HELP     Sign In

2q14.3-q24.3CNV Type: Duplication


Largest CNV size: 47217000 bp

Statistics Box:
Number of Reports: 1



Summary Information

Duplication containing the MBD5 gene identified in a patient with developmental delay and ASD/autistic features

Additional Locus Information

Genome browsers

USCS Symbol             NCBI Symbol

Decipher

            Decipher Symbol

References

Major Reports

Title
Author, Year
Report Class
CNV Type

No Major Reports

Minor Reports

Title
Author, Year
Report Class
CNV Type
Reciprocal deletion and duplication at 2q23.1 indicates a role for MBD5 in autism spectrum disorder.
Duplication

Cases

Cohort ID
Author, Year
Descripton
Cohort Size
Diagnosis
Age
Gender
CNV Size
Deletion
Duplication
Total CNV's
 mullegama_13_ASD/DD/ID_discovery_cases
 Individuals with 2q23.1/MBD5 duplications; two cases previously reported in Chung et al. Eur J Hum Genet 2012 report. Only individuals with defined duplication start and end points (from Supplemental Table 1)were annotated.
 30
 Most prevalent phenotypic features: developmental delay (DD), motor delay, language impairment, behavioral problems, ASD/autistic features.
 N/A
 N/A
 47217000
 0
 1
 1

Controls

No Control Data Available

Cases

Cohort ID
Geographical Ancestry
Discovery Method
Platform
Algorithm
Software
Validation Method
 mullegama_13_ASD/DD/ID_discovery_cases
  N/A
 N/A
  N/A
 
 
 N/A

Controls

No Control Data Available

Cases

Patient ID
Author, Year
Age
Gender
Primary Diagnosis
Clinical Profile
Cognitive Profile
CNV Start
CNV End
CNV Size
Genome Build
Type Method
Validation
  mullegama_13_ASD/DD/ID_discovery_cases-caseDECIPHER_254507
 N/A
 N/A
 DD and ASD/autistic features
 N/A
 N/A
 125486467
 172604532
  47118066
 GRCh38
 Duplication
 No

Controls

No Control Data Available

Cases

Patient ID
Validation Description
Primary Disorder Inheritence
Inheritence
Family Profile
Disease Segregation
Gene Content
Altered Gene Expression
 mullegama_13_ASD/DD/ID_discovery_cases-caseDECIPHER_254507
 
 
 Unknown
 Unknown
 Unknown
 LINC01941,YWHAZP2,RNU6-675P,TEX51,RNU7-182P,NIFKP9,RNU6-1147P,PROC,MIR4783,RNU4-48P,SFT2D3,RNY4P7,RNU6-395P,DYNLT3P2,RNA5SP103,ISCA1P6,PPIAP65,RPL22P7,RAB6C,KLF2P1,CYP4F27P,RNU6-1049P,CCDC74B,TUBA3E,RHOQP3,NOC2LP1,MED15P5,MTND1P29,MTND2P22,MTCO1P7,MTCO2P7,MTATP6P7,MTCO3P7,MTND4P27,MTND5P29,MTND6P8,MTCYBP8,CCDC115,IMP4,FAR2P2,KLF2P2,RNU6-473P,CFC1B,RNU6-848P,CYP4F30P,KLF2P3,GPR148,CYCSP8,NEK2P4,NF1P8,MED15P8,RNU6-127P,KLF2P4,ARHGAP42P1,RAB6D,MTCYBP10,MTND6P10,MTND5P23,MTND4P21,MTND3P18,MTCO3P18,MTATP6P4,MTCO2P18,MTND2P18,MTND1P26,MED15P3,LINC01120,GNAQP1,NOC2LP2,RHOQP2,MIR4784,MED15P4,RNU6-617P,GRAMD4P8,C2orf27B,RNU6-1132P,RNA5-8SP5,MIR663B,CDC27P1,FAM201B,RNU6-175P,YBX1P7,RN7SKP103,RNU6-579P,RN7SKP154,NCKAP5-IT1,RN7SKP93,MIR3679,RNA5SP104,EDDM3CP,VDAC2P4,MIR5590,SNORA40B,RNU6-512P,MIR128-1,CXCR4,UBBP1,RN7SKP141,SMC4P1,RNA5SP105,LINC01832,YWHAEP5,RN7SKP286,YY1P2,AHCYP4,MRPS18BP2,RN7SL283P,MTCO1P44,MTND2P19,MTND1P27,MIR7157,RNU6-904P,UBE2V1P14,MTCYBP11,MTND6P11,MTND5P24,MTND4LP12,MTND3P9,MTCO3P5,MTCO2P5,ZEB2-AS1,LINC01966,RPL6P5,RNU7-2P,RNU6-692P,RNU6-715P,RNA5SP106,RNU6-1275P,RPS29P8,RNU2-9P,UBBP3,TXNP5,FAM8A3P,RNU6-601P,FABP5P10,MIR4773-2,MIR4773-1,RN7SL124P,RPL30P2,UBQLN4P2,ATP5PBP4,RPRM,DNAJA1P2,PHBP4,RNA5SP107,CBX3P6,RNU6-1001P,MTCO1P45,MTND2P20,ATP5F1AP2,MTND4P28,MTND5P30,MTND6P9,MTCYBP9,RNU6-546P,RPLP0P7,CDK7P1,RN7SKP281,FAM133DP,RNU6-436P,RNU6-932P,PTP4A1P1,UPP2-IT1,HNRNPDLP2,RN7SL393P,OR7E89P,OR7E28P,RNU2-21P,BTF3L4P2,RNU6-580P,GSTM3P2,MIR6888,MIR4785,RN7SL423P,LINC01806,RNA5SP108,TBR1,AHCTF1P1,KRT18P46,RPEP5,TIMM8AP1,EIF3EP2,GCG,RNA5SP109,RPL7P61,RNU6-627P,PRPS1P1,CYP2C56P,SNORA70F,RNA5SP110,RNA5SP111,MAPRE1P3,RN7SKP152,RNU7-148P,CTAGE14P,RN7SL813P,MIR4774,RNU6-766P,CERS6-AS1,PHOSPHO2,PTCHD3P2,RNU6-1006P,HMGB1P4,LINC01124,SP5,EIF2S2P4,DAP3P2,RPL21P38,RNU6-182P,DLX1,DLX2,DLX2-DT,ITGA6-AS1,LINC01889,GYPC,BIN1,CYP27C1,MAP3K2,IWS1,MYO7B,GPR17,POLR2D,AMMECR1L,SAP130,HS6ST1,LINC01854,LINC02572,PLAC9P1,LINC01856,RAB6C-AS1,ARHGAP42P2,POTEF,MED15P9,MZT2B,PTPN18,CYP4F62P,POTEI,PRSS40A,CFC1,POTEJ,FAR2P3,AMER3,POTEE,FAR2P4,MTCO1P18,TUBA3D,CCDC74A,LINC01087,ZNF806,CCNT2,UBXN4,MCM6,DARS-AS1,HNRNPKP2,HNMT,MTND4P22,RPL17P12,PABPC1P2,LINC01911,MMADHC,LINC01817,LINC01920,NMI,TNFAIP6,RIF1,ARL5A,ARL6IP6,RPL23AP29,NR4A2,LINC01958,ERMN,OR7E90P,MARCH7,LY75,LINC02478,FAP,GCA,SLC38A11,GALNT3,XIRP2-AS1,B3GALT1,SPC25,G6PC2,UBE2V1P6,BBS5,KLHL41,FASTKD1,CCDC173,SSB,METTL5,GAD1,GORASP2,METTL8,CYBRD1,METAP1D,PDK1,ERCC3,LIMS2,WDR33,UGGT1,SMPD4,PRSS40B,ARHGEF4,PLEKHB2,MZT2A,POTEKP,C2orf27A,LINC01945,ANKRD30BL,GPR39,LYPD1,TMEM163,CCNT2-AS1,ACMSD,MAP3K19,RAB3GAP1,R3HDM1,LCT,DARS,SPOPL,NXPH2,LINC01853,KYNU,GTDC1,ZEB2,LINC01412,ORC4,MBD5,EPC2,LYPD6B,LYPD6,LINC01931,LINC01818,RND3,RBM43,NEB,STAM2,FMNL2,PRPF40A,LINC01850,KCNJ3,GPD2,CYTIP,ACVR1C,ACVR1,UPP2,CCDC148-AS1,PKP4,PKP4-AS1,DAPL1,TANC1,WDSUB1,CD302,LY75-CD302,PLA2R1,ITGB6,TANK,PSMD14,DPP4,IFIH1,FIGN,GRB14,COBLL1,SCN3A,SCN2A,TTC21B,TTC21B-AS1,SCN1A,SCN9A,SCN7A,XIRP2,STK39,CERS6,ABCB11,DHRS9,LRP2,PPIG,KLHL23,MYO3B,ERICH2,TLK1,DCAF17,DYNC1I2,ITGA6,FAR2P1,FAM168B,NCKAP5,ZRANB3,THSD7B,LRP1B,ARHGAP15,TEX41,ACVR2A,KIF5C,CACNB4,GALNT13,LINC01876,GALNT5,CCDC148,RBMS1,SLC4A10,KCNH7,CSRNP3,NOSTRIN,UBR3,SLC25A12,HAT1,BAZ2B,MGAT5
 

Controls

No Control Data Available
No Animal Model Data Available
HELP
Copyright © 2017 MindSpec, Inc.