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Relevance to Autism

A homozygous deletion adjacent to the UNC5D gene that overlapped with a non-coding epigenetic mark was identified in an ASD proband born to consanguineous parents from the HMCA cohort (Schmitz-Abe et al., 2020). A region of homozygosity (ROH) segment overlapping the UNC5D gene had previously been identified in four ASD probands from the Simons Simplex Collection and no unaffected siblings (Gamsiz et al. 2013), and rare inherited intergenic deletions upstream of UNC5D that overlapped a human expressed sequence tag (EST) had previously been observed in four unrelated ASD probands in Walker and Scherer, 2013.

Molecular Function

Receptor for the netrin NTN4 that promotes neuronal cell survival. Plays a role in cell-cell adhesion and cell guidance. Receptor for netrin involved in cell migration. Plays a role in axon guidance by mediating axon repulsion of neuronal growth cones in the developing nervous system upon ligand binding. May play a role in apoptosis in response to DNA damage. It also acts as a dependence receptor required for apoptosis induction when not associated with netrin ligand. Mediates cell-cell adhesion via its interaction with FLRT3 on an adjacent cell.

External Links

        

References

Type
Title
Type of Disorder
Associated Disorders
Author, Year
Primary
Homozygous deletions implicate non-coding epigenetic marks in Autism spectrum disorder
ASD
Support
Intellectual disability is associated with increased runs of homozygosity in simplex autism
ASD
Support
Integrating de novo and inherited variants in 42
ASD
Support
Identification of candidate intergenic risk loci in autism spectrum disorder.
ASD

Rare

Variant ID
Variant Type
Allele Change
Residue Change
Inheritance Pattern
Inheritance Association
Family Type
Author, Year
 GEN1220R001a 
 copy_number_loss 
  
  
 Familial 
 Both parents 
 Simplex 
 GEN1220R002 
 copy_number_loss 
  
  
 Familial 
 Maternal 
 Simplex 
 GEN1220R003 
 copy_number_loss 
  
  
 Familial 
 Maternal 
 Simplex 
 GEN1220R004 
 copy_number_loss 
  
  
 Familial 
 Paternal 
 Simplex 
 GEN1220R005 
 copy_number_loss 
  
  
 Familial 
 Paternal 
 Simplex 
 GEN1220R006 
 missense_variant 
 c.184G>A 
 p.Asp62Asn 
 De novo 
  
  
 GEN1220R007 
 missense_variant 
 c.2102G>A 
 p.Cys701Tyr 
 De novo 
  
  
 GEN1220R008 
 missense_variant 
 c.2366G>A 
 p.Arg789His 
 De novo 
  
 Simplex 
 GEN1220R009 
 missense_variant 
 c.1285C>A 
 p.Gln429Lys 
 De novo 
  
 Multiplex 

Common

No Common Variants Available
Chromosome
CNV Locus
CNV Type
# of studies
Animal Model
8
Deletion-Duplication
 14
 
8
Duplication
 1
 
8
Deletion-Duplication
 2
 
8
Duplication
 1
 
8
Duplication
 1
 
8
Duplication
 1
 
8
Duplication
 1
 
8
Duplication
 1
 
8
Duplication
 5
 
8
Duplication
 3
 
8
Duplication
 5
 
8
Duplication
 1
 
8
Duplication
 1
 

No Animal Model Data Available

No PIN Data Available
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