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12p13.33-p13.32CNV Type: Deletion


Largest CNV size: 4790000 bp

Statistics Box:
Number of Reports: 9



Summary Information

Deletions involving this region were identified in three patients with childhood apraxia of speech/developmental verbal dyspraxia.

Additional Locus Information

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USCS Symbol             NCBI Symbol

Decipher

            Decipher Symbol

References

Major Reports

Title
Author, Year
Report Class
CNV Type
An evidence-based approach to establish the functional and clinical significance of copy number variants in intellectual and developmental disabili...
Deletion-Duplication
12p13.33 microdeletion including ELKS/ERC1, a new locus associated with childhood apraxia of speech.
Deletion
Confirmation of chromosomal microarray as a first-tier clinical diagnostic test for individuals with developmental delay, intellectual disability, ...
Deletion
Genetic and phenotypic analysis of 101 patients with developmental delay or intellectual disability using whole-exome sequencing
Deletion
NA
Deletion

Minor Reports

Title
Author, Year
Report Class
CNV Type
Identification of small exonic CNV from whole-exome sequence data and application to autism spectrum disorder.
Duplication
Chromosomal microarray in clinical diagnosis: a study of 337 patients with congenital anomalies and developmental delays or intellectual disability.
Deletion
NA
Deletion

Cases

Cohort ID
Author, Year
Descripton
Cohort Size
Diagnosis
Age
Gender
CNV Size
Deletion
Duplication
Total CNV's
 battaglia_13_DD/ID/ASD_discovery_cases
 Patients affected by DD/ID/ASD/dysmorphic features of unknown origin observed at the Stella Maris Institute (Pisa, Italy) between May 2004 & December 2011
 349
 34 cases with borderline intellectual disability, 237 cases with mixed intellectual disability, 78 cases with intellectual disability and ASD (cases referred with a provisional diagnosis of ASD evaluated with ADI-R and ADOS-G)
 Range, 5 mos.-19 yrs.
 63.9% Male
 1200000
 1
 0
 1
 hiraide_21_ASD/DD/ID_discovery_cases
 Unexplained Japanese DD/ID patients that underwent whole exome sequencing at the Hamamatsu University School of Medicine between June 2016 and April 2020
 101
 All patients presented with developmental delay/intellectual disability (DD/ID); autism spectrum disorder was observed in 20 of 78 assessed patients (25.6%).
 Median age at time of examination, 4.0 yrs. (range, 0-42 yrs)
 62.38% Male
 4437032
 1
 0
 1
 kaminsky_11_DD/ID/ASD_discovery_cases
 Cases from the International Standards for Cytogenomic Arrays (ISCA) consortium
 15749
 Unexplained developmental delay, intellectual disability, dysmorphic features, multiple congenital anomalies, autism spectrum disorders, or clinical features suggestive of a chromosomal syndrome
 NA
 NA
 3847192
 2
 2
 4
 martucci_23_ASD_discovery_cases
  NA NA
 Children with ASD recruited between February 2016 and August 2021 at the Child Neuropsychiatry Unit of Umberto I Hospital, Sapienza University
 130
 Cases clinically diagnosed with ASD according to DSM-5 criteria and supported by ADI and ADOS
 Mean age, 3.4 yrs. (range, 2-6 yrs)
 83.85% Male
 1460186
 1
 0
 1
 massier_24_ASD/ADHD/DD/ID_discovery_cases
  NA NA
 Individuals from a French cohort of 27 families with a 3q29 duplication identified by CMA recruited from 14 French genetic centers from December 2018 to October 2022.
 39
 The most frequently observed neurodevelopmental phentoypes in this cohort were developmental delay, learning disability, intellectual disability, and behavioral disorders, including autism spectrum disorder and ADHD.
 Range, fetus-adulthood
 43.59% Male
 3412922
 1
 0
 1
 miyake_23_ASD_discovery_cases
 Cohort of ASD probands consisting of 351 trios, 24 quads, and two quintets included in a multi-center cohort.
 405
 Cases were clinically diagnosed with ASD based on DSM-V.
 NA
 69.88% Male
 932602
 0
 1
 1
 poultney_13_ASD_discovery_cases
 ASD cases of European ancestry from AGRE retained after filtering (original cohort size of 432 cases)
 299
 Cases diagnosed with ASD
 N/A
 79.86% Male (before filtering)
 457694
 0
 1
 1
 sansovic_17_DD/ID/ASD_discovery_cases
 Unrelated patients from Croatia referred to the Department of Medical Genetics and Reproductive Health, Children's Hospital Zagreb, University of Zagreb School of Medicine
 337
 Cases diagnosed by clinical geneticists or pediatricians to have developmental delay/intellectual disability (DD/ID), ASD, congenital anomalies, or a combination of those features
 Mean, 7 years (range, 1 month-25 years)
 N/A
 4709000
 1
 0
 1
 thevenon_12_CAS/DVD_discovery_cases
 Nine patients with a 12p13.33 subtelomeric or interstitial rearrangement from a French collaboration (n=7) together with a search in the DECIPHER database (n=2).
 9
 Patients evaluated by speech therapists for speech disorders. Diagnosis of childhood apraxia of speech/developmental verbal dyspraxia (CAS/DVD) made when a patient met the following criteria: (1) presence of significantly abnormal oro-facial praxis (assessed by Henin-Dulac scale) and (2) presence of five or more key features of CAS.
 Range, 3-67 yrs.
 88.9% Male
 4790000
 3
 0
 3

Controls

Cohort ID
Author, Year
Descripton
Cohort Size
Diagnosis
Age
Gender
CNV Size
Deletion
Duplication
Total CNV's
 kaminsky_11_DD/ID/ASD_discovery_controls
 Controls from the International Standards for Cytogenomic Arrays (ISCA) consortium
 10118
 Controls
 NA
 NA
 NA
 NA
 NA
 NA
 poultney_13_ASD_discovery_controls
 Controls matched for European ancestry from NIMH and CEPH retained after filtering (original cohort size of 379 controls)
 260
 Control
 N/A
 47.49% Male (before filtering)
 0
 0
 0
 0

Cases

Cohort ID
Geographical Ancestry
Discovery Method
Platform
Algorithm
Software
Validation Method
 battaglia_13_DD/ID/ASD_discovery_cases
  Italy
 aCGH, array SNP
  BACs aCGH, Agilent 44K, Agilent 180K, Affymetrix 6.0
 
 
 FISH, qPCR
 hiraide_21_ASD/DD/ID_discovery_cases
  Japan
 WES
  Illumina HiSeq2500, Illumina NextSeq500
 XHMM
 
 aCGH, RT-qPCR
 kaminsky_11_DD/ID/ASD_discovery_cases
  NA
 aCGH
  Agilent 44K, Agilent 105K
 
 Feature Extraction, DNA Analytics
 FISH, qPCR, MLPA, aCGH, standard G-banded chromosome analysis
 martucci_23_ASD_discovery_cases
  Italy
 Array SNP
  Affymetrix Genome-Wide Human 6.0
 
 Affymetrix ChAS v.4.0
 RT-PCR
 massier_24_ASD/ADHD/DD/ID_discovery_cases
  France
 CMA
 
 
 
 
 miyake_23_ASD_discovery_cases
  Japan
 Exome sequencing
  Illumina HiSeq 2000/2500
 NA
 XHMM
 qPCR
 poultney_13_ASD_discovery_cases
  European
 WES
  Agilent SureSelect Human All Exon v.2
 XHMM
 
 None
 sansovic_17_DD/ID/ASD_discovery_cases
  Croatia
 aCGH
  Agilent SurePrint G3 Unrestricted CGH ISCA v2
 
 Agilent Feature Extraction (v12.0), Agilent CytoGenomics (v3.0 and v4.0)
 None
 thevenon_12_CAS/DVD_discovery_cases
  France (n=7), England (n=1), Canada (n=1)
 aCGH, array SNP
  Agilent 44K, Agilent 105K, Agilent 180K, Agilent 244K, Affymetrix 6.1
 
 Agilent Feature Extraction V9.1, Agilent CGH Analytics V4.0, Illumina GenomeStudio V2011.1
 qPCR, FISH

Controls

Cohort ID
Geographical Ancestry
Discovery Method
Platform
Algorithm
Software
Validation Method
  kaminsky_11_DD/ID/ASD_discovery_controls
  NA
  aCGH
  Agilent 44K, Agilent 105K
 
  Feature Extraction, DNA Analytics
 
  poultney_13_ASD_discovery_controls
  European
  WES
  Agilent SureSelect Human All Exon v.2
  XHMM
 
 

Cases

Patient ID
Author, Year
Age
Gender
Primary Diagnosis
Clinical Profile
Cognitive Profile
CNV Start
CNV End
CNV Size
Genome Build
Type Method
Validation
  battaglia_13_DD/ID/ASD_discovery_cases-case50
 4 yrs. 6 mos.
 M
 Developmental delay/intellectual disability
 Autism: no. Epilepsy: no. Dysmorphic features: yes.
 Mild-moderate DD/ID
 2692847
 3872533
  1179687
 GRCh38
 Deletion
 Yes
  hiraide_21_ASD/DD/ID_discovery_cases-case2117
 4 yrs.
 M
 ASD and developmental delay/intellectual disability
 Birth/neonatal history: born at term; small for gestational age. Developmental milestones: first words at 22 months, walking independently at 14 months, sat independently at 8 months; speech delay, motor delay; developmental regression. Motor and musculoskeletal evaluation: hypotonia. Behavioral/psychiatric evaluation: autism spectrum disorder, stereotypies, sleep disorders. Growth parameters: short stature, microcephaly.
 Moderate developmental delay/intellectual disability (DQ/IQ NA)
 99116
 4536147
  4437032
 GRCh38
 Deletion
 Yes
  kaminsky_11_DD/ID/ASD_discovery_cases-ISCA00000257
 NA
 NA
 Developmental delay/intellectual disability/ASD
 Clinical profile NA
 Cognitive profile NA
 121255
 3968447
  3847193
 GRCh38
 Deletion
 Yes
  kaminsky_11_DD/ID/ASD_discovery_cases-ISCA00001171
 NA
 NA
 Developmental delay/intellectual disability/ASD
 Clinical profile NA
 Cognitive profile NA
 2492728
 4829842
  2337115
 GRCh38
 Deletion
 Yes
  kaminsky_11_DD/ID/ASD_discovery_cases-ISCA00003895
 NA
 NA
 Developmental delay/intellectual disability/ASD
 Clinical profile NA
 Cognitive profile NA
 1764264
 4231744
  2467481
 GRCh38
 Duplication
 Yes
  kaminsky_11_DD/ID/ASD_discovery_cases-ISCA00003992
 NA
 NA
 Developmental delay/intellectual disability/ASD
 Clinical profile NA
 Cognitive profile NA
 199896
 3284963
  3085068
 GRCh38
 Duplication
 Yes
  martucci_23_ASD_discovery_cases-case17
  NA NA
 
 M
 ASD
 Case clinically diagnosed with ASD according to DSM-5 criteria and supported by ADI and ADOS. ADOS score: severe. Language and communication evaluation: verbal. EEG: negative. Family history: negative.
 DQ/IQ score <50.
 2166496
 3626681
  1460186
 GRCh38
 Deletion
 Yes
  massier_24_ASD/ADHD/DD/ID_discovery_cases-caseFam15_P24
  NA NA
 8 yrs.
 M
 Developmental delay and intellectual disability
 Developmental delay, low frustration tolerance
 Severe intellectual disability
 85083
 3498004
  3412922
 GRCh38
 Deletion
 No
  miyake_23_ASD_discovery_cases-case11954
 NA
 M
 ASD
 Case clinically diagnosed with ASD based on DSM-V criteria.
 
 2448961
 3381562
  932602
 GRCh38
 Duplication
 Yes
  poultney_13_ASD_discovery_cases-case99HI0694B
 N/A
 F
 ASD
 ASD case from AGRE (AGRE ID AU038203; NDAR ID NDAR_INVXX733FLA)
 
 2822792
 3280485
  457694
 GRCh38
 Duplication
 No
  sansovic_17_DD/ID/ASD_discovery_cases-case6
 15 yrs.
 F
 Developmental delay/intellectual disability
 Developmental delay/intellectual disability, Congenital anomalies, Dysmorphism
 
 121255
 4829842
  4708588
 GRCh38
 Deletion
 No
  thevenon_12_CAS/DVD_discovery_cases-patient1
 3 yrs.
 M
 CAS/DVD and ADHD features
 Birth/neonatal history: asymmetrical cerebral ventricular dilation noticed during 3rd trimester of pregnancy; no additional abnormalities noted; birth at 39 weeks of gestation (weight 3270 g, length 51 cm, OFC 35 cm); described as clam baby with no interest in toys. Developmental milestones: walking acquired at 21 months; speech delayed until ~3 years. Neuropsychological evaluation identified dysharmonic neuropsychological profile (WPPSI-III, comprehension SN 4/19, reading ability SN 8/19, cubes SN 1/19, object assembly and block design SN 11/19). Langauge and communication evaluation (orthophonic findings): CAS/DVD (childhood apraxia of speech/developmental verbal dyspraxia), communicated mostly by shouting; reading abilities different from word comprehension (which was very low) and aggravated by visual perception deficiency evidenced by difficulties in picture naming; performances comparable to those of children his age; speech evaluation at 46 months diagnosed speech impairment with no communication toubrles (low comprehension skills, spontaneous speech associated with unarticulated words were understood & translated by family). Behavioral/psychiatric evaluation: solitariness and low social interactions; attention deficit noticed (patient too young to confirm diagnosis of ADHD). Schooling: normal with personal assistance. Sleep disturbances: yes. Brain imaging: normal brain MRI. Auditory evaluation: normal. Dysmorphic features: square coarse face, mild frontal bossing, enophtalmia, low-set ears, anteverted and thick ear lobes, marked philtrum, large nares, thin upper lip, irregular and narrowly-spaced teeth, hypertrichosis on lower region of back. Growth parameters: height and weight on mean curve; macrocephaly (+ 2.5 SD). Family history: second child born to healthy parents; old brother with normal development and schooling; mother with CAS/DVD (patient 2 in this report).
 No intellectual disability; IQ could not be calculated due to disassociation between performances and verbal abilities.
 199696
 3285115
  3085420
 GRCh38
 Deletion
 Yes
  thevenon_12_CAS/DVD_discovery_cases-patient2
 35 yrs.
 F
 CAS/DVD
 Developmental milestones: past history of severe speech delay with speech production troubles; first words at 4 years; intensive speech therapy. Langauge and communication evaluation (orthophonic findings): CAS/DVD (childhood apraxia of speech/); specialized speech evaluation revealed better receptive than expressive abilites, inconsistent errors on consonants and vowels in repeated production of syllables or words with an increase in errors with longer words, impaired ability to repeat nonsense words, and oral apraxia in fine coordinated movement sequence of the mouth, tongue, lips, and eyes. Behavioral/psychiatric evaluation: normal; good social integration. Schooling: difficulties with schooling, but did not attend a special needs school; no high school diploma, but followed vocational course. Family history: son with CAS/DVD (patient 1 in this report).
 No intellectual disability. IQ of 89 (WAIS-III, IVQ of 86 with VCI 92, WMI of 94, IPQ of 96 with OPI of 95 and PSI of 102).
 199696
 3285115
  3085420
 GRCh38
 Deletion
 Yes
  thevenon_12_CAS/DVD_discovery_cases-patient9
 11 yrs.
 M
 CAS/DVD and intellectual disability
 Birth/neonatal history: pregnancy marked by IUGR (intra-uterine growth retardation). Developmental milestones: initial presentation at 4 years with speech delay and normal motor skills; sitting acquired at 7 months, walking at 16 months; first words between 36-40 months; first sentences at 8 years. Langauge and communication evaluation (orthophonic findings): CAS/DVD (childhood apraxia of speech/developmental verbal dyspraxia); speech production troubles contrasting with better lexical acquisition; oro-facial apraxia associated with poor intelligibility of speech; frequent sound omissions and vowel errors; speech only understood by parents. Motor and musculoskeletal evaluation: moderate joint laxity; poor fine motor skills. Behavioral/psychiatric evaluation: abnormal behavior. Schooling: special needs. Other medical concerns and comorbidities: chronic otitis diagnosed, grommets implanted. Dysmorphic features: hypotelorism, microcephaly with a prominent metopic suture, brittle first toe nails. Growth parameters: height and weight +1 SD, persistent microcephaly (OFC -2.2 SD). Family history: mother had personal history of speech delay with no consequences on education or professional career.
 Intellectual disability
 183966
 4810852
  4626887
 GRCh38
 Deletion
 Yes

Controls

No Control Data Available

Cases

Patient ID
Validation Description
Primary Disorder Inheritence
Inheritence
Family Profile
Disease Segregation
Gene Content
Altered Gene Expression
 battaglia_13_DD/ID/ASD_discovery_cases-case50
 FISH or qPCR
 
 De novo
 Unknown
 Unknown
 LINC02371,IQSEC3P1,RPL23AP14,CBX3P4,RNU6-1315P,TSPAN9-IT1,LINC02417,RNU6-174P,OTUD4P1,ITFG2-AS1,FKBP4,ITFG2,NRIP2,TEX52,FOXM1,RHNO1,TULP3,TEAD4,PRMT8,CRACR2A,PARP11,CACNA1C,TSPAN9
 
 hiraide_21_ASD/DD/ID_discovery_cases-case2117
 aCGH, RT-qPCR
 
 De novo
 
 
 CACNA1C,CCND2,FKBP4,FOXM1,FGF6,PARP11,PRMT8,ITFG2,C12orf4,TIGAR,WNK1,ADIPOR2,CCDC77,WNT5B,RHNO1,NRIP2,CACNA2D4,CRACR2A,FBXL14,DCP1B,B4GALNT3,ITFG2-AS1,RPL23AP14,OTUD4P1,HSPA8P5,IQSEC3,LRTM2,RPS4XP14,NINJ2-AS1,NINJ2,IQSEC3P1,LINC00940,LINC00942,HTR1DP1,MIR3649,CACNA1C-AS1,CACNA1C-AS2,CBX3P4,CACNA1C-IT2,TSPAN9-IT1,CACNA1C-AS4,CACNA1C-IT3,KDM5A,RAD52,SLC6A12-AS1,TEX52,LINC02417,LINC02455,PARP11-AS1,CCND2-AS1,LINC02827,CACNA1C-AS3,TEAD4,SLC6A12,SLC6A13,TULP3,RNU6-174P,RNU4ATAC16P,RNU6-1315P,RNU7-103P,LINC02371,CACNA1C-IT1,FGF23,TSPAN9,ERC1
 
 kaminsky_11_DD/ID/ASD_discovery_cases-ISCA00000257
 FISH, qPCR, MLPA, aCGH, or standard G-banded chromosome analysis
 
 De novo
 Unknown
 Unknown
 RNU7-103P,LINC02455,RNU4ATAC16P,HTR1DP1,LINC00942,MIR3649,RPS4XP14,CACNA1C-IT1,CACNA1C-IT2,CACNA1C-AS4,LINC02371,IQSEC3P1,RPL23AP14,CBX3P4,RNU6-1315P,TSPAN9-IT1,LINC02417,RNU6-174P,OTUD4P1,SLC6A12,KDM5A,LINC00940,CACNA1C-IT3,CACNA1C-AS3,CACNA1C-AS2,CACNA1C-AS1,ITFG2-AS1,FKBP4,ITFG2,NRIP2,TEX52,FOXM1,IQSEC3,SLC6A13,CCDC77,B4GALNT3,NINJ2,WNK1,RAD52,WNT5B,FBXL14,ADIPOR2,CACNA2D4,LRTM2,DCP1B,RHNO1,TULP3,TEAD4,PRMT8,CRACR2A,PARP11,ERC1,CACNA1C,TSPAN9
 
 kaminsky_11_DD/ID/ASD_discovery_cases-ISCA00001171
 FISH, qPCR, MLPA, aCGH, or standard G-banded chromosome analysis
 
 Unknown
 Unknown
 Unknown
 LINC02371,IQSEC3P1,RPL23AP14,CBX3P4,RNU6-1315P,TSPAN9-IT1,LINC02417,RNU6-174P,OTUD4P1,HSPA8P5,KCNA6,CACNA1C-AS3,CACNA1C-AS2,CACNA1C-AS1,ITFG2-AS1,FKBP4,ITFG2,NRIP2,TEX52,FOXM1,CCND2-AS1,CCND2,FGF23,FGF6,C12orf4,RAD51AP1,AKAP3,NDUFA9,RHNO1,TULP3,TEAD4,PRMT8,CRACR2A,PARP11,TIGAR,DYRK4,GAU1,GALNT8,CACNA1C,TSPAN9
 
 kaminsky_11_DD/ID/ASD_discovery_cases-ISCA00003895
 FISH, qPCR, MLPA, aCGH, or standard G-banded chromosome analysis
 
 Unknown
 Unknown
 Unknown
 CACNA1C-IT1,CACNA1C-IT2,CACNA1C-AS4,LINC02371,IQSEC3P1,RPL23AP14,CBX3P4,RNU6-1315P,TSPAN9-IT1,LINC02417,RNU6-174P,OTUD4P1,HSPA8P5,LINC00940,CACNA1C-IT3,CACNA1C-AS3,CACNA1C-AS2,CACNA1C-AS1,ITFG2-AS1,FKBP4,ITFG2,NRIP2,TEX52,FOXM1,ADIPOR2,CACNA2D4,LRTM2,DCP1B,RHNO1,TULP3,TEAD4,PRMT8,CRACR2A,PARP11,CACNA1C,TSPAN9
 
 kaminsky_11_DD/ID/ASD_discovery_cases-ISCA00003992
 FISH, qPCR, MLPA, aCGH, or standard G-banded chromosome analysis
 
 Unknown
 Unknown
 Unknown
 RNU7-103P,LINC02455,RNU4ATAC16P,HTR1DP1,LINC00942,MIR3649,RPS4XP14,CACNA1C-IT1,CACNA1C-IT2,CACNA1C-AS4,LINC02371,IQSEC3P1,RPL23AP14,CBX3P4,RNU6-1315P,TSPAN9-IT1,SLC6A12,KDM5A,LINC00940,CACNA1C-IT3,CACNA1C-AS3,CACNA1C-AS2,CACNA1C-AS1,ITFG2-AS1,FKBP4,ITFG2,NRIP2,TEX52,FOXM1,SLC6A13,CCDC77,B4GALNT3,NINJ2,WNK1,RAD52,WNT5B,FBXL14,ADIPOR2,CACNA2D4,LRTM2,DCP1B,RHNO1,TULP3,TEAD4,ERC1,CACNA1C,TSPAN9
 
 martucci_23_ASD_discovery_cases-case17
 RT-PCR
 
 De novo
 Simplex
 Segregated
 CACNA1C,FKBP4,FOXM1,ITFG2,PRMT8,NRIP2,RHNO1,CRACR2A,ITFG2-AS1,RPL23AP14,IQSEC3P1,CACNA1C-AS1,CACNA1C-AS4,CACNA1C-IT3,TSPAN9-IT1,CBX3P4,CACNA1C-AS2,TEX52,LINC02417,LINC02827,CACNA1C-AS3,TEAD4,TULP3,RNU6-1315P,LINC02371,TSPAN9
 
 massier_24_ASD/ADHD/DD/ID_discovery_cases-caseFam15_P24
 
 
 Unknown
 
 
 CACNA1C,FKBP4,FOXM1,ITFG2,PRMT8,ADIPOR2,WNK1,NRIP2,WNT5B,RHNO1,CCDC77,CACNA2D4,FBXL14,DCP1B,ITFG2-AS1,B4GALNT3,RPL23AP14,IQSEC3,LRTM2,NINJ2-AS1,RPS4XP14,NINJ2,IQSEC3P1,LINC00940,LINC00942,HTR1DP1,MIR3649,CACNA1C-AS1,CACNA1C-AS4,CACNA1C-IT3,TSPAN9-IT1,CBX3P4,CACNA1C-AS2,KDM5A,RAD52,SLC6A12-AS1,TEX52,LINC02417,LINC02827,LINC02455,CACNA1C-AS3,TEAD4,SLC6A12,TULP3,SLC6A13,RNU4ATAC16P,RNU7-103P,RNU6-1315P,LINC02371,CACNA1C-IT1,TSPAN9,ERC1
 
 miyake_23_ASD_discovery_cases-case11954
 qPCR
 
 Paternal
 
 
 CACNA1C,FKBP4,FOXM1,ITFG2,PRMT8,NRIP2,RHNO1,ITFG2-AS1,RPL23AP14,IQSEC3P1,CACNA1C-AS1,TSPAN9-IT1,CBX3P4,CACNA1C-AS2,TEX52,LINC02417,LINC02827,CACNA1C-AS3,TEAD4,TULP3,RNU6-1315P,LINC02371,TSPAN9
 
 poultney_13_ASD_discovery_cases-case99HI0694B
 
 
 Unknown
 Unknown (likely multiplex/AGRE)
 Unknown
 RNU6-1315P,TSPAN9-IT1,ITFG2,NRIP2,TEX52,FOXM1,RHNO1,TULP3,TEAD4,TSPAN9
 
 sansovic_17_DD/ID/ASD_discovery_cases-case6
 
 
 Paternal
 
 
 RNU7-103P,LINC02455,RNU4ATAC16P,HTR1DP1,LINC00942,MIR3649,RPS4XP14,CACNA1C-IT1,CACNA1C-IT2,CACNA1C-AS4,LINC02371,IQSEC3P1,RPL23AP14,CBX3P4,RNU6-1315P,TSPAN9-IT1,LINC02417,RNU6-174P,OTUD4P1,HSPA8P5,KCNA6,SLC6A12,KDM5A,LINC00940,CACNA1C-IT3,CACNA1C-AS3,CACNA1C-AS2,CACNA1C-AS1,ITFG2-AS1,FKBP4,ITFG2,NRIP2,TEX52,FOXM1,CCND2-AS1,CCND2,FGF23,FGF6,C12orf4,RAD51AP1,AKAP3,NDUFA9,IQSEC3,SLC6A13,CCDC77,B4GALNT3,NINJ2,WNK1,RAD52,WNT5B,FBXL14,ADIPOR2,CACNA2D4,LRTM2,DCP1B,RHNO1,TULP3,TEAD4,PRMT8,CRACR2A,PARP11,TIGAR,DYRK4,GAU1,GALNT8,ERC1,CACNA1C,TSPAN9
 
 thevenon_12_CAS/DVD_discovery_cases-patient1
 qPCR
 Maternal
 Maternal
 Simplex
 Segregated
 RNU7-103P,LINC02455,RNU4ATAC16P,HTR1DP1,LINC00942,MIR3649,RPS4XP14,CACNA1C-IT1,CACNA1C-IT2,CACNA1C-AS4,LINC02371,IQSEC3P1,RPL23AP14,CBX3P4,RNU6-1315P,TSPAN9-IT1,SLC6A12,KDM5A,LINC00940,CACNA1C-IT3,CACNA1C-AS3,CACNA1C-AS2,CACNA1C-AS1,ITFG2-AS1,FKBP4,ITFG2,NRIP2,TEX52,FOXM1,SLC6A13,CCDC77,B4GALNT3,NINJ2,WNK1,RAD52,WNT5B,FBXL14,ADIPOR2,CACNA2D4,LRTM2,DCP1B,RHNO1,TULP3,TEAD4,ERC1,CACNA1C,TSPAN9
 
 thevenon_12_CAS/DVD_discovery_cases-patient2
 qPCR or FISH
 
 De novo
 Unknown
 Possibly segregated
 RNU7-103P,LINC02455,RNU4ATAC16P,HTR1DP1,LINC00942,MIR3649,RPS4XP14,CACNA1C-IT1,CACNA1C-IT2,CACNA1C-AS4,LINC02371,IQSEC3P1,RPL23AP14,CBX3P4,RNU6-1315P,TSPAN9-IT1,SLC6A12,KDM5A,LINC00940,CACNA1C-IT3,CACNA1C-AS3,CACNA1C-AS2,CACNA1C-AS1,ITFG2-AS1,FKBP4,ITFG2,NRIP2,TEX52,FOXM1,SLC6A13,CCDC77,B4GALNT3,NINJ2,WNK1,RAD52,WNT5B,FBXL14,ADIPOR2,CACNA2D4,LRTM2,DCP1B,RHNO1,TULP3,TEAD4,ERC1,CACNA1C,TSPAN9
 
 thevenon_12_CAS/DVD_discovery_cases-patient9
 qPCR or FISH
 
 De novo
 Unknown
 Possibly segregated
 RNU7-103P,LINC02455,RNU4ATAC16P,HTR1DP1,LINC00942,MIR3649,RPS4XP14,CACNA1C-IT1,CACNA1C-IT2,CACNA1C-AS4,LINC02371,IQSEC3P1,RPL23AP14,CBX3P4,RNU6-1315P,TSPAN9-IT1,LINC02417,RNU6-174P,OTUD4P1,HSPA8P5,KCNA6,SLC6A12,KDM5A,LINC00940,CACNA1C-IT3,CACNA1C-AS3,CACNA1C-AS2,CACNA1C-AS1,ITFG2-AS1,FKBP4,ITFG2,NRIP2,TEX52,FOXM1,CCND2-AS1,CCND2,FGF23,FGF6,C12orf4,RAD51AP1,AKAP3,NDUFA9,SLC6A13,CCDC77,B4GALNT3,NINJ2,WNK1,RAD52,WNT5B,FBXL14,ADIPOR2,CACNA2D4,LRTM2,DCP1B,RHNO1,TULP3,TEAD4,PRMT8,CRACR2A,PARP11,TIGAR,DYRK4,GAU1,GALNT8,ERC1,CACNA1C,TSPAN9
 

Controls

No Control Data Available
No Animal Model Data Available
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