12p13.33-p13.32CNV Type: Deletion
Largest CNV size: 4790000 bp
Statistics Box:
Number of Reports: 9
Number of Reports: 9
Summary Information
Deletions involving this region were identified in three patients with childhood apraxia of speech/developmental verbal dyspraxia.
Additional Locus Information
References
Major Reports
Title
Author, Year
Report Class
CNV Type
An evidence-based approach to establish the functional and clinical significance of copy number variants in intellectual and developmental disabili...
Deletion-Duplication
12p13.33 microdeletion including ELKS/ERC1, a new locus associated with childhood apraxia of speech.
Deletion
Confirmation of chromosomal microarray as a first-tier clinical diagnostic test for individuals with developmental delay, intellectual disability, ...
Deletion
Genetic and phenotypic analysis of 101 patients with developmental delay or intellectual disability using whole-exome sequencing
Deletion
Minor Reports
Title
Author, Year
Report Class
CNV Type
Identification of small exonic CNV from whole-exome sequence data and application to autism spectrum disorder.
Duplication
Chromosomal microarray in clinical diagnosis: a study of 337 patients with congenital anomalies and developmental delays or intellectual disability.
Deletion
Cases
Cohort ID
Author, Year
Descripton
Cohort Size
Diagnosis
Age
Gender
CNV Size
Deletion
Duplication
Total CNV's
battaglia_13_DD/ID/ASD_discovery_cases
Patients affected by DD/ID/ASD/dysmorphic features of unknown origin observed at the Stella Maris Institute (Pisa, Italy) between May 2004 & December 2011
349
34 cases with borderline intellectual disability, 237 cases with mixed intellectual disability, 78 cases with intellectual disability and ASD (cases referred with a provisional diagnosis of ASD evaluated with ADI-R and ADOS-G)
Range, 5 mos.-19 yrs.
63.9% Male
1200000
1
0
1
hiraide_21_ASD/DD/ID_discovery_cases
Unexplained Japanese DD/ID patients that underwent whole exome sequencing at the Hamamatsu University School of Medicine between June 2016 and April 2020
101
All patients presented with developmental delay/intellectual disability (DD/ID); autism spectrum disorder was observed in 20 of 78 assessed patients (25.6%).
Median age at time of examination, 4.0 yrs. (range, 0-42 yrs)
62.38% Male
4437032
1
0
1
kaminsky_11_DD/ID/ASD_discovery_cases
Cases from the International Standards for Cytogenomic Arrays (ISCA) consortium
15749
Unexplained developmental delay, intellectual disability, dysmorphic features, multiple congenital anomalies, autism spectrum disorders, or clinical features suggestive of a chromosomal syndrome
NA
NA
3847192
2
2
4
martucci_23_ASD_discovery_cases
Children with ASD recruited between February 2016 and August 2021 at the Child Neuropsychiatry Unit of Umberto I Hospital, Sapienza University
130
Cases clinically diagnosed with ASD according to DSM-5 criteria and supported by ADI and ADOS
Mean age, 3.4 yrs. (range, 2-6 yrs)
83.85% Male
1460186
1
0
1
massier_24_ASD/ADHD/DD/ID_discovery_cases
Individuals from a French cohort of 27 families with a 3q29 duplication identified by CMA recruited from 14 French genetic centers from December 2018 to October 2022.
39
The most frequently observed neurodevelopmental phentoypes in this cohort were developmental delay, learning disability, intellectual disability, and behavioral disorders, including autism spectrum disorder and ADHD.
Range, fetus-adulthood
43.59% Male
3412922
1
0
1
miyake_23_ASD_discovery_cases
Cohort of ASD probands consisting of 351 trios, 24 quads, and two quintets included in a multi-center cohort.
405
Cases were clinically diagnosed with ASD based on DSM-V.
NA
69.88% Male
932602
0
1
1
poultney_13_ASD_discovery_cases
ASD cases of European ancestry from AGRE retained after filtering (original cohort size of 432 cases)
299
Cases diagnosed with ASD
N/A
79.86% Male (before filtering)
457694
0
1
1
sansovic_17_DD/ID/ASD_discovery_cases
Unrelated patients from Croatia referred to the Department of Medical Genetics and Reproductive Health, Children's Hospital Zagreb, University of Zagreb School of Medicine
337
Cases diagnosed by clinical geneticists or pediatricians to have developmental delay/intellectual disability (DD/ID), ASD, congenital anomalies, or a combination of those features
Mean, 7 years (range, 1 month-25 years)
N/A
4709000
1
0
1
thevenon_12_CAS/DVD_discovery_cases
Nine patients with a 12p13.33 subtelomeric or interstitial rearrangement from a French collaboration (n=7) together with a search in the DECIPHER database (n=2).
9
Patients evaluated by speech therapists for speech disorders. Diagnosis of childhood apraxia of speech/developmental verbal dyspraxia (CAS/DVD) made when a patient met the following criteria: (1) presence of significantly abnormal oro-facial praxis (assessed by Henin-Dulac scale) and (2) presence of five or more key features of CAS.
Range, 3-67 yrs.
88.9% Male
4790000
3
0
3
Controls
Cohort ID
Author, Year
Descripton
Cohort Size
Diagnosis
Age
Gender
CNV Size
Deletion
Duplication
Total CNV's
kaminsky_11_DD/ID/ASD_discovery_controls
Controls from the International Standards for Cytogenomic Arrays (ISCA) consortium
10118
Controls
NA
NA
NA
NA
NA
NA
poultney_13_ASD_discovery_controls
Controls matched for European ancestry from NIMH and CEPH retained after filtering (original cohort size of 379 controls)
260
Control
N/A
47.49% Male (before filtering)
0
0
0
0
Cases
Cohort ID
Geographical Ancestry
Discovery Method
Platform
Algorithm
Software
Validation Method
battaglia_13_DD/ID/ASD_discovery_cases
Italy
aCGH, array SNP
BACs aCGH, Agilent 44K, Agilent 180K, Affymetrix 6.0
FISH, qPCR
hiraide_21_ASD/DD/ID_discovery_cases
Japan
WES
Illumina HiSeq2500, Illumina NextSeq500
XHMM
aCGH, RT-qPCR
kaminsky_11_DD/ID/ASD_discovery_cases
NA
aCGH
Agilent 44K, Agilent 105K
Feature Extraction, DNA Analytics
FISH, qPCR, MLPA, aCGH, standard G-banded chromosome analysis
martucci_23_ASD_discovery_cases
Italy
Array SNP
Affymetrix Genome-Wide Human 6.0
Affymetrix ChAS v.4.0
RT-PCR
massier_24_ASD/ADHD/DD/ID_discovery_cases
France
CMA
miyake_23_ASD_discovery_cases
Japan
Exome sequencing
Illumina HiSeq 2000/2500
NA
XHMM
qPCR
poultney_13_ASD_discovery_cases
European
WES
Agilent SureSelect Human All Exon v.2
XHMM
None
sansovic_17_DD/ID/ASD_discovery_cases
Croatia
aCGH
Agilent SurePrint G3 Unrestricted CGH ISCA v2
Agilent Feature Extraction (v12.0), Agilent CytoGenomics (v3.0 and v4.0)
None
thevenon_12_CAS/DVD_discovery_cases
France (n=7), England (n=1), Canada (n=1)
aCGH, array SNP
Agilent 44K, Agilent 105K, Agilent 180K, Agilent 244K, Affymetrix 6.1
Agilent Feature Extraction V9.1, Agilent CGH Analytics V4.0, Illumina GenomeStudio V2011.1
qPCR, FISH
Controls
Cohort ID
Geographical Ancestry
Discovery Method
Platform
Algorithm
Software
Validation Method
kaminsky_11_DD/ID/ASD_discovery_controls
NA
aCGH
Agilent 44K, Agilent 105K
Feature Extraction, DNA Analytics
poultney_13_ASD_discovery_controls
European
WES
Agilent SureSelect Human All Exon v.2
XHMM
Cases
Patient ID
Author, Year
Age
Gender
Primary Diagnosis
Clinical Profile
Cognitive Profile
CNV Start
CNV End
CNV Size
Genome Build
Type Method
Validation
battaglia_13_DD/ID/ASD_discovery_cases-case50
4 yrs. 6 mos.
M
Developmental delay/intellectual disability
Autism: no. Epilepsy: no. Dysmorphic features: yes.
Mild-moderate DD/ID
2692847
3872533
1179687
GRCh38
Deletion
Yes
hiraide_21_ASD/DD/ID_discovery_cases-case2117
4 yrs.
M
ASD and developmental delay/intellectual disability
Birth/neonatal history: born at term; small for gestational age. Developmental milestones: first words at 22 months, walking independently at 14 months, sat independently at 8 months; speech delay, motor delay; developmental regression. Motor and musculoskeletal evaluation: hypotonia. Behavioral/psychiatric evaluation: autism spectrum disorder, stereotypies, sleep disorders. Growth parameters: short stature, microcephaly.
Moderate developmental delay/intellectual disability (DQ/IQ NA)
99116
4536147
4437032
GRCh38
Deletion
Yes
kaminsky_11_DD/ID/ASD_discovery_cases-ISCA00000257
NA
NA
Developmental delay/intellectual disability/ASD
Clinical profile NA
Cognitive profile NA
121255
3968447
3847193
GRCh38
Deletion
Yes
kaminsky_11_DD/ID/ASD_discovery_cases-ISCA00001171
NA
NA
Developmental delay/intellectual disability/ASD
Clinical profile NA
Cognitive profile NA
2492728
4829842
2337115
GRCh38
Deletion
Yes
kaminsky_11_DD/ID/ASD_discovery_cases-ISCA00003895
NA
NA
Developmental delay/intellectual disability/ASD
Clinical profile NA
Cognitive profile NA
1764264
4231744
2467481
GRCh38
Duplication
Yes
kaminsky_11_DD/ID/ASD_discovery_cases-ISCA00003992
NA
NA
Developmental delay/intellectual disability/ASD
Clinical profile NA
Cognitive profile NA
199896
3284963
3085068
GRCh38
Duplication
Yes
martucci_23_ASD_discovery_cases-case17
M
ASD
Case clinically diagnosed with ASD according to DSM-5 criteria and supported by ADI and ADOS. ADOS score: severe. Language and communication evaluation: verbal. EEG: negative. Family history: negative.
DQ/IQ score <50.
2166496
3626681
1460186
GRCh38
Deletion
Yes
massier_24_ASD/ADHD/DD/ID_discovery_cases-caseFam15_P24
8 yrs.
M
Developmental delay and intellectual disability
Developmental delay, low frustration tolerance
Severe intellectual disability
85083
3498004
3412922
GRCh38
Deletion
No
miyake_23_ASD_discovery_cases-case11954
NA
M
ASD
Case clinically diagnosed with ASD based on DSM-V criteria.
2448961
3381562
932602
GRCh38
Duplication
Yes
poultney_13_ASD_discovery_cases-case99HI0694B
N/A
F
ASD
ASD case from AGRE (AGRE ID AU038203; NDAR ID NDAR_INVXX733FLA)
2822792
3280485
457694
GRCh38
Duplication
No
sansovic_17_DD/ID/ASD_discovery_cases-case6
15 yrs.
F
Developmental delay/intellectual disability
Developmental delay/intellectual disability, Congenital anomalies, Dysmorphism
121255
4829842
4708588
GRCh38
Deletion
No
thevenon_12_CAS/DVD_discovery_cases-patient1
3 yrs.
M
CAS/DVD and ADHD features
Birth/neonatal history: asymmetrical cerebral ventricular dilation noticed during 3rd trimester of pregnancy; no additional abnormalities noted; birth at 39 weeks of gestation (weight 3270 g, length 51 cm, OFC 35 cm); described as clam baby with no interest in toys. Developmental milestones: walking acquired at 21 months; speech delayed until ~3 years. Neuropsychological evaluation identified dysharmonic neuropsychological profile (WPPSI-III, comprehension SN 4/19, reading ability SN 8/19, cubes SN 1/19, object assembly and block design SN 11/19). Langauge and communication evaluation (orthophonic findings): CAS/DVD (childhood apraxia of speech/developmental verbal dyspraxia), communicated mostly by shouting; reading abilities different from word comprehension (which was very low) and aggravated by visual perception deficiency evidenced by difficulties in picture naming; performances comparable to those of children his age; speech evaluation at 46 months diagnosed speech impairment with no communication toubrles (low comprehension skills, spontaneous speech associated with unarticulated words were understood & translated by family). Behavioral/psychiatric evaluation: solitariness and low social interactions; attention deficit noticed (patient too young to confirm diagnosis of ADHD). Schooling: normal with personal assistance. Sleep disturbances: yes. Brain imaging: normal brain MRI. Auditory evaluation: normal. Dysmorphic features: square coarse face, mild frontal bossing, enophtalmia, low-set ears, anteverted and thick ear lobes, marked philtrum, large nares, thin upper lip, irregular and narrowly-spaced teeth, hypertrichosis on lower region of back. Growth parameters: height and weight on mean curve; macrocephaly (+ 2.5 SD). Family history: second child born to healthy parents; old brother with normal development and schooling; mother with CAS/DVD (patient 2 in this report).
No intellectual disability; IQ could not be calculated due to disassociation between performances and verbal abilities.
199696
3285115
3085420
GRCh38
Deletion
Yes
thevenon_12_CAS/DVD_discovery_cases-patient2
35 yrs.
F
CAS/DVD
Developmental milestones: past history of severe speech delay with speech production troubles; first words at 4 years; intensive speech therapy. Langauge and communication evaluation (orthophonic findings): CAS/DVD (childhood apraxia of speech/); specialized speech evaluation revealed better receptive than expressive abilites, inconsistent errors on consonants and vowels in repeated production of syllables or words with an increase in errors with longer words, impaired ability to repeat nonsense words, and oral apraxia in fine coordinated movement sequence of the mouth, tongue, lips, and eyes. Behavioral/psychiatric evaluation: normal; good social integration. Schooling: difficulties with schooling, but did not attend a special needs school; no high school diploma, but followed vocational course. Family history: son with CAS/DVD (patient 1 in this report).
No intellectual disability. IQ of 89 (WAIS-III, IVQ of 86 with VCI 92, WMI of 94, IPQ of 96 with OPI of 95 and PSI of 102).
199696
3285115
3085420
GRCh38
Deletion
Yes
thevenon_12_CAS/DVD_discovery_cases-patient9
11 yrs.
M
CAS/DVD and intellectual disability
Birth/neonatal history: pregnancy marked by IUGR (intra-uterine growth retardation). Developmental milestones: initial presentation at 4 years with speech delay and normal motor skills; sitting acquired at 7 months, walking at 16 months; first words between 36-40 months; first sentences at 8 years. Langauge and communication evaluation (orthophonic findings): CAS/DVD (childhood apraxia of speech/developmental verbal dyspraxia); speech production troubles contrasting with better lexical acquisition; oro-facial apraxia associated with poor intelligibility of speech; frequent sound omissions and vowel errors; speech only understood by parents. Motor and musculoskeletal evaluation: moderate joint laxity; poor fine motor skills. Behavioral/psychiatric evaluation: abnormal behavior. Schooling: special needs. Other medical concerns and comorbidities: chronic otitis diagnosed, grommets implanted. Dysmorphic features: hypotelorism, microcephaly with a prominent metopic suture, brittle first toe nails. Growth parameters: height and weight +1 SD, persistent microcephaly (OFC -2.2 SD). Family history: mother had personal history of speech delay with no consequences on education or professional career.
Intellectual disability
183966
4810852
4626887
GRCh38
Deletion
Yes
Controls
No Control Data Available
Cases
Patient ID
Validation Description
Primary Disorder Inheritence
Inheritence
Family Profile
Disease Segregation
Gene Content
Altered Gene Expression
battaglia_13_DD/ID/ASD_discovery_cases-case50
FISH or qPCR
De novo
Unknown
Unknown
LINC02371,IQSEC3P1,RPL23AP14,CBX3P4,RNU6-1315P,TSPAN9-IT1,LINC02417,RNU6-174P,OTUD4P1,ITFG2-AS1,FKBP4,ITFG2,NRIP2,TEX52,FOXM1,RHNO1,TULP3,TEAD4,PRMT8,CRACR2A,PARP11,CACNA1C,TSPAN9
hiraide_21_ASD/DD/ID_discovery_cases-case2117
aCGH, RT-qPCR
De novo
CACNA1C,CCND2,FKBP4,FOXM1,FGF6,PARP11,PRMT8,ITFG2,C12orf4,TIGAR,WNK1,ADIPOR2,CCDC77,WNT5B,RHNO1,NRIP2,CACNA2D4,CRACR2A,FBXL14,DCP1B,B4GALNT3,ITFG2-AS1,RPL23AP14,OTUD4P1,HSPA8P5,IQSEC3,LRTM2,RPS4XP14,NINJ2-AS1,NINJ2,IQSEC3P1,LINC00940,LINC00942,HTR1DP1,MIR3649,CACNA1C-AS1,CACNA1C-AS2,CBX3P4,CACNA1C-IT2,TSPAN9-IT1,CACNA1C-AS4,CACNA1C-IT3,KDM5A,RAD52,SLC6A12-AS1,TEX52,LINC02417,LINC02455,PARP11-AS1,CCND2-AS1,LINC02827,CACNA1C-AS3,TEAD4,SLC6A12,SLC6A13,TULP3,RNU6-174P,RNU4ATAC16P,RNU6-1315P,RNU7-103P,LINC02371,CACNA1C-IT1,FGF23,TSPAN9,ERC1
kaminsky_11_DD/ID/ASD_discovery_cases-ISCA00000257
FISH, qPCR, MLPA, aCGH, or standard G-banded chromosome analysis
De novo
Unknown
Unknown
RNU7-103P,LINC02455,RNU4ATAC16P,HTR1DP1,LINC00942,MIR3649,RPS4XP14,CACNA1C-IT1,CACNA1C-IT2,CACNA1C-AS4,LINC02371,IQSEC3P1,RPL23AP14,CBX3P4,RNU6-1315P,TSPAN9-IT1,LINC02417,RNU6-174P,OTUD4P1,SLC6A12,KDM5A,LINC00940,CACNA1C-IT3,CACNA1C-AS3,CACNA1C-AS2,CACNA1C-AS1,ITFG2-AS1,FKBP4,ITFG2,NRIP2,TEX52,FOXM1,IQSEC3,SLC6A13,CCDC77,B4GALNT3,NINJ2,WNK1,RAD52,WNT5B,FBXL14,ADIPOR2,CACNA2D4,LRTM2,DCP1B,RHNO1,TULP3,TEAD4,PRMT8,CRACR2A,PARP11,ERC1,CACNA1C,TSPAN9
kaminsky_11_DD/ID/ASD_discovery_cases-ISCA00001171
FISH, qPCR, MLPA, aCGH, or standard G-banded chromosome analysis
Unknown
Unknown
Unknown
LINC02371,IQSEC3P1,RPL23AP14,CBX3P4,RNU6-1315P,TSPAN9-IT1,LINC02417,RNU6-174P,OTUD4P1,HSPA8P5,KCNA6,CACNA1C-AS3,CACNA1C-AS2,CACNA1C-AS1,ITFG2-AS1,FKBP4,ITFG2,NRIP2,TEX52,FOXM1,CCND2-AS1,CCND2,FGF23,FGF6,C12orf4,RAD51AP1,AKAP3,NDUFA9,RHNO1,TULP3,TEAD4,PRMT8,CRACR2A,PARP11,TIGAR,DYRK4,GAU1,GALNT8,CACNA1C,TSPAN9
kaminsky_11_DD/ID/ASD_discovery_cases-ISCA00003895
FISH, qPCR, MLPA, aCGH, or standard G-banded chromosome analysis
Unknown
Unknown
Unknown
CACNA1C-IT1,CACNA1C-IT2,CACNA1C-AS4,LINC02371,IQSEC3P1,RPL23AP14,CBX3P4,RNU6-1315P,TSPAN9-IT1,LINC02417,RNU6-174P,OTUD4P1,HSPA8P5,LINC00940,CACNA1C-IT3,CACNA1C-AS3,CACNA1C-AS2,CACNA1C-AS1,ITFG2-AS1,FKBP4,ITFG2,NRIP2,TEX52,FOXM1,ADIPOR2,CACNA2D4,LRTM2,DCP1B,RHNO1,TULP3,TEAD4,PRMT8,CRACR2A,PARP11,CACNA1C,TSPAN9
kaminsky_11_DD/ID/ASD_discovery_cases-ISCA00003992
FISH, qPCR, MLPA, aCGH, or standard G-banded chromosome analysis
Unknown
Unknown
Unknown
RNU7-103P,LINC02455,RNU4ATAC16P,HTR1DP1,LINC00942,MIR3649,RPS4XP14,CACNA1C-IT1,CACNA1C-IT2,CACNA1C-AS4,LINC02371,IQSEC3P1,RPL23AP14,CBX3P4,RNU6-1315P,TSPAN9-IT1,SLC6A12,KDM5A,LINC00940,CACNA1C-IT3,CACNA1C-AS3,CACNA1C-AS2,CACNA1C-AS1,ITFG2-AS1,FKBP4,ITFG2,NRIP2,TEX52,FOXM1,SLC6A13,CCDC77,B4GALNT3,NINJ2,WNK1,RAD52,WNT5B,FBXL14,ADIPOR2,CACNA2D4,LRTM2,DCP1B,RHNO1,TULP3,TEAD4,ERC1,CACNA1C,TSPAN9
martucci_23_ASD_discovery_cases-case17
RT-PCR
De novo
Simplex
Segregated
CACNA1C,FKBP4,FOXM1,ITFG2,PRMT8,NRIP2,RHNO1,CRACR2A,ITFG2-AS1,RPL23AP14,IQSEC3P1,CACNA1C-AS1,CACNA1C-AS4,CACNA1C-IT3,TSPAN9-IT1,CBX3P4,CACNA1C-AS2,TEX52,LINC02417,LINC02827,CACNA1C-AS3,TEAD4,TULP3,RNU6-1315P,LINC02371,TSPAN9
massier_24_ASD/ADHD/DD/ID_discovery_cases-caseFam15_P24
Unknown
CACNA1C,FKBP4,FOXM1,ITFG2,PRMT8,ADIPOR2,WNK1,NRIP2,WNT5B,RHNO1,CCDC77,CACNA2D4,FBXL14,DCP1B,ITFG2-AS1,B4GALNT3,RPL23AP14,IQSEC3,LRTM2,NINJ2-AS1,RPS4XP14,NINJ2,IQSEC3P1,LINC00940,LINC00942,HTR1DP1,MIR3649,CACNA1C-AS1,CACNA1C-AS4,CACNA1C-IT3,TSPAN9-IT1,CBX3P4,CACNA1C-AS2,KDM5A,RAD52,SLC6A12-AS1,TEX52,LINC02417,LINC02827,LINC02455,CACNA1C-AS3,TEAD4,SLC6A12,TULP3,SLC6A13,RNU4ATAC16P,RNU7-103P,RNU6-1315P,LINC02371,CACNA1C-IT1,TSPAN9,ERC1
miyake_23_ASD_discovery_cases-case11954
qPCR
Paternal
CACNA1C,FKBP4,FOXM1,ITFG2,PRMT8,NRIP2,RHNO1,ITFG2-AS1,RPL23AP14,IQSEC3P1,CACNA1C-AS1,TSPAN9-IT1,CBX3P4,CACNA1C-AS2,TEX52,LINC02417,LINC02827,CACNA1C-AS3,TEAD4,TULP3,RNU6-1315P,LINC02371,TSPAN9
poultney_13_ASD_discovery_cases-case99HI0694B
Unknown
Unknown (likely multiplex/AGRE)
Unknown
RNU6-1315P,TSPAN9-IT1,ITFG2,NRIP2,TEX52,FOXM1,RHNO1,TULP3,TEAD4,TSPAN9
sansovic_17_DD/ID/ASD_discovery_cases-case6
Paternal
RNU7-103P,LINC02455,RNU4ATAC16P,HTR1DP1,LINC00942,MIR3649,RPS4XP14,CACNA1C-IT1,CACNA1C-IT2,CACNA1C-AS4,LINC02371,IQSEC3P1,RPL23AP14,CBX3P4,RNU6-1315P,TSPAN9-IT1,LINC02417,RNU6-174P,OTUD4P1,HSPA8P5,KCNA6,SLC6A12,KDM5A,LINC00940,CACNA1C-IT3,CACNA1C-AS3,CACNA1C-AS2,CACNA1C-AS1,ITFG2-AS1,FKBP4,ITFG2,NRIP2,TEX52,FOXM1,CCND2-AS1,CCND2,FGF23,FGF6,C12orf4,RAD51AP1,AKAP3,NDUFA9,IQSEC3,SLC6A13,CCDC77,B4GALNT3,NINJ2,WNK1,RAD52,WNT5B,FBXL14,ADIPOR2,CACNA2D4,LRTM2,DCP1B,RHNO1,TULP3,TEAD4,PRMT8,CRACR2A,PARP11,TIGAR,DYRK4,GAU1,GALNT8,ERC1,CACNA1C,TSPAN9
thevenon_12_CAS/DVD_discovery_cases-patient1
qPCR
Maternal
Maternal
Simplex
Segregated
RNU7-103P,LINC02455,RNU4ATAC16P,HTR1DP1,LINC00942,MIR3649,RPS4XP14,CACNA1C-IT1,CACNA1C-IT2,CACNA1C-AS4,LINC02371,IQSEC3P1,RPL23AP14,CBX3P4,RNU6-1315P,TSPAN9-IT1,SLC6A12,KDM5A,LINC00940,CACNA1C-IT3,CACNA1C-AS3,CACNA1C-AS2,CACNA1C-AS1,ITFG2-AS1,FKBP4,ITFG2,NRIP2,TEX52,FOXM1,SLC6A13,CCDC77,B4GALNT3,NINJ2,WNK1,RAD52,WNT5B,FBXL14,ADIPOR2,CACNA2D4,LRTM2,DCP1B,RHNO1,TULP3,TEAD4,ERC1,CACNA1C,TSPAN9
thevenon_12_CAS/DVD_discovery_cases-patient2
qPCR or FISH
De novo
Unknown
Possibly segregated
RNU7-103P,LINC02455,RNU4ATAC16P,HTR1DP1,LINC00942,MIR3649,RPS4XP14,CACNA1C-IT1,CACNA1C-IT2,CACNA1C-AS4,LINC02371,IQSEC3P1,RPL23AP14,CBX3P4,RNU6-1315P,TSPAN9-IT1,SLC6A12,KDM5A,LINC00940,CACNA1C-IT3,CACNA1C-AS3,CACNA1C-AS2,CACNA1C-AS1,ITFG2-AS1,FKBP4,ITFG2,NRIP2,TEX52,FOXM1,SLC6A13,CCDC77,B4GALNT3,NINJ2,WNK1,RAD52,WNT5B,FBXL14,ADIPOR2,CACNA2D4,LRTM2,DCP1B,RHNO1,TULP3,TEAD4,ERC1,CACNA1C,TSPAN9
thevenon_12_CAS/DVD_discovery_cases-patient9
qPCR or FISH
De novo
Unknown
Possibly segregated
RNU7-103P,LINC02455,RNU4ATAC16P,HTR1DP1,LINC00942,MIR3649,RPS4XP14,CACNA1C-IT1,CACNA1C-IT2,CACNA1C-AS4,LINC02371,IQSEC3P1,RPL23AP14,CBX3P4,RNU6-1315P,TSPAN9-IT1,LINC02417,RNU6-174P,OTUD4P1,HSPA8P5,KCNA6,SLC6A12,KDM5A,LINC00940,CACNA1C-IT3,CACNA1C-AS3,CACNA1C-AS2,CACNA1C-AS1,ITFG2-AS1,FKBP4,ITFG2,NRIP2,TEX52,FOXM1,CCND2-AS1,CCND2,FGF23,FGF6,C12orf4,RAD51AP1,AKAP3,NDUFA9,SLC6A13,CCDC77,B4GALNT3,NINJ2,WNK1,RAD52,WNT5B,FBXL14,ADIPOR2,CACNA2D4,LRTM2,DCP1B,RHNO1,TULP3,TEAD4,PRMT8,CRACR2A,PARP11,TIGAR,DYRK4,GAU1,GALNT8,ERC1,CACNA1C,TSPAN9
Controls
No Control Data Available
No Animal Model Data Available