  NimbleGen 720K, Agilent 400K
 FASST2
 Nexus Copy Number v.9.0
 N/A
 laffin_12_CAS_discovery_cases
  NA
 aCGH
  Customized 385K NimbleGen array with increased coverage of genes & regions previously associated with CAS
 
 OGT CytoSure Interpret v.3.4.3
 None
 levy_11_ASD_discovery_cases
 
 aCGH
  NimbleGen HD2
 HMM
 
 
 mosca_16_DCD_discovery_cases
  Canada
 Solid phase hybridization
  Illumina HumanOmni2.5-Quad BeadChip
 iPattern, PennCNV, QuantiSNP, CNVPartition
 
 None
 nava_13_ASD_discovery_cases
  France
 Solid phase hybridization
  Illumina cytoSNP-12, Illumina 660W-Quad, Illumina 370CNV-Quad
 
 GenomeStudio v.2011.1, CNVPartition v.3.1.6
 None
 o'roak_12_ASD_discovery_cases
  NA
 WES
  NimbleGen EZ Exome V2.0, Illumina GAIIx or HiSeq2000
 HMM
 mrsFAST aligner
 aCGH, Sanger sequencing
 prasad_12_ASD_discovery_cases
  Canada
 aCGH
  Agilent 1M
 ADM-2, DNAcopy (R Bioconductor)
 DNA Analytics v4.0.85 (Agilent), DNAcopy
 None
 sanders_11_ASD_discovery_cases
  White non-Hispanic, 74.5%; mixed, 9.3%, Asian, 4.3%, White Hispanic, 4.0%, African-American, 3.8%; other, 4.2&
 Solid phase hybridization
  Illumina 1M v1, Illumina 1M v3
 PennCNV, QuantiSNP, GNOSIS
 
 
 vaags_11_ASD_discovery_cases
  Canadian
 aCGH, array SNP, solid phase hybridization
  Affymetrix 6.0, Illumina Infinium 1M, Illumina Omni 2.5M, Agilent 1M
 
 
 None

Controls

Cohort ID
Geographical Ancestry
Discovery Method
Platform
Algorithm
Software
Validation Method
  bacchelli_20_ASD_discovery_controls
  Italian
  Solid phase hybridization
  Illumina Infinium PsychArray
  PennCNV, QuantiSNP, CNVPartition
 
  None
  engchuan_15_ASD_discovery_controls
  Caucasian
  Solid phase hybridization
  Illumina 1M
 
 
  None
  girirajan_13a_ASD_discovery_controls1
  NA
  aCGH
  Custom microarray with a high density of probes targeted to 1,367 regions with a susceptible genomic architecture
  ADM-2
  Agilent Genomic Workbench
  None
  girirajan_13a_ASD_discovery_controls2
  NA
  Solid phase hybridization
  Illumina 1.2M SNP microarray
 
 
  None
  kaminsky_11_DD/ID/ASD_discovery_controls
  NA
  aCGH
  Agilent 44K, Agilent 105K
 
  Feature Extraction, DNA Analytics
 
  krumm_13_ASD_discovery_controls
  N/A
  WES
  Whole exome sequencing platforms used in four recent publications (O'Roak et al., 2011; Sanders et al., 2012; O'Roak et al., 2012, and Iossifov et al., 2012)
  DNACopy, CGHCall
  CoNIFER
  Solid phase hybridization (Illumina 1M), aCGH (Agilent SurePrint G3 4x180K), or confirmed by manual inspection
  krumm_15_ASD_discovery_controls
  N/A
  WES
 
  CoNIFER, XHMM
 
  Solid phase hybridization (Illumina 1M, 1 M Duo, or Omni 2.5)
  kushima_18_ASD/SCZ_discovery_controls
  Japanese
  aCGH
  NimbleGen 720K, Agilent 400K
  FASST2
  Nexus Copy Number v.9.0
  N/A
  levy_11_ASD_discovery_controls
 
  aCGH
  NimbleGen HD2
  HMM
 
 
  prasad_12_ASD_discovery_controls
  NA
  aCGH
  Agilent 1M
  ADM-2, DNAcopy (R Bioconductor)
  DNA Analytics v4.0.85 (Agilent), DNAcopy
 
  sanders_11_ASD_discovery_controls
 
  Solid phase hybridization
  Illumina 1M v1 or Illumina 1M v3
  PennCNV, QuantiSNP, GNOSIS
 
 

Cases

Patient ID
Author, Year
Age
Gender
Primary Diagnosis
Clinical Profile
Cognitive Profile
CNV Start
CNV End
CNV Size
Genome Build
Type Method
Validation
  celestino-soper_11_ASD_discovery_cases-11291
 NA
 M
 ASD
 NA
 NA
 55495528
 55495661
  134
 GRCh38
 Duplication
 No
  engchuan_15_ASD_discovery_cases-case1050_3
 N/A
 N/A
 ASD
 Diagnosis of ASD based on Autism Diagnostic Observation Schedule (ADOS) and Autism Diagnostic Interview-Revised (ADI-R)
 
 57048655
 57089752
  41098
 GRCh38
 Deletion
 No
  engchuan_15_ASD_discovery_cases-case13117_1343
 N/A
 N/A
 ASD
 Diagnosis of ASD based on Autism Diagnostic Observation Schedule (ADOS) and Autism Diagnostic Interview-Revised (ADI-R)
 
 52747644
 52824710
  77067
 GRCh38
 Deletion
 No
  engchuan_15_ASD_discovery_cases-case13145_1623
 N/A
 N/A
 ASD
 Diagnosis of ASD based on Autism Diagnostic Observation Schedule (ADOS) and Autism Diagnostic Interview-Revised (ADI-R)
 
 55961339
 55997446
  36108
 GRCh38
 Deletion
 No
  engchuan_15_ASD_discovery_cases-case14032_600
 N/A
 N/A
 ASD
 Diagnosis of ASD based on Autism Diagnostic Observation Schedule (ADOS) and Autism Diagnostic Interview-Revised (ADI-R)
 
 55961339
 55997446
  36108
 GRCh38
 Deletion
 No
  engchuan_15_ASD_discovery_cases-case14169_2750
 N/A
 N/A
 ASD
 Diagnosis of ASD based on Autism Diagnostic Observation Schedule (ADOS) and Autism Diagnostic Interview-Revised (ADI-R)
 
 55961339
 55997446
  36108
 GRCh38
 Deletion
 No
  engchuan_15_ASD_discovery_cases-case14201_3250
 N/A
 N/A
 ASD
 Diagnosis of ASD based on Autism Diagnostic Observation Schedule (ADOS) and Autism Diagnostic Interview-Revised (ADI-R)
 
 55961339
 56010468
  49130
 GRCh38
 Deletion
 No
  engchuan_15_ASD_discovery_cases-case14265_3880
 N/A
 N/A
 ASD
 Diagnosis of ASD based on Autism Diagnostic Observation Schedule (ADOS) and Autism Diagnostic Interview-Revised (ADI-R)
 
 57048655
 57089752
  41098
 GRCh38
 Duplication
 No
  engchuan_15_ASD_discovery_cases-case14308_4250
 N/A
 N/A
 ASD
 Diagnosis of ASD based on Autism Diagnostic Observation Schedule (ADOS) and Autism Diagnostic Interview-Revised (ADI-R)
 
 57046086
 57089752
  43667
 GRCh38
 Deletion
 No
  engchuan_15_ASD_discovery_cases-case16067_1571134001
 N/A
 N/A
 ASD
 Diagnosis of ASD based on Autism Diagnostic Observation Schedule (ADOS) and Autism Diagnostic Interview-Revised (ADI-R)
 
 52747644
 52824710
  77067
 GRCh38
 Deletion
 No
  engchuan_15_ASD_discovery_cases-case3031_4
 N/A
 N/A
 ASD
 Diagnosis of ASD based on Autism Diagnostic Observation Schedule (ADOS) and Autism Diagnostic Interview-Revised (ADI-R)
 
 55961339
 55997446
  36108
 GRCh38
 Deletion
 No
  engchuan_15_ASD_discovery_cases-case3077_4
 N/A
 N/A
 ASD
 Diagnosis of ASD based on Autism Diagnostic Observation Schedule (ADOS) and Autism Diagnostic Interview-Revised (ADI-R)
 
 55961339
 55997446
  36108
 GRCh38
 Deletion
 No
  engchuan_15_ASD_discovery_cases-case3095_3
 N/A
 N/A
 ASD
 Diagnosis of ASD based on Autism Diagnostic Observation Schedule (ADOS) and Autism Diagnostic Interview-Revised (ADI-R)
 
 55961339
 55997446
  36108
 GRCh38
 Deletion
 No
  engchuan_15_ASD_discovery_cases-case3174_3
 N/A
 N/A
 ASD
 Diagnosis of ASD based on Autism Diagnostic Observation Schedule (ADOS) and Autism Diagnostic Interview-Revised (ADI-R)
 
 55961339
 55997446
  36108
 GRCh38
 Deletion
 No
  engchuan_15_ASD_discovery_cases-case4145_1
 N/A
 N/A
 ASD
 Diagnosis of ASD based on Autism Diagnostic Observation Schedule (ADOS) and Autism Diagnostic Interview-Revised (ADI-R)
 
 55961339
 55997446
  36108
 GRCh38
 Deletion
 No
  engchuan_15_ASD_discovery_cases-case4299_1
 N/A
 N/A
 ASD
 Diagnosis of ASD based on Autism Diagnostic Observation Schedule (ADOS) and Autism Diagnostic Interview-Revised (ADI-R)
 
 57048655
 57089752
  41098
 GRCh38
 Deletion
 No
  engchuan_15_ASD_discovery_cases-case4319_1
 N/A
 N/A
 ASD
 Diagnosis of ASD based on Autism Diagnostic Observation Schedule (ADOS) and Autism Diagnostic Interview-Revised (ADI-R)
 
 55961339
 56010468
  49130
 GRCh38
 Deletion
 No
  engchuan_15_ASD_discovery_cases-case4430_1
 N/A
 N/A
 ASD
 Diagnosis of ASD based on Autism Diagnostic Observation Schedule (ADOS) and Autism Diagnostic Interview-Revised (ADI-R)
 
 55959215
 56010468
  51254
 GRCh38
 Deletion
 No
  engchuan_15_ASD_discovery_cases-case4448_100
 N/A
 N/A
 ASD
 Diagnosis of ASD based on Autism Diagnostic Observation Schedule (ADOS) and Autism Diagnostic Interview-Revised (ADI-R)
 
 55961339
 55997446
  36108
 GRCh38
 Deletion
 No
  engchuan_15_ASD_discovery_cases-case4461_1
 N/A
 N/A
 ASD
 Diagnosis of ASD based on Autism Diagnostic Observation Schedule (ADOS) and Autism Diagnostic Interview-Revised (ADI-R)
 
 55961339
 55997446
  36108
 GRCh38
 Deletion
 No
  engchuan_15_ASD_discovery_cases-case4509_1
 N/A
 N/A
 ASD
 Diagnosis of ASD based on Autism Diagnostic Observation Schedule (ADOS) and Autism Diagnostic Interview-Revised (ADI-R)
 
 55959215
 56010468
  51254
 GRCh38
 Deletion
 No
  engchuan_15_ASD_discovery_cases-case4526_1
 N/A
 N/A
 ASD
 Diagnosis of ASD based on Autism Diagnostic Observation Schedule (ADOS) and Autism Diagnostic Interview-Revised (ADI-R)
 
 55959215
 56010468
  51254
 GRCh38
 Deletion
 No
  engchuan_15_ASD_discovery_cases-case5131_3
 N/A
 N/A
 ASD
 Diagnosis of ASD based on Autism Diagnostic Observation Schedule (ADOS) and Autism Diagnostic Interview-Revised (ADI-R)
 
 57048655
 57088913
  40259
 GRCh38
 Duplication
 No
  engchuan_15_ASD_discovery_cases-case5469_3
 N/A
 N/A
 ASD
 Diagnosis of ASD based on Autism Diagnostic Observation Schedule (ADOS) and Autism Diagnostic Interview-Revised (ADI-R)
 
 55961339
 55997446
  36108
 GRCh38
 Deletion
 No
  engchuan_15_ASD_discovery_cases-case6125_4
 N/A
 N/A
 ASD
 Diagnosis of ASD based on Autism Diagnostic Observation Schedule (ADOS) and Autism Diagnostic Interview-Revised (ADI-R)
 
 54827942
 54863388
  35447
 GRCh38
 Duplication
 No
  engchuan_15_ASD_discovery_cases-case6245_4
 N/A
 N/A
 ASD
 Diagnosis of ASD based on Autism Diagnostic Observation Schedule (ADOS) and Autism Diagnostic Interview-Revised (ADI-R)
 
 54516614
 54547115
  30502
 GRCh38
 Duplication
 No
  engchuan_15_ASD_discovery_cases-case6300_3
 N/A
 N/A
 ASD
 Diagnosis of ASD based on Autism Diagnostic Observation Schedule (ADOS) and Autism Diagnostic Interview-Revised (ADI-R)
 
 57040244
 57089752
  49509
 GRCh38
 Duplication
 No
  engchuan_15_ASD_discovery_cases-case8048_202
 N/A
 N/A
 ASD
 Diagnosis of ASD based on Autism Diagnostic Observation Schedule (ADOS) and Autism Diagnostic Interview-Revised (ADI-R)
 
 57048655
 57089752
  41098
 GRCh38
 Duplication
 No
  gillentine_16_ASD/ADHD/DD/ID_discovery_cases-patient16
 13 yrs.
 F
 ASD and intellectual disability
 Case met or exceeded cutoff scores in all behavioral areas on ADI-R and met criteria for autism on ADOS (clinical impression of ASD). Original reason for referral: Intellectual disability, speech delay, history of submucous cleft palate. Developmental milestones: sitting at 7 months, crawling at 9 months, walking at 16 months, first word at 48 months, two word sentences at 96 months. Langauge and communication evaluation: language impairment. Motor and musculoskeletal evaluation: no hypotobia. Behavioral/psychiatric evaluation: no ADHD. Epilepsy/seizures: no seizures. Growth parameters: height 50th %ile, weight 15th %ile, OFC 75th %ile. Ethnicity: Caucasian/Korean. Family history: carrier parental phenotype, father has a history of apraxia and reading problems, as well as a history of reading therapy; noncarrier parental phenotype, mohter has a history of hypotonia and comprehension problems in school, as well as a history of mild depression; two siblings with unspecified neuropsychiatric conditions (one with additional cognitive deficits) that tested negative for the CHRNA7 duplication.
 Full scale ratio IQ (DAS-II): 77.
 54389981
 55464687
  1074707
 GRCh38
 Duplication
 No
  girirajan_13a_ASD_discovery_cases-11425.p1
 N/A
 N/A
 ASD
 Diagnosis of ASD based on meeting criteria on the Autism Diagnostic Observation Schedule (ADOS) and on the Autism Diagnostic Interview, Revised (ADI-R)
 N/A
 57047023
 57091703
  44681
 GRCh38
 Duplication
 Yes
  girirajan_13a_ASD_discovery_cases-11468.p1
 N/A
 N/A
 ASD
 Diagnosis of ASD based on meeting criteria on the Autism Diagnostic Observation Schedule (ADOS) and on the Autism Diagnostic Interview, Revised (ADI-R)
 N/A
 57047023
 57091703
  44681
 GRCh38
 Duplication
 Yes
  girirajan_13a_ASD_discovery_cases-11933.p1
 N/A
 N/A
 ASD
 Diagnosis of ASD based on meeting criteria on the Autism Diagnostic Observation Schedule (ADOS) and on the Autism Diagnostic Interview, Revised (ADI-R)
 N/A
 57047023
 57091703
  44681
 GRCh38
 Duplication
 No
  girirajan_13a_ASD_discovery_cases-12106.p1
 N/A
 N/A
 ASD
 Diagnosis of ASD based on meeting criteria on the Autism Diagnostic Observation Schedule (ADOS) and on the Autism Diagnostic Interview, Revised (ADI-R)
 N/A
 57047023
 57091703
  44681
 GRCh38
 Duplication
 Yes
  girirajan_13a_ASD_discovery_cases-13415.p1
 N/A
 N/A
 ASD
 Diagnosis of ASD based on meeting criteria on the Autism Diagnostic Observation Schedule (ADOS) and on the Autism Diagnostic Interview, Revised (ADI-R)
 N/A
 57047023
 57091703
  44681
 GRCh38
 Deletion
 Yes
  girirajan_13a_ASD_discovery_cases-13865.p1
 N/A
 N/A
 ASD
 Diagnosis of ASD based on meeting criteria on the Autism Diagnostic Observation Schedule (ADOS) and on the Autism Diagnostic Interview, Revised (ADI-R)
 N/A
 57047023
 57091703
  44681
 GRCh38
 Deletion
 Yes
  girirajan_13a_ASD_discovery_cases-AU1187301
 N/A
 N/A
 ASD
 Diagnosis of ASD based on meeting criteria on the Autism Diagnostic Observation Schedule (ADOS) and on the Autism Diagnostic Interview, Revised (ADI-R)
 N/A
 57047023
 57091703
  44681
 GRCh38
 Duplication
 Yes
  girirajan_13a_ASD_discovery_cases-AU1559301
 N/A
 N/A
 ASD
 Diagnosis of ASD based on meeting criteria on the Autism Diagnostic Observation Schedule (ADOS) and on the Autism Diagnostic Interview, Revised (ADI-R)
 N/A
 57047023
 57091703
  44681
 GRCh38
 Deletion
 Yes
  kaminsky_11_DD/ID/ASD_discovery_cases-ISCA00002241
 NA
 NA
 Developmental delay/intellectual disability/ASD
 Clinical profile NA
 Cognitive profile NA
 54263893
 56826637
  2562745
 GRCh38
 Deletion
 Yes
  kaminsky_11_DD/ID/ASD_discovery_cases-ISCA00005173
 NA
 NA
 Developmental delay/intellectual disability/ASD
 Clinical profile NA
 Cognitive profile NA
 53931543
 54584920
  653378
 GRCh38
 Duplication
 Yes
  krumm_13_ASD_discovery_cases-case12106.p1
 N/A
 M
 ASD
 ASD proband from SSC quad family 12106. SRS score of 88.
 Full-scale IQ (FSIQ) score of 112.
 57050773
 57054863
  4091
 GRCh38
 Duplication
 No (not tested)
  krumm_15_ASD_discovery_cases-case11425.p1
 N/A
 Male
 ASD
 Proband from the Simons Simplex Collection (SSC). Family type: Quad
 
 57047312
 57054863
  7552
 GRCh38
 Duplication
 Yes
  krumm_15_ASD_discovery_cases-case11468.p1
 N/A
 Male
 ASD
 Proband from the Simons Simplex Collection (SSC). Family type: Trio
 
 57050763
 57090316
  39554
 GRCh38
 Duplication
 Yes
  krumm_15_ASD_discovery_cases-case11933.p1
 N/A
 Male
 ASD
 Proband from the Simons Simplex Collection (SSC). Family type: Quad
 
 57050763
 57090316
  39554
 GRCh38
 Duplication
 Yes
  krumm_15_ASD_discovery_cases-case12106.p1
 N/A
 Male
 ASD
 Proband from the Simons Simplex Collection (SSC). Family type: Quad
 
 57050763
 57090316
  39554
 GRCh38
 Duplication
 Yes
  krumm_15_ASD_discovery_cases-case13822.p1
 N/A
 Male
 ASD
 Proband from the Simons Simplex Collection (SSC). Family type: Trio
 
 55282224
 55401853
  119630
 GRCh38
 Duplication
 Yes
  kushima_18_SCZ_discovery_cases-caseSCZ0326
 42 yrs.
 M
 Schizophrenia
 No additional clinical information reported for this individual. Family history: unknown.
 
 57046622
 57092420
  45799
 GRCh38
 Deletion
 N/A
  kushima_18_SCZ_discovery_cases-caseSCZ1153
 55 yrs.
 M
 Schizophrenia
 No additional clinical information reported for this individual. Family history: unknown.
 
 57046622
 57088889
  42268
 GRCh38
 Deletion
 N/A
  laffin_12_CAS_discovery_cases-case11
 10-15 yrs.
 NA
 CAS
 Years of apraxia treatment: 8. Familial status: positive (one or more nuclear family members with a verbal trait disorder including speech disorder, language disorder, reading disorder, cognitive disability, or learning disability). Language impairment: impairments in language onset, comprehension, and expression. Motor impairment: impairment in oral-nonverbal motor assessment tasks.
 Cognitive impairment
 56638372
 57353219
  714848
 GRCh38
 Duplication
 No
  levy_11_ASD_discovery_cases-11356.p1
 NA
 F
 ASD
 NA
 NA
 52747187
 52827313
  80127
 GRCh38
 Deletion
 No
  mosca_16_DCD_discovery_cases-case124803
 N/A
 M
 DCD (with or without ADHD and/or RD)
 Ancestry: unknown. Family history: maternal diagnosis unknown; paternal diagnosis unknown.
 
 55533901
 55562749
  28849
 GRCh38
 Deletion
 No
  nava_13_ASD_discovery_cases-Fam1010Proband9713
 N/A
 M
 ASD
 Additional clinical profile info N/A
 ID
 52645867
 52747644
  101778
 GRCh38
 Deletion
 No
  o'roak_12_ASD_discovery_cases-case13415.p1
 NA
 M
 ASD/Autism
 Case also identified with de novo BRSK2 in-frame deletion mutation, de novo CNOT4 missense mutation, and de novo C9orf68 synonymous mutation. No additional clinical info available.
 Low IQ. Non verbal IQ, 48
 57047023
 57089752
  42730
 GRCh38
 Deletion
 Yes
  prasad_12_ASD_discovery_cases-case50089
 NA
 M
 ASD
 Diagnosis of ASD based on meeting criteria on ADI-R and/or ADOS. Novel CNV
 
 52664901
 52671398
  6498
 Unknown
 Deletion
 No
  prasad_12_ASD_discovery_cases-case60682L
 NA
 M
 ASD
 Diagnosis of ASD based on meeting criteria on ADI-R and/or ADOS. Novel CNV
 
 55714392
 55724485
  10094
 Unknown
 Deletion
 No
  sanders_11_ASD_discovery_cases-11057.p1
 8.7
 M
 Autism
 NA
 Full-scale IQ, 89; non-verbal IQ, 89; verbal IQ, 95
 55961339
 55997446
  36108
 GRCh38
 Deletion
 No
  sanders_11_ASD_discovery_cases-11063.p1
 9.3
 M
 Aspergers
 NA
 Full-scale IQ, 101; non-verbal IQ, 101; verbal IQ, 103
 55961339
 55984426
  23088
 GRCh38
 Deletion
 No
  sanders_11_ASD_discovery_cases-11080.p1
 5.1
 F
 ASD
 NA
 Full-scale IQ, 51; non-verbal IQ, 50; verbal IQ 66
 52747644
 52824710
  77067
 GRCh38
 Deletion
 No
  sanders_11_ASD_discovery_cases-11085.p1
 10.4
 M
 Autism
 NA
 Full-scale IQ, 61; non-verbal IQ, 68; verbal IQ, 51
 55961339
 55981729
  20391
 GRCh38
 Deletion
 No
  sanders_11_ASD_discovery_cases-11115.p1
 13.8
 F
 Autism
 NA
 Full-scale IQ, 37; non-verbal IQ, 46; verbal IQ, 19
 55961339
 55971820
  10482
 GRCh38
 Deletion
 No
  sanders_11_ASD_discovery_cases-11265.p1
 14.3
 M
 Aspergers
 NA
 Full-scale IQ, 106; non-verbal IQ, 98; verbal IQ, 120
 55959215
 55984426
  25212
 GRCh38
 Deletion
 No
  sanders_11_ASD_discovery_cases-11291.p1
 4.8
 M
 Autism
 NA
 Full-scale IQ, 86; non-verbal IQ, 83; verbal IQ, 99
 55959215
 55981729
  22515
 GRCh38
 Deletion
 No
  sanders_11_ASD_discovery_cases-11300.p1
 10.1
 M
 Autism
 NA
 Full-scale IQ, 96; non-verbal IQ, 97; verbal IQ, 94
 55961339
 55981729
  20391
 GRCh38
 Deletion
 No
  sanders_11_ASD_discovery_cases-11323.p1
 8.6
 F
 Autism
 NA
 Full-scale IQ, 109; non-verbal IQ, 114; verbal IQ, 98
 55961339
 55984426
  23088
 GRCh38
 Deletion
 No
  sanders_11_ASD_discovery_cases-11336.p1
 10.4
 M
 Autism
 NA
 Full-scale IQ, 123; non-verbal IQ, 124; verbal IQ, 114
 55961339
 55981729
  20391
 GRCh38
 Deletion
 No
  sanders_11_ASD_discovery_cases-11356.p1
 11.5
 F
 Autism
 NA
 Full-scale IQ, 72; non-verbal IQ, 72; verbal IQ, 77
 52747644
 52829912
  82269
 GRCh38
 Deletion
 No
  sanders_11_ASD_discovery_cases-11367.p1
 7.6
 M
 Aspergers
 NA
 Full-scale IQ, 115; non-verbal IQ, 119; verbal IQ, 119
 55961339
 55981729
  20391
 GRCh38
 Deletion
 No
  sanders_11_ASD_discovery_cases-11368.p1
 5.9
 M
 Autism
 NA
 Full-scale IQ, 89; non-verbal IQ, 89; verbal IQ, 95
 55961339
 55981729
  20391
 GRCh38
 Deletion
 No
  sanders_11_ASD_discovery_cases-11425.p1
 9.7
 M
 Autism
 NA
 Full-scale IQ, 103; non-verbal IQ, 104; verbal IQ, 102
 57048655
 57089752
  41098
 GRCh38
 Duplication
 No
  sanders_11_ASD_discovery_cases-11437.p1
 16.6
 M
 Autism
 NA
 Full-scale IQ, 82; non-verbal IQ, 102; verbal IQ, 65
 52747644
 52824710
  77067
 GRCh38
 Deletion
 No
  sanders_11_ASD_discovery_cases-11463.p1
 7.6
 M
 Autism
 NA
 Full-scale IQ, 88; non-verbal IQ, 98; verbal IQ, 79
 55961339
 55981729
  20391
 GRCh38
 Deletion
 No
  sanders_11_ASD_discovery_cases-11468.p1
 10.7
 M
 Aspergers
 NA
 Full-scale IQ, 89; non-verbal IQ, 92; verbal IQ, 87
 57048655
 57089752
  41098
 GRCh38
 Duplication
 No
  sanders_11_ASD_discovery_cases-11488.p1
 11
 M
 Autism
 NA
 Full-scale IQ, 91; non-verbal IQ, 99; verbal IQ, 80
 55959215
 55984426
  25212
 GRCh38
 Deletion
 No
  sanders_11_ASD_discovery_cases-11522.p1
 11.3
 M
 Autism
 NA
 Full-scale IQ, 67; non-verbal IQ, 79; verbal IQ, 60
 55959215
 55984426
  25212
 GRCh38
 Deletion
 No
  sanders_11_ASD_discovery_cases-11597.p1
 12.3
 M
 Autism
 NA
 Full-scale IQ, 130; non-verbal IQ, 118; verbal IQ, 128
 52759009
 52797304
  38296
 GRCh38
 Deletion
 No
  sanders_11_ASD_discovery_cases-11600.p1
 14.8
 M
 Autism
 NA
 Full-scale IQ, 101; non-verbal IQ, 112; verbal IQ, 99
 55961339
 55981729
  20391
 GRCh38
 Deletion
 No
  sanders_11_ASD_discovery_cases-11615.p1
 12.6
 M
 Autism
 NA
 Full-scale IQ, 83; non-verbal IQ, 83; verbal IQ, 89
 55961339
 55981729
  20391
 GRCh38
 Deletion
 No
  sanders_11_ASD_discovery_cases-11625.p1
 11.6
 M
 Autism
 NA
 Full-scale IQ, 34; non-verbal IQ, 44; verbal IQ, 14
 55059679
 55087120
  27442
 GRCh38
 Deletion
 No
  sanders_11_ASD_discovery_cases-11693.p1
 5.3
 M
 Autism
 NA
 Full-scale IQ, 78; non-verbal IQ, 76; verbal IQ, 88
 55961339
 55981729
  20391
 GRCh38
 Deletion
 No
  sanders_11_ASD_discovery_cases-11811.p1
 16.9
 M
 Autism
 NA
 Full-scale IQ, 77; non-verbal IQ, 79; verbal IQ, 80
 55961339
 55981729
  20391
 GRCh38
 Deletion
 No
  sanders_11_ASD_discovery_cases-11843.p1
 14.3
 F
 Autism
 NA
 Full-scale IQ, 115; non-verbal IQ, 113; verbal IQ, 117
 55959215
 55981729
  22515
 GRCh38
 Deletion
 No
  sanders_11_ASD_discovery_cases-11878.p1
 9.5
 M
 Autism
 NA
 Full-scale IQ, 78; non-verbal IQ, 72; verbal IQ, 94
 52759009
 52797304
  38296
 GRCh38
 Deletion
 No
  sanders_11_ASD_discovery_cases-12007.p1
 8.7
 F
 Autism
 NA
 Full-scale IQ, 64; non-verbal IQ, 54; verbal IQ, 83
 55961339
 55981729
  20391
 GRCh38
 Deletion
 No
  sanders_11_ASD_discovery_cases-12031.p1
 13.5
 M
 Autism
 NA
 Full-scale IQ, 123; non-verbal IQ, 108; verbal IQ, 133
 55961339
 55981729
  20391
 GRCh38
 Deletion
 No
  sanders_11_ASD_discovery_cases-12106.p1
 9.3
 M
 Autism
 NA
 Full-scale IQ, 112; non-verbal IQ, 110; verbal IQ, 113
 57052740
 57089752
  37013
 GRCh38
 Duplication
 No
  sanders_11_ASD_discovery_cases-12154.p1
 4
 M
 Autism
 NA
 Full-scale IQ, 90; non-verbal IQ, 95; verbal IQ, 87
 55961339
 55997446
  36108
 GRCh38
 Deletion
 No
  sanders_11_ASD_discovery_cases-12211.p1
 6.2
 F
 Autism
 NA
 Full-scale IQ, 62; non-verbal IQ, 57; verbal IQ, 82
 55961339
 55981729
  20391
 GRCh38
 Deletion
 No
  sanders_11_ASD_discovery_cases-12272.p1
 5.4
 M
 Autism
 NA
 Full-scale IQ, 70; non-verbal IQ, 79; verbal IQ, 62
 55693935
 55735055
  41121
 GRCh38
 Deletion
 No
  sanders_11_ASD_discovery_cases-12295.p1
 15.6
 M
 Autism
 NA
 Full-scale IQ, 104; non-verbal IQ, 110; verbal IQ, 93
 55961339
 55981729
  20391
 GRCh38
 Deletion
 No
  sanders_11_ASD_discovery_cases-12299.p1
 6.3
 M
 Autism
 NA
 Full-scale IQ, 118; non-verbal IQ, 113; verbal IQ, 125
 55961339
 55981729
  20391
 GRCh38
 Deletion
 No
  sanders_11_ASD_discovery_cases-12341.p1
 13.8
 M
 Autism
 NA
 Full-scale IQ, 109; non-verbal IQ, 117; verbal IQ, 114
 55960697
 55981729
  21033
 GRCh38
 Deletion
 No
  sanders_11_ASD_discovery_cases-12359.p1
 9.3
 M
 Autism
 NA
 Full-scale IQ, 78; non-verbal IQ, 87; verbal IQ, 69
 55370560
 55378351
  7792
 GRCh38
 Deletion
 No
  sanders_11_ASD_discovery_cases-12360.p1
 6.8
 M
 Autism
 NA
 Full-scale IQ, 104; non-verbal IQ, 104; verbal IQ, 101
 55961339
 55981729
  20391
 GRCh38
 Deletion
 No
  sanders_11_ASD_discovery_cases-12383.p1
 9
 M
 Autism
 NA
 Full-scale IQ, 101; non-verbal IQ, 88; verbal IQ, 90
 55961339
 55981729
  20391
 GRCh38
 Deletion
 No
  sanders_11_ASD_discovery_cases-12494.p1
 7.9
 M
 Autism
 NA
 Full-scale IQ, 59; non-verbal IQ, 67; verbal IQ, 56
 55961339
 55981729
  20391
 GRCh38
 Deletion
 No
  sanders_11_ASD_discovery_cases-12536.p1
 5.9
 M
 Autism
 NA
 Full-scale IQ, 85; non-verbal IQ, 90; verbal IQ, 81
 55961339
 55981729
  20391
 GRCh38
 Deletion
 No
  sanders_11_ASD_discovery_cases-12596.p1
 4.9
 M
 Autism
 NA
 Full-scale IQ, 61; non-verbal IQ, 89; verbal IQ, 32
 54354528
 54560139
  205612
 GRCh38
 Deletion
 No
  sanders_11_ASD_discovery_cases-12761.p1
 5.4
 M
 Autism
 NA
 Full-scale IQ, 102; non-verbal IQ, 109; verbal IQ, 89
 55961339
 55981729
  20391
 GRCh38
 Deletion
 No
  sanders_11_ASD_discovery_cases-12924.p1
 5.5
 F
 Autism
 NA
 Full-scale IQ, 104; non-verbal IQ, 117; verbal IQ, 81
 55961339
 55981729
  20391
 GRCh38
 Deletion
 No
  sanders_11_ASD_discovery_cases-12937.p1
 17.3
 M
 Autism
 NA
 Full-scale IQ, 35; non-verbal IQ, 40; verbal IQ, 26
 55961339
 55981729
  20391
 GRCh38
 Deletion
 No
  sanders_11_ASD_discovery_cases-12948.p1
 17.9
 F
 Autism
 NA
 Full-scale IQ, 65; non-verbal IQ, 57; verbal IQ, 81
 55961339
 55981729
  20391
 GRCh38
 Deletion
 No
  sanders_11_ASD_discovery_cases-12962.p1
 11.3
 M
 Autism
 NA
 Full-scale IQ, 79; non-verbal IQ, 82; verbal IQ, 78
 53990691
 54000869
  10179
 GRCh38
 Deletion
 No
  sanders_11_ASD_discovery_cases-13016.p1
 5.5
 M
 Aspergers
 NA
 Full-scale IQ, 98; non-verbal IQ, 102; verbal IQ, 93
 55961339
 55981729
  20391
 GRCh38
 Deletion
 No
  sanders_11_ASD_discovery_cases-13120.p1
 8
 M
 Autism
 NA
 Full-scale IQ, 113; non-verbal IQ, 109; verbal IQ, 118
 55961339
 55981729
  20391
 GRCh38
 Deletion
 No
  sanders_11_ASD_discovery_cases-13171.p1
 7.9
 F
 Autism
 NA
 Full-scale IQ, 51; non-verbal IQ, 59; verbal IQ, 45
 55961339
 55981729
  20391
 GRCh38
 Deletion
 No
  sanders_11_ASD_discovery_cases-13244.p1
 15.7
 M
 Autism
 NA
 Full-scale IQ, 68; non-verbal IQ, 74; verbal IQ, 63
 55961339
 55981729
  20391
 GRCh38
 Deletion
 No
  sanders_11_ASD_discovery_cases-13322.p1
 16.9
 M
 Autism
 NA
 Full-scale IQ, 59; non-verbal IQ, 62; verbal IQ, 56
 52759009
 52797304
  38296
 GRCh38
 Deletion
 No
  vaags_11_ASD_discovery_cases-probandF2-003
 3 yrs. 5 mos.
 M
 Autism
 Diagnosis of autism based on ADI-R and ADOS-1. Language: Oral and Written Language Scales/OWLS, incomplete; Peabody Picture Vocabulary Test/PPVT-4, SS = 67 (<1%). Adaptive Behavior (measured by VABS-II): adaptive behavior composite (ABC) = 61 (<1%), communication (COM) = 63 (1%), daily living skills (DLS) = 60 (<1%), socialization (SOC) = 59 (<1%), and motor skills (MOT) = 72 (3%). Born at 31 weeks, asthma, juvenile arthritis. Family history: proband was one of three trizygotic triplets; sister with autism & nonabsent seizures (has NRXN3 deletion).
 Leiter-R IQ: incomplete (test attempted but proband failed to complete)
 55961339
 55981729
  20391
 GRCh38
 Deletion
 No

Controls

Patient ID
Author, Year
Age
Gender
Primary Diagnosis
Clinical Profile
Cognitive Profile
CNV Start
CNV End
CNV Size
Genome Build
Type Method
Validation
  bacchelli_20_ASD_discovery_controls-control10011
  N/A
  F
  Control
  Control
 
  57039819
  57056006
  16188
  GRCh38
  Duplication
  No
  bacchelli_20_ASD_discovery_controls-control20039
  N/A
  M
  Control
  Control
 
  57052710
  57083384
  30675
  GRCh38
  Deletion
  No
  engchuan_15_ASD_discovery_controls-control110036004877_
  N/A
  N/A
  Control
  No previous psychiatric history
 
  55961339
  56021776
  60438
  GRCh38
  Deletion
  No
  engchuan_15_ASD_discovery_controls-control110036021087_
  N/A
  N/A
  Control
  No previous psychiatric history
 
  57048655
  57089752
  41098
  GRCh38
  Deletion
  No
  engchuan_15_ASD_discovery_controls-control110036021954_
  N/A
  N/A
  Control
  No previous psychiatric history
 
  55951929
  55984426
  32498
  GRCh38
  Deletion
  No
  engchuan_15_ASD_discovery_controls-controlB100331_1007873991
  N/A
  N/A
  Control
  No previous psychiatric history
 
  57048655
  57095814
  47160
  GRCh38
  Deletion
  No
  engchuan_15_ASD_discovery_controls-controlB107311_1007871675
  N/A
  N/A
  Control
  No previous psychiatric history
 
  55830578
  55869422
  38845
  GRCh38
  Deletion
  No
  engchuan_15_ASD_discovery_controls-controlB257988_1007841389
  N/A
  N/A
  Control
  No previous psychiatric history
 
  55961339
  55997446
  36108
  GRCh38
  Deletion
  No
  engchuan_15_ASD_discovery_controls-controlB266791_1007871681
  N/A
  N/A
  Control
  No previous psychiatric history
 
  55961339
  55997446
  36108
  GRCh38
  Deletion
  No
  engchuan_15_ASD_discovery_controls-controlB404952_1007854757
  N/A
  N/A
  Control
  No previous psychiatric history
 
  52747644
  52824710
  77067
  GRCh38
  Deletion
  No
  engchuan_15_ASD_discovery_controls-controlB431062_1007840503
  N/A
  N/A
  Control
  No previous psychiatric history
 
  55961339
  55997446
  36108
  GRCh38
  Deletion
  No
  engchuan_15_ASD_discovery_controls-controlB431282_1007873513
  N/A
  N/A
  Control
  No previous psychiatric history
 
  55959215
  55997446
  38232
  GRCh38
  Deletion
  No
  engchuan_15_ASD_discovery_controls-controlB487470_1007873444
  N/A
  N/A
  Control
  No previous psychiatric history
 
  55961339
  55997446
  36108
  GRCh38
  Deletion
  No
  engchuan_15_ASD_discovery_controls-controlB532470_1007875811
  N/A
  N/A
  Control
  No previous psychiatric history
 
  55959215
  56010468
  51254
  GRCh38
  Deletion
  No
  engchuan_15_ASD_discovery_controls-controlB549487_1007840956
  N/A
  N/A
  Control
  No previous psychiatric history
 
  55961339
  55997446
  36108
  GRCh38
  Deletion
  No
  engchuan_15_ASD_discovery_controls-controlB585576_1007875272
  N/A
  N/A
  Control
  No previous psychiatric history
 
  55961339
  55997446
  36108
  GRCh38
  Deletion
  No
  engchuan_15_ASD_discovery_controls-controlB647746_1007873514
  N/A
  N/A
  Control
  No previous psychiatric history
 
  57048655
  57093298
  44644
  GRCh38
  Deletion
  No
  engchuan_15_ASD_discovery_controls-controlB666611_1007875265
  N/A
  N/A
  Control
  No previous psychiatric history
 
  55961339
  55997446
  36108
  GRCh38
  Deletion
  No
  engchuan_15_ASD_discovery_controls-controlB697807_1007852545
  N/A
  N/A
  Control
  No previous psychiatric history
 
  55959215
  56010468
  51254
  GRCh38
  Deletion
  No
  engchuan_15_ASD_discovery_controls-controlB759914_1007846064
  N/A
  N/A
  Control
  No previous psychiatric history
 
  55961339
  55997446
  36108
  GRCh38
  Deletion
  No
  engchuan_15_ASD_discovery_controls-controlB764705_1007853643
  N/A
  N/A
  Control
  No previous psychiatric history
 
  57048655
  57089752
  41098
  GRCh38
  Deletion
  No
  engchuan_15_ASD_discovery_controls-controlB771183_1007874859
  N/A
  N/A
  Control
  No previous psychiatric history
 
  57048655
  57089752
  41098
  GRCh38
  Duplication
  No
  engchuan_15_ASD_discovery_controls-controlB791991_1007852595
  N/A
  N/A
  Control
  No previous psychiatric history
 
  55961339
  55997446
  36108
  GRCh38
  Deletion
  No
  engchuan_15_ASD_discovery_controls-controlB826617_0067942631
  N/A
  N/A
  Control
  No previous psychiatric history
 
  55959215
  56010468
  51254
  GRCh38
  Deletion
  No
  engchuan_15_ASD_discovery_controls-controlB830766_1007854715
  N/A
  N/A
  Control
  No previous psychiatric history
 
  55961339
  55997446
  36108
  GRCh38
  Deletion
  No
  engchuan_15_ASD_discovery_controls-controlB841482_1007854027
  N/A
  N/A
  Control
  No previous psychiatric history
 
  55961339
  55997446
  36108
  GRCh38
  Deletion
  No
  engchuan_15_ASD_discovery_controls-controlB855640_1007853300
  N/A
  N/A
  Control
  No previous psychiatric history
 
  55960697
  55997446
  36750
  GRCh38
  Deletion
  No
  engchuan_15_ASD_discovery_controls-controlB911786_1007854079
  N/A
  N/A
  Control
  No previous psychiatric history
 
  55959215
  55997446
  38232
  GRCh38
  Deletion
  No
  engchuan_15_ASD_discovery_controls-controlB916240_1007854325
  N/A
  N/A
  Control
  No previous psychiatric history
 
  55959215
  55997446
  38232
  GRCh38
  Deletion
  No
  engchuan_15_ASD_discovery_controls-controlB984152_1007842480
  N/A
  N/A
  Control
  No previous psychiatric history
 
  55961339
  55997446
  36108
  GRCh38
  Deletion
  No
  engchuan_15_ASD_discovery_controls-controlHABC_900067_900067
  N/A
  N/A
  Control
  No previous psychiatric history
 
  52747644
  52824710
  77067
  GRCh38
  Deletion
  No
  engchuan_15_ASD_discovery_controls-controlHABC_900293_900293
  N/A
  N/A
  Control
  No previous psychiatric history
 
  52747644
  52824710
  77067
  GRCh38
  Deletion
  No
  engchuan_15_ASD_discovery_controls-controlHABC_900599_900599
  N/A
  N/A
  Control
  No previous psychiatric history
 
  57048655
  57089720
  41066
  GRCh38
  Duplication
  No
  engchuan_15_ASD_discovery_controls-controlHABC_900773_900773
  N/A
  N/A
  Control
  No previous psychiatric history
 
  57048655
  57089752
  41098
  GRCh38
  Duplication
  No
  engchuan_15_ASD_discovery_controls-controlHABC_901195_901195
  N/A
  N/A
  Control
  No previous psychiatric history
 
  56361235
  56407888
  46654
  GRCh38
  Duplication
  No
  engchuan_15_ASD_discovery_controls-controlHABC_902662_902662
  N/A
  N/A
  Control
  No previous psychiatric history
 
  57048655
  57089752
  41098
  GRCh38
  Deletion
  No
  girirajan_13a_ASD_discovery_controls1-control5
  N/A
  N/A
  Control
  N/A
  N/A
  57047023
  57091703
  44681
  GRCh38
  Deletion
  No
  girirajan_13a_ASD_discovery_controls2-control31
  N/A
  N/A
  Control
  N/A
  N/A
  N/A
  N/A
  N/A
  NCBI36
  Deletion
  No
  krumm_13_ASD_discovery_controls-control12106.s1
  N/A
  F
  Control
  Unaffected sibling from SSC quad family 12106. SRS score of 56.
 
  57050773
  57054863
  4091
  GRCh38
  Duplication
  Yes
  krumm_15_ASD_discovery_controls-control11933.s1
  N/A
  Male
  Control
  Unaffected sibling from the Simons Simplex Collection (SSC)
 
  57046716
  57099153
  52438
  GRCh38
  Duplication
  Yes
  krumm_15_ASD_discovery_controls-control12786.s1
  N/A
  Male
  Control
  Unaffected sibling from the Simons Simplex Collection (SSC)
 
  54121446
  54354636
  233191
  GRCh38
  Deletion
  Yes
  krumm_15_ASD_discovery_controls-control13129.s1
  N/A
  Female
  Control
  Unaffected sibling from the Simons Simplex Collection (SSC)
 
  57050763
  57090316
  39554
  GRCh38
  Deletion
  Yes
  krumm_15_ASD_discovery_controls-control13968.s1
  N/A
  Male
  Control
  Unaffected sibling from the Simons Simplex Collection (SSC)
 
  55327554
  55359138
  31585
  GRCh38
  Duplication
  Yes
  sanders_11_ASD_discovery_controls-11057.s1
  5.9
  M
  Control (matched sibling)
  NA
  NA
  55961339
  55971820
  10482
  GRCh38
  Deletion
  No
  sanders_11_ASD_discovery_controls-11059.s1
  9.3
  F
  Control (matched sibling)
  NA
  NA
  55959215
  55984426
  25212
  GRCh38
  Deletion
  No
  sanders_11_ASD_discovery_controls-11063.s1
  7.3
  M
  Control (matched sibling)
  NA
  NA
  55959215
  55997446
  38232
  GRCh38
  Deletion
  No
  sanders_11_ASD_discovery_controls-11086.s1
  9.3
  M
  Control (matched sibling)
  NA
  NA
  55961339
  55981729
  20391
  GRCh38
  Deletion
  No
  sanders_11_ASD_discovery_controls-11115.s1
  15.8
  F
  Control (matched sibling)
  NA
  NA
  55961339
  55981729
  20391
  GRCh38
  Deletion
  No
  sanders_11_ASD_discovery_controls-11156.s1
  10.3
  M
  Control (matched sibling)
  NA
  NA
  57048655
  57089752
  41098
  GRCh38
  Deletion
  No
  sanders_11_ASD_discovery_controls-11229.s1
  6.1
  M
  Control (matched sibling)
  NA
  NA
  55961339
  55981729
  20391
  GRCh38
  Deletion
  No
  sanders_11_ASD_discovery_controls-11265.s1
  0
  F
  Control (matched sibling)
  NA
  NA
  55961339
  55981729
  20391
  GRCh38
  Deletion
  No
  sanders_11_ASD_discovery_controls-11300.s1
  8
  M
  Control (matched sibling)
  NA
  NA
  55961339
  55981729
  20391
  GRCh38
  Deletion
  No
  sanders_11_ASD_discovery_controls-11336.s1
  12.9
  F
  Control (matched sibling)
  NA
  NA
  55959215
  55984426
  25212
  GRCh38
  Deletion
  No
  sanders_11_ASD_discovery_controls-11368.s1
  8.1
  F
  Control (matched sibling)
  NA
  NA
  55961339
  55981729
  20391
  GRCh38
  Deletion
  No
  sanders_11_ASD_discovery_controls-11488.s1
  7.7
  M
  Control (matched sibling)
  NA
  NA
  55961339
  55981729
  20391
  GRCh38
  Deletion
  No
  sanders_11_ASD_discovery_controls-11511.s1
  9
  M
  Control (matched sibling)
  NA
  NA
  55961339
  55981729
  20391
  GRCh38
  Deletion
  No
  sanders_11_ASD_discovery_controls-11526.s1
  7.9
  F
  Control (matched sibling)
  NA
  NA
  57048655
  57093298
  44644
  GRCh38
  Deletion
  No
  sanders_11_ASD_discovery_controls-11597.s1
  9
  M
  Control (matched sibling)
  NA
  NA
  52759009
  52799015
  40007
  GRCh38
  Deletion
  No
  sanders_11_ASD_discovery_controls-11615.s1
  10.7
  F
  Control (matched sibling)
  NA
  NA
  55961339
  55981729
  20391
  GRCh38
  Deletion
  No
  sanders_11_ASD_discovery_controls-11625.s1
  17.3
  M
  Control (matched sibling)
  NA
  NA
  55059679
  55087120
  27442
  GRCh38
  Deletion
  No
  sanders_11_ASD_discovery_controls-11654.s1
  6.3
  F
  Control (matched sibling)
  NA
  NA
  57048655
  57093298
  44644
  GRCh38
  Deletion
  No
  sanders_11_ASD_discovery_controls-12007.s1
  10.9
  M
  Control (matched sibling)
  NA
  NA
  55961339
  55981729
  20391
  GRCh38
  Deletion
  No
  sanders_11_ASD_discovery_controls-12106.s1
  10.9
  F
  Control (matched sibling)
  NA
  NA
  57052740
  57089752
  37013
  GRCh38
  Duplication
  No
  sanders_11_ASD_discovery_controls-12197.s1
  5.8
  F
  Control (matched sibling)
  NA
  NA
  55960697
  55981729
  21033
  GRCh38
  Deletion
  No
  sanders_11_ASD_discovery_controls-12359.s1
  6.3
  F
  Control (matched sibling)
  NA
  NA
  55370560
  55378351
  7792
  GRCh38
  Deletion
  No
  sanders_11_ASD_discovery_controls-12424.s1
  6.2
  F
  Control (matched sibling)
  NA
  NA
  55961339
  55981729
  20391
  GRCh38
  Deletion
  No
  sanders_11_ASD_discovery_controls-12494.s1
  11
  F
  Control (matched sibling)
  NA
  NA
  55961339
  55981729
  20391
  GRCh38
  Deletion
  No
  sanders_11_ASD_discovery_controls-12517.s1
  11.7
  M
  Control (matched sibling)
  NA
  NA
  55961339
  55981729
  20391
  GRCh38
  Deletion
  No
  sanders_11_ASD_discovery_controls-12536.s1
  4.9
  F
  Control (matched sibling)
  NA
  NA
  55961339
  55981729
  20391
  GRCh38
  Deletion
  No
  sanders_11_ASD_discovery_controls-12578.s1
  8.8
  F
  Control (matched sibling)
  NA
  NA
  55961339
  55981729
  20391
  GRCh38
  Deletion
  No
  sanders_11_ASD_discovery_controls-12596.s1
  6.3
  F
  Control (matched sibling)
  NA
  NA
  54355397
  54561078
  205682
  GRCh38
  Deletion
  No
  sanders_11_ASD_discovery_controls-12602.s1
  6.8
  F
  Control (matched sibling)
  NA
  NA
  55961339
  55981729
  20391
  GRCh38
  Deletion
  No
  sanders_11_ASD_discovery_controls-12784.s1
  8.4
  M
  Control (matched sibling)
  NA
  NA
  55961339
  55981729
  20391
  GRCh38
  Deletion
  No
  sanders_11_ASD_discovery_controls-12786.s1
  4.9
  M
  Control (matched sibling)
  NA
  NA
  55961339
  55981729
  20391
  GRCh38
  Deletion
  No
  sanders_11_ASD_discovery_controls-12786.s1
  4.9
  M
  Control (matched sibling)
  NA
  NA
  54046858
  54380650
  333793
  GRCh38
  Deletion
  No
  sanders_11_ASD_discovery_controls-12962.s1
  8.3
  F
  Control (matched sibling)
  NA
  NA
  53990691
  54000869
  10179
  GRCh38
  Deletion
  No
  sanders_11_ASD_discovery_controls-13036.s1
  10.2
  F
  Control (matched sibling)
  NA
  NA
  52759009
  52797304
  38296
  GRCh38
  Deletion
  No
  sanders_11_ASD_discovery_controls-13120.s1
  6.2
  M
  Control (matched sibling)
  NA
  NA
  55961339
  55981729
  20391
  GRCh38
  Deletion
  No
  sanders_11_ASD_discovery_controls-13171.s1
  11.3
  F
  Control (matched sibling)
  NA
  NA
  55961339
  55981729
  20391
  GRCh38
  Deletion
  No
  sanders_11_ASD_discovery_controls-13196.s1
  12.1
  M
  Control (matched sibling)
  NA
  NA
  55961339
  55981729
  20391
  GRCh38
  Deletion
  No
  sanders_11_ASD_discovery_controls-13322.s1
  14.3
  F
  Control (matched sibling)
  NA
  NA
  52759009
  52797304
  38296
  GRCh38
  Deletion
  No

Cases

Patient ID
Validation Description
Primary Disorder Inheritence
Inheritence
Family Profile
Disease Segregation
Gene Content
Altered Gene Expression
 celestino-soper_11_ASD_discovery_cases-11291
 
 
 Unknown
 Simplex
 NA
 HMGCLL1
 
 engchuan_15_ASD_discovery_cases-case1050_3
 
 
 Unknown
 
 
 KIAA1586,ZNF451
 
 engchuan_15_ASD_discovery_cases-case13117_1343
 
 
 Unknown
 
 
 GSTA1,GSTA2,GSTA12P,GSTA6P
 
 engchuan_15_ASD_discovery_cases-case13145_1623
 
 
 Unknown
 
 
 
 
 engchuan_15_ASD_discovery_cases-case14032_600
 
 
 Unknown
 
 
 
 
 engchuan_15_ASD_discovery_cases-case14169_2750
 
 
 Unknown
 
 
 
 
 engchuan_15_ASD_discovery_cases-case14201_3250
 
 
 Unknown
 
 
 
 
 engchuan_15_ASD_discovery_cases-case14265_3880
 
 
 Unknown
 
 
 KIAA1586,ZNF451
 
 engchuan_15_ASD_discovery_cases-case14308_4250
 
 
 Unknown
 
 
 KIAA1586,ZNF451
 
 engchuan_15_ASD_discovery_cases-case16067_1571134001
 
 
 Unknown
 
 
 GSTA1,GSTA2,GSTA12P,GSTA6P
 
 engchuan_15_ASD_discovery_cases-case3031_4
 
 
 Unknown
 
 
 
 
 engchuan_15_ASD_discovery_cases-case3077_4
 
 
 Unknown
 
 
 
 
 engchuan_15_ASD_discovery_cases-case3095_3
 
 
 Unknown
 
 
 
 
 engchuan_15_ASD_discovery_cases-case3174_3
 
 
 Unknown
 
 
 
 
 engchuan_15_ASD_discovery_cases-case4145_1
 
 
 Unknown
 
 
 
 
 engchuan_15_ASD_discovery_cases-case4299_1
 
 
 Unknown
 
 
 KIAA1586,ZNF451
 
 engchuan_15_ASD_discovery_cases-case4319_1
 
 
 Unknown
 
 
 
 
 engchuan_15_ASD_discovery_cases-case4430_1
 
 
 Unknown
 
 
 
 
 engchuan_15_ASD_discovery_cases-case4448_100
 
 
 Unknown
 
 
 
 
 engchuan_15_ASD_discovery_cases-case4461_1
 
 
 Unknown
 
 
 
 
 engchuan_15_ASD_discovery_cases-case4509_1
 
 
 Unknown
 
 
 
 
 engchuan_15_ASD_discovery_cases-case4526_1
 
 
 Unknown
 
 
 
 
 engchuan_15_ASD_discovery_cases-case5131_3
 
 
 Unknown
 
 
 KIAA1586,ZNF451
 
 engchuan_15_ASD_discovery_cases-case5469_3
 
 
 Unknown
 
 
 
 
 engchuan_15_ASD_discovery_cases-case6125_4
 
 
 Unknown
 
 
 FAM83B
 
 engchuan_15_ASD_discovery_cases-case6245_4
 
 
 Unknown
 
 
 
 
 engchuan_15_ASD_discovery_cases-case6300_3
 
 
 Unknown
 
 
 KIAA1586,ZNF451
 
 engchuan_15_ASD_discovery_cases-case8048_202
 
 
 Unknown
 
 
 KIAA1586,ZNF451
 
 gillentine_16_ASD/ADHD/DD/ID_discovery_cases-patient16
 
 
 Maternal
 Multi-generational
 Unknown
 CLNS1AP1,RPL10P10,RPSAP44,KRASP1,RNU6-1023P,TINAG,GFRAL,FAM83B,HCRTR2,HMGCLL1
 
 girirajan_13a_ASD_discovery_cases-11425.p1
 aCGH (NimbleGen 135K array)
 
 Paternal
 Simplex
 Unknown
 KIAA1586,ZNF451
 
 girirajan_13a_ASD_discovery_cases-11468.p1
 aCGH (NimbleGen 135K array)
 
 Paternal
 Simplex
 Unknown
 KIAA1586,ZNF451
 
 girirajan_13a_ASD_discovery_cases-11933.p1
 
 
 Unknown
 Simplex
 Unknown
 KIAA1586,ZNF451
 
 girirajan_13a_ASD_discovery_cases-12106.p1
 aCGH (NimbleGen 135K array)
 
 Paternal
 Simplex
 Unknown
 KIAA1586,ZNF451
 
 girirajan_13a_ASD_discovery_cases-13415.p1
 aCGH (NimbleGen 135K array)
 
 Paternal
 Simplex
 Unknown
 KIAA1586,ZNF451
 
 girirajan_13a_ASD_discovery_cases-13865.p1
 aCGH (NimbleGen 135K array)
 
 Maternal
 Simplex
 Unknown
 KIAA1586,ZNF451
 
 girirajan_13a_ASD_discovery_cases-AU1187301
 aCGH (NimbleGen 135K array)
 
 Paternal
 Multiplex
 Unknown
 KIAA1586,ZNF451
 
 girirajan_13a_ASD_discovery_cases-AU1559301
 aCGH (NimbleGen 135K array)
 
 Maternal
 Multiplex
 Unknown
 KIAA1586,ZNF451
 
 kaminsky_11_DD/ID/ASD_discovery_cases-ISCA00002241
 FISH, qPCR, MLPA, aCGH, or standard G-banded chromosome analysis
 
 Unknown
 Unknown
 Unknown
 CLNS1AP1,RPL10P10,RPSAP44,KRASP1,RNU6-1023P,NPM1P36,DHFRP6,RCC2P7,TINAG,GFRAL,MLIP,FAM83B,HCRTR2,BMP5,COL21A1,HMGCLL1,DST
 
 kaminsky_11_DD/ID/ASD_discovery_cases-ISCA00005173
 FISH, qPCR, MLPA, aCGH, or standard G-banded chromosome analysis
 
 Unknown
 Unknown
 Unknown
 ERHP2,CLNS1AP1,TINAG,MLIP,MLIP-AS1,MLIP-IT1
 
 krumm_13_ASD_discovery_cases-case12106.p1
 
 
 Paternal
 Simplex
 Not segregated
 KIAA1586
 
 krumm_15_ASD_discovery_cases-case11425.p1
 Illumina 1M
 
 Paternal
 Simplex
 Segregated
 KIAA1586
 
 krumm_15_ASD_discovery_cases-case11468.p1
 Illumina 1M
 
 Paternal
 Simplex
 Segregated
 KIAA1586,ZNF451
 
 krumm_15_ASD_discovery_cases-case11933.p1
 Illumina 1MDuo
 
 Paternal
 Simplex
 Not segregated (CNV in unaffected sibling)
 KIAA1586,ZNF451
 
 krumm_15_ASD_discovery_cases-case12106.p1
 Illumina 1MDuo
 
 Paternal
 Simplex
 Segregated
 KIAA1586,ZNF451
 
 krumm_15_ASD_discovery_cases-case13822.p1
 Omni2.5-4v1
 
 Maternal
 Simplex
 Segregated
 GFRAL,HCRTR2
 
 kushima_18_SCZ_discovery_cases-caseSCZ0326
 While a subset of CNVs were reported to have been validated by qPCR in the report, precisely which CNVs were validated was not reported
 
 Unknown
 Unknown
 
 KIAA1586,ZNF451
 
 kushima_18_SCZ_discovery_cases-caseSCZ1153
 While a subset of CNVs were reported to have been validated by qPCR in the report, precisely which CNVs were validated was not reported
 
 Unknown
 Unknown
 Unknown
 KIAA1586,ZNF451
 
 laffin_12_CAS_discovery_cases-case11
 
 
 Unknown
 Multiplex
 Unknown
 RPL17P26,RNU6-626P,OSTCP6,FTH1P15,MRPL30P1,KIAA1586,BAG2,RAB23,BEND6,ZNF451,ZNF451-AS1,PRIM2,DST
 
 levy_11_ASD_discovery_cases-11356.p1
 
 
 Maternal
 Simplex
 Segregated
 GSTA1,GSTA2,GSTA12P,GSTA6P
 
 mosca_16_DCD_discovery_cases-case124803
 
 
 Unknown
 Unknown
 Unknown
 HMGCLL1
 
 nava_13_ASD_discovery_cases-Fam1010Proband9713
 
 
 Unknown
 Simplex
 Unknown
 TMEM14A,GSTA7P,GSTA8P
 
 o'roak_12_ASD_discovery_cases-case13415.p1
 aCGH, Sanger sequencing
 
 Paternal
 Simplex (quad)
 Unknown
 KIAA1586,ZNF451
 
 prasad_12_ASD_discovery_cases-case50089
 
 
 Unknown
 Unknown
 Unknown
 0 genes
 
 prasad_12_ASD_discovery_cases-case60682L
 
 
 Unknown
 Unknown
 Unknown
 0 genes
 
 sanders_11_ASD_discovery_cases-11057.p1
 
 
 Paternal
 Simplex (quad-proband matched)
 Not segregated
 
 
 sanders_11_ASD_discovery_cases-11063.p1
 
 
 Maternal
 Simplex (quad-proband matched)
 Not segregated
 
 
 sanders_11_ASD_discovery_cases-11080.p1
 
 
 Maternal
 Simplex (trio)
 NA
 GSTA1,GSTA2,GSTA12P,GSTA6P
 
 sanders_11_ASD_discovery_cases-11085.p1
 
 
 Maternal
 Simplex (quad-proband matched)
 Not segregated
 
 
 sanders_11_ASD_discovery_cases-11115.p1
 
 
 Maternal
 Simplex (quad-proband matched)
 Not segregated
 
 
 sanders_11_ASD_discovery_cases-11265.p1
 
 
 Maternal
 Simplex (quad-proband matched)
 Not segregated
 
 
 sanders_11_ASD_discovery_cases-11291.p1
 
 
 Maternal
 Simplex (quad-proband matched)
 Not segregated
 
 
 sanders_11_ASD_discovery_cases-11300.p1
 
 
 Maternal
 Simplex (quad-proband matched)
 Not segregated
 
 
 sanders_11_ASD_discovery_cases-11323.p1
 
 
 Paternal
 Simplex (quad-proband matched)
 Not segregated
 
 
 sanders_11_ASD_discovery_cases-11336.p1
 
 
 Maternal
 Simplex (quad-proband matched)
 Not segregated
 
 
 sanders_11_ASD_discovery_cases-11356.p1
 
 
 Maternal
 Simplex (quad-proband matched)
 Not segregated
 GSTA1,GSTA2,GSTA12P,GSTA6P
 
 sanders_11_ASD_discovery_cases-11367.p1
 
 
 Paternal
 Simplex (quad-proband matched)
 Not segregated
 
 
 sanders_11_ASD_discovery_cases-11368.p1
 
 
 Maternal
 Simplex (quad-proband matched)
 Not segregated
 
 
 sanders_11_ASD_discovery_cases-11425.p1
 
 
 Paternal
 Simplex (quad-proband matched)
 Segregated
 KIAA1586,ZNF451
 
 sanders_11_ASD_discovery_cases-11437.p1
 
 
 Paternal
 Simplex (quad-proband matched)
 Not segregated
 GSTA1,GSTA2,GSTA12P,GSTA6P
 
 sanders_11_ASD_discovery_cases-11463.p1
 
 
 Maternal
 Simplex (quad-proband matched)
 Not segregated
 
 
 sanders_11_ASD_discovery_cases-11468.p1
 
 
 Paternal
 Simplex (trio)
 NA
 KIAA1586,ZNF451
 
 sanders_11_ASD_discovery_cases-11488.p1
 
 
 Paternal
 Simplex (quad-proband matched)
 Not segregated
 
 
 sanders_11_ASD_discovery_cases-11522.p1
 
 
 Maternal
 Simplex (quad-proband matched)
 Not segregated
 
 
 sanders_11_ASD_discovery_cases-11597.p1
 
 
 Paternal
 Simplex (quad-proband matched)
 Not segregated
 GSTA1,GSTA2,GSTA12P
 
 sanders_11_ASD_discovery_cases-11600.p1
 
 
 Maternal
 Simplex (quad-proband matched)
 Not segregated
 
 
 sanders_11_ASD_discovery_cases-11615.p1
 
 
 Paternal
 Simplex (quad-proband matched)
 Not segregated
 
 
 sanders_11_ASD_discovery_cases-11625.p1
 
 
 Paternal
 Simplex (quad-proband matched)
 Not segregated
 
 
 sanders_11_ASD_discovery_cases-11693.p1
 
 
 Maternal
 Simplex (trio)
 NA
 
 
 sanders_11_ASD_discovery_cases-11811.p1
 
 
 Paternal
 Simplex (trio)
 NA
 
 
 sanders_11_ASD_discovery_cases-11843.p1
 
 
 Maternal
 Simplex (quad-proband matched)
 Not segregated
 
 
 sanders_11_ASD_discovery_cases-11878.p1
 
 
 Paternal
 Simplex (trio)
 NA
 GSTA1,GSTA2,GSTA12P
 
 sanders_11_ASD_discovery_cases-12007.p1
 
 
 Maternal
 Simplex (quad-proband matched)
 Not segregated
 
 
 sanders_11_ASD_discovery_cases-12031.p1
 
 
 Paternal
 Simplex (trio)
 NA
 
 
 sanders_11_ASD_discovery_cases-12106.p1
 
 
 Paternal
 Simplex (quad-proband matched)
 Not segregated
 KIAA1586,ZNF451
 
 sanders_11_ASD_discovery_cases-12154.p1
 
 
 Maternal
 Simplex (quad-proband matched)
 Not segregated
 
 
 sanders_11_ASD_discovery_cases-12211.p1
 
 
 Maternal
 Simplex (quad-proband matched)
 Not segregated
 
 
 sanders_11_ASD_discovery_cases-12272.p1
 
 
 Maternal
 Simplex (quad-proband matched)
 Not segregated
 
 
 sanders_11_ASD_discovery_cases-12295.p1
 
 
 Maternal
 Simplex (quad-proband matched)
 Not segregated
 
 
 sanders_11_ASD_discovery_cases-12299.p1
 
 
 Maternal
 Simplex (quad-proband matched)
 Not segregated
 
 
 sanders_11_ASD_discovery_cases-12341.p1
 
 
 Maternal
 Simplex (quad-proband matched)
 Not segregated
 
 
 sanders_11_ASD_discovery_cases-12359.p1
 
 
 Maternal
 Simplex (quad-proband matched)
 Not segregated
 GFRAL
 
 sanders_11_ASD_discovery_cases-12360.p1
 
 
 Maternal
 Simplex (quad-proband matched)
 Not segregated
 
 
 sanders_11_ASD_discovery_cases-12383.p1
 
 
 Paternal
 Simplex (quad-proband matched)
 Not segregated
 
 
 sanders_11_ASD_discovery_cases-12494.p1
 
 
 Paternal
 Simplex (quad-proband matched)
 Not segregated
 
 
 sanders_11_ASD_discovery_cases-12536.p1
 
 
 Maternal
 Simplex (quad-proband matched)
 Not segregated
 
 
 sanders_11_ASD_discovery_cases-12596.p1
 
 
 Paternal
 Simplex (quad-proband matched)
 Not segregated
 CLNS1AP1,TINAG
 
 sanders_11_ASD_discovery_cases-12761.p1
 
 
 Paternal
 Simplex (trio)
 NA
 
 
 sanders_11_ASD_discovery_cases-12924.p1
 
 
 Paternal
 Simplex (quad-proband matched)
 Not segregated
 
 
 sanders_11_ASD_discovery_cases-12937.p1
 
 
 Maternal
 Simplex (quad-proband matched)
 Not segregated
 
 
 sanders_11_ASD_discovery_cases-12948.p1
 
 
 Maternal
 Simplex (trio)
 NA
 
 
 sanders_11_ASD_discovery_cases-12962.p1
 
 
 Maternal
 Simplex (quad-proband matched)
 Not segregated
 MLIP,MLIP-AS1,MLIP-IT1
 
 sanders_11_ASD_discovery_cases-13016.p1
 
 
 Maternal
 Simplex (quad-proband matched)
 Not segregated
 
 
 sanders_11_ASD_discovery_cases-13120.p1
 
 
 Paternal
 Simplex (quad-proband matched)
 Not segregated
 
 
 sanders_11_ASD_discovery_cases-13171.p1
 
 
 Maternal
 Simplex (quad-proband matched)
 Not segregated
 
 
 sanders_11_ASD_discovery_cases-13244.p1
 
 
 Maternal
 Simplex (trio)
 NA
 
 
 sanders_11_ASD_discovery_cases-13322.p1
 
 
 Maternal
 Simplex (quad-proband matched)
 Not segregated
 GSTA1,GSTA2,GSTA12P
 
 vaags_11_ASD_discovery_cases-probandF2-003
 
 
 Unknown
 Multiplex
 Unknown
 
 

Controls

Patient ID
Validation Description
Primary Disorder Inheritence
Inheritence
Family Profile
Disease Segregation
Gene Content
Altered Gene Expression
bacchelli_20_ASD_discovery_controls-control10011
 
 
  Unknown
 
 
  KIAA1586
 
bacchelli_20_ASD_discovery_controls-control20039
 
 
  Unknown
 
 
  KIAA1586
 
engchuan_15_ASD_discovery_controls-control110036004877_
 
 
  Unknown
 
 
 
 
engchuan_15_ASD_discovery_controls-control110036021087_
 
 
  Unknown
 
 
  KIAA1586,ZNF451
 
engchuan_15_ASD_discovery_controls-control110036021954_
 
 
  Unknown
 
 
 
 
engchuan_15_ASD_discovery_controls-controlB100331_1007873991
 
 
  Unknown
 
 
  KIAA1586,ZNF451
 
engchuan_15_ASD_discovery_controls-controlB107311_1007871675
 
 
  Unknown
 
 
  BMP5
 
engchuan_15_ASD_discovery_controls-controlB257988_1007841389
 
 
  Unknown
 
 
 
 
engchuan_15_ASD_discovery_controls-controlB266791_1007871681
 
 
  Unknown
 
 
 
 
engchuan_15_ASD_discovery_controls-controlB404952_1007854757
 
 
  Unknown
 
 
  GSTA1,GSTA2,GSTA12P,GSTA6P
 
engchuan_15_ASD_discovery_controls-controlB431062_1007840503
 
 
  Unknown
 
 
 
 
engchuan_15_ASD_discovery_controls-controlB431282_1007873513
 
 
  Unknown
 
 
 
 
engchuan_15_ASD_discovery_controls-controlB487470_1007873444
 
 
  Unknown
 
 
 
 
engchuan_15_ASD_discovery_controls-controlB532470_1007875811
 
 
  Unknown
 
 
 
 
engchuan_15_ASD_discovery_controls-controlB549487_1007840956
 
 
  Unknown
 
 
 
 
engchuan_15_ASD_discovery_controls-controlB585576_1007875272
 
 
  Unknown
 
 
 
 
engchuan_15_ASD_discovery_controls-controlB647746_1007873514
 
 
  Unknown
 
 
  KIAA1586,ZNF451
 
engchuan_15_ASD_discovery_controls-controlB666611_1007875265
 
 
  Unknown
 
 
 
 
engchuan_15_ASD_discovery_controls-controlB697807_1007852545
 
 
  Unknown
 
 
 
 
engchuan_15_ASD_discovery_controls-controlB759914_1007846064
 
 
  Unknown
 
 
 
 
engchuan_15_ASD_discovery_controls-controlB764705_1007853643
 
 
  Unknown
 
 
  KIAA1586,ZNF451
 
engchuan_15_ASD_discovery_controls-controlB771183_1007874859
 
 
  Unknown
 
 
  KIAA1586,ZNF451
 
engchuan_15_ASD_discovery_controls-controlB791991_1007852595
 
 
  Unknown
 
 
 
 
engchuan_15_ASD_discovery_controls-controlB826617_0067942631
 
 
  Unknown
 
 
 
 
engchuan_15_ASD_discovery_controls-controlB830766_1007854715
 
 
  Unknown
 
 
 
 
engchuan_15_ASD_discovery_controls-controlB841482_1007854027
 
 
  Unknown
 
 
 
 
engchuan_15_ASD_discovery_controls-controlB855640_1007853300
 
 
  Unknown
 
 
 
 
engchuan_15_ASD_discovery_controls-controlB911786_1007854079
 
 
  Unknown
 
 
 
 
engchuan_15_ASD_discovery_controls-controlB916240_1007854325
 
 
  Unknown
 
 
 
 
engchuan_15_ASD_discovery_controls-controlB984152_1007842480
 
 
  Unknown
 
 
 
 
engchuan_15_ASD_discovery_controls-controlHABC_900067_900067
 
 
  Unknown
 
 
  GSTA1,GSTA2,GSTA12P,GSTA6P
 
engchuan_15_ASD_discovery_controls-controlHABC_900293_900293
 
 
  Unknown
 
 
  GSTA1,GSTA2,GSTA12P,GSTA6P
 
engchuan_15_ASD_discovery_controls-controlHABC_900599_900599
 
 
  Unknown
 
 
  KIAA1586,ZNF451
 
engchuan_15_ASD_discovery_controls-controlHABC_900773_900773
 
 
  Unknown
 
 
  KIAA1586,ZNF451
 
engchuan_15_ASD_discovery_controls-controlHABC_901195_901195
 
 
  Unknown
 
 
  COL21A1
 
engchuan_15_ASD_discovery_controls-controlHABC_902662_902662
 
 
  Unknown
 
 
  KIAA1586,ZNF451
 
girirajan_13a_ASD_discovery_controls1-control5
 
 
  Unknown
 
 
  KIAA1586,ZNF451
 
girirajan_13a_ASD_discovery_controls2-control31
 
 
  Unknown
 
 
  KIAA1586
 
krumm_13_ASD_discovery_controls-control12106.s1
  Solid phase hybridization (Illumina 1M) and aCGH (Agilent SurePrint G3 4x180K)
 
  Paternal
  Simplex
 
  KIAA1586
 
krumm_15_ASD_discovery_controls-control11933.s1
  Illumina 1MDuo
 
  Paternal
 
 
  KIAA1586,ZNF451
 
krumm_15_ASD_discovery_controls-control12786.s1
  Illumina 1MDuo
 
  Maternal
 
 
  TINAG,MLIP
 
krumm_15_ASD_discovery_controls-control13129.s1
  1M-Duov3
 
  Paternal
 
 
  KIAA1586,ZNF451
 
krumm_15_ASD_discovery_controls-control13968.s1
  Omni2.5-4v1
 
  Paternal
 
 
  GFRAL
 
sanders_11_ASD_discovery_controls-11057.s1
 
 
  Paternal
  Simplex (quad)
  NA
 
 
sanders_11_ASD_discovery_controls-11059.s1
 
 
  Paternal
  Simplex (quad)
  NA
 
 
sanders_11_ASD_discovery_controls-11063.s1
 
 
  Maternal
  Simplex (quad)
  NA
 
 
sanders_11_ASD_discovery_controls-11086.s1
 
 
  Maternal
  Simplex (quad)
  NA
 
 
sanders_11_ASD_discovery_controls-11115.s1
 
 
  Maternal
  Simplex (quad)
  NA
 
 
sanders_11_ASD_discovery_controls-11156.s1
 
 
  Maternal
  Simplex (quad)
  NA
  KIAA1586,ZNF451
 
sanders_11_ASD_discovery_controls-11229.s1
 
 
  Paternal
  Simplex (quad)
  NA
 
 
sanders_11_ASD_discovery_controls-11265.s1
 
 
  Maternal
  Simplex (quad)
  NA
 
 
sanders_11_ASD_discovery_controls-11300.s1
 
 
  Maternal
  Simplex (quad)
  NA
 
 
sanders_11_ASD_discovery_controls-11336.s1
 
 
  Maternal
  Simplex (quad)
  NA
 
 
sanders_11_ASD_discovery_controls-11368.s1
 
 
  Maternal
  Simplex (quad)
  NA
 
 
sanders_11_ASD_discovery_controls-11488.s1
 
 
  Paternal
  Simplex (quad)
  NA
 
 
sanders_11_ASD_discovery_controls-11511.s1
 
 
  Paternal
  Simplex (quad)
  NA
 
 
sanders_11_ASD_discovery_controls-11526.s1
 
 
  Paternal
  Simplex (quad)
  NA
  KIAA1586,ZNF451
 
sanders_11_ASD_discovery_controls-11597.s1
 
 
  Paternal
  Simplex (quad)
  NA
  GSTA1,GSTA2,GSTA12P
 
sanders_11_ASD_discovery_controls-11615.s1
 
 
  Paternal
  Simplex (quad)
  NA
 
 
sanders_11_ASD_discovery_controls-11625.s1
 
 
  Paternal
  Simplex (quad)
  NA
 
 
sanders_11_ASD_discovery_controls-11654.s1
 
 
  Paternal
  Simplex (quad)
  NA
  KIAA1586,ZNF451
 
sanders_11_ASD_discovery_controls-12007.s1
 
 
  Maternal
  Simplex (quad)
  NA
 
 
sanders_11_ASD_discovery_controls-12106.s1
 
 
  Paternal
  Simplex (quad)
  NA
  KIAA1586,ZNF451
 
sanders_11_ASD_discovery_controls-12197.s1
 
 
  Paternal
  Simplex (quad)
  NA
 
 
sanders_11_ASD_discovery_controls-12359.s1
 
 
  Maternal
  Simplex (quad)
  NA
  GFRAL
 
sanders_11_ASD_discovery_controls-12424.s1
 
 
  Maternal
  Simplex (quad)
  NA
 
 
sanders_11_ASD_discovery_controls-12494.s1
 
 
  Paternal
  Simplex (quad)
  NA
 
 
sanders_11_ASD_discovery_controls-12517.s1
 
 
  Maternal
  Simplex (quad)
  NA
 
 
sanders_11_ASD_discovery_controls-12536.s1
 
 
  Maternal
  Simplex (quad)
  NA
 
 
sanders_11_ASD_discovery_controls-12578.s1
 
 
  Paternal
  Simplex (quad)
  NA
 
 
sanders_11_ASD_discovery_controls-12596.s1
 
 
  Paternal
  Simplex (quad)
  NA
  CLNS1AP1,TINAG
 
sanders_11_ASD_discovery_controls-12602.s1
 
 
  Paternal
  Simplex (quad)
  NA
 
 
sanders_11_ASD_discovery_controls-12784.s1
 
 
  Paternal
  Simplex (quad)
  NA
 
 
sanders_11_ASD_discovery_controls-12786.s1
 
 
  Maternal
  Simplex (quad)
  NA
 
 
sanders_11_ASD_discovery_controls-12786.s1
 
 
  Maternal
  Simplex (quad)
  NA
  TINAG,MLIP,MLIP-AS1
 
sanders_11_ASD_discovery_controls-12962.s1
 
 
  Maternal
  Simplex (quad)
  NA
  MLIP,MLIP-AS1,MLIP-IT1
 
sanders_11_ASD_discovery_controls-13036.s1
 
 
  Maternal
  Simplex (quad)
  NA
  GSTA1,GSTA2,GSTA12P
 
sanders_11_ASD_discovery_controls-13120.s1
 
 
  Paternal
  Simplex (quad)
  NA
 
 
sanders_11_ASD_discovery_controls-13171.s1
 
 
  Maternal
  Simplex (quad)
  NA
 
 
sanders_11_ASD_discovery_controls-13196.s1
 
 
  Paternal
  Simplex (quad)
  NA
 
 
sanders_11_ASD_discovery_controls-13322.s1
 
 
  Maternal
  Simplex (quad)
  NA
  GSTA1,GSTA2,GSTA12P
 

No Animal Model Data Available
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