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8p12-p11.1CNV Type: Duplication


Largest CNV size: 7909899 bp

Statistics Box:
Number of Reports: 1



Summary Information

A de novo 8p12-p11.1 duplication was identified in an ASD proband from a simplex family in Guo et al., 2018.

Additional Locus Information

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USCS Symbol             NCBI Symbol

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            Decipher Symbol

References

Major Reports

Title
Author, Year
Report Class
CNV Type
Genome sequencing identifies multiple deleterious variants in autism patients with more severe phenotypes.
Duplication

Minor Reports

Title
Author, Year
Report Class
CNV Type

No Minor Reports

Cases

Cohort ID
Author, Year
Descripton
Cohort Size
Diagnosis
Age
Gender
CNV Size
Deletion
Duplication
Total CNV's
 guo_18_ASD/DD/ID_discovery_cases
 Patients from 180 families (153 simplex, 27 multiplex) with at least one proband diagnosed with ASD who had been been clinically evaluated at the Seattle Children's Autism Center from SAGE collection
 213
 Patients were ascertained based on the presence of a diagnosis of ASD, intellectual disability (ID) or developmental delay (DD). ASD diagnoses were confirmed by meeting cutoff criteria on the Autism Diagnostic Observation Schedule and DSM-5 criteria; cognitive abilities were assessed using age-appropriate cognitive batteries, including DAS-2, Wechsler tests (WPPSI-IV, WISC-V, WASI-2), and Mullen.
 N/A
 N/A
 7909899
 0
 1
 1

Controls

No Control Data Available

Cases

Cohort ID
Geographical Ancestry
Discovery Method
Platform
Algorithm
Software
Validation Method
 guo_18_ASD/DD/ID_discovery_cases
  N/A
 WGS
  Illumina HiSeq X Ten
 dCGH, Genome STRiP, LUMPY, WHAMG, CNVnator, DELLY
 
 aCGH, Sanger sequencing

Controls

No Control Data Available

Cases

Patient ID
Author, Year
Age
Gender
Primary Diagnosis
Clinical Profile
Cognitive Profile
CNV Start
CNV End
CNV Size
Genome Build
Type Method
Validation
  guo_18_ASD/DD/ID_discovery_cases-caseBK-132-03
 N/A
 F
 ASD
 GI problems
 FSIQ 85, NVIQ 89, VIQ 85
 35779804
 43689703
  7909900
 GRCh38
 Duplication
 Yes

Controls

No Control Data Available

Cases

Patient ID
Validation Description
Primary Disorder Inheritence
Inheritence
Family Profile
Disease Segregation
Gene Content
Altered Gene Expression
 guo_18_ASD/DD/ID_discovery_cases-caseBK-132-03
 aCGH, Sanger sequencing
 
 De novo
 Simplex
 Segregated
 MTCYBP19,MTND6P19,MTND5P41,RNU6-533P,RPL23P10,RNA5SP264,TPT1P8,SMARCE1P4,RNU6-607P,RN7SL709P,GOT1L1,ADRB3,RPL12P48,RNU6-988P,STAR,RNU6-323P,PLPP5,RPS20P22,TCIM,RNU6-356P,MIR548AO,RPS29P2,RNU6-895P,SNORD65B,KRT18P37,MIR486-1,MIR486-2,RN7SL149P,RPL5P23,DKK4,THAP1,RN7SL806P,MIR4469,VN1R46P,AFG3L2P1,RNU6-104P,SNX18P27,CYP4F44P,ZNF703,PLPBP,ADGRA2,BRF2,EIF4EBP1,LSM1,BAG4,RNF5P1,HTRA4,TM2D2,RPL3P10,ADAM2,IDO1,SIRLNT,GOLGA7,GINS4,GPAT4,NKX6-3,AP3M2,IKBKB,POLB,VDAC3,SMIM19,CHRNA6,FNTA,RNU1-124P,HGSNAT,POTEA,KCNU1,LINC01605,RAB11FIP1,ASH2L,DDHD2,NSD3,LETM2,FGFR1,C8orf86,PLEKHA2,ADAM9,ADAM32,ADAM5,ADAM3A,ADAM18,IDO2,SFRP1,ANK1,PLAT,SLC20A2,CHRNB3,RNF170,POMK,UNC5D,ERLIN2,TACC1,ZMAT4,HOOK3,KAT6A
 

Controls

No Control Data Available
No Animal Model Data Available
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