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Relevance to Autism

A de novo splice-site variant in the XRCC6 gene was identified in a female ASD proband from a simplex family (Sjaarda et al., 2020); the authors of this report noted that there were 55 CNVs reported in the DECIPHER database that affect XRCC6 (28 of these individuals presented intellectual disability and five presented autism or autistic behavior). Additional rare de novo non-coding variants in this gene were identified in ASD probands from the Simons Simplex Collection in Turner et al., 2017.

Molecular Function

The p70/p80 autoantigen is a nuclear complex consisting of two subunits with molecular masses of approximately 70 and 80 kDa. The complex functions as a single-stranded DNA-dependent ATP-dependent helicase. The complex may be involved in the repair of nonhomologous DNA ends such as that required for double-strand break repair, transposition, and V(D)J recombination.

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References

Type
Title
Type of Disorder
Associated Disorders
Author, Year
Primary
Exome sequencing identifies de novo splicing variant in XRCC6 in sporadic case of autism
ASD
Support
Genomic Patterns of De Novo Mutation in Simplex Autism
ASD

Rare

Variant ID
Variant Type
Allele Change
Residue Change
Inheritance Pattern
Inheritance Association
Family Type
Author, Year
 GEN1188R001 
 splice_site_variant 
 T>G 
 p.? 
 De novo 
  
 Simplex 
 GEN1188R002 
 intron_variant 
 c.82+2495T>G 
  
 De novo 
  
 Simplex 
 GEN1188R003 
 intron_variant 
 c.82+2588T>C 
  
 De novo 
  
 Simplex 
 GEN1188R004 
 intron_variant 
 c.82+2588T>C 
  
 De novo 
  
 Simplex 
 GEN1188R005 
 intron_variant 
 c.773+2694A>G 
  
 De novo 
  
 Simplex 

Common

No Common Variants Available
Chromosome
CNV Locus
CNV Type
# of studies
Animal Model
22
Duplication
 1
 
22
Duplication
 1
 
22
Duplication
 3
 
22
Deletion-Duplication
 16
 

No Animal Model Data Available

 

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