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Relevance to Autism

Dardas et al., 2025 described a cohort of 15 individuals from 10 unrelated families with bialleic variants in the UGGT1 gene presenting with a phenotypic spectrum ranging from fetal demise/infantile death and multiorgan system involvement to a complex syndromic neurodevelopmental disorder characterized by severe global developmental delay/intellectual disability, dysmorphic features, microcephaly, seizures, and behavioral traits including autism and stereotyped movements; functional studies of UGGT1 variants identified in affected individuals demonstrated diverse pathogenic mechanisms, inlcuding impaired UGGT1 glucosylation and catalyic activity, disrupted mRNA splicing, or inhibited endoplasmic reticulum retention. Multiple de novo variants in UGGT1, including two de novo loss-of-function variants, have been reported in ASD probands from the Autism Sequencing Consortium, the Simons Simplex Collection, and the SPARK cohort (De Rubeis et al., 2014; Iossifov et al., 2014; Zhou et al., 2022; Trost et al., 2022).

Molecular Function

UDP-glucose:glycoprotein glucosyltransferase (UGT) is a soluble protein of the endoplasmic reticulum (ER) that selectively reglucosylates unfolded glycoproteins, thus providing quality control for protein transport out of the ER.

External Links

        

References

Type
Title
Type of Disorder
Associated Disorders
Author, Year
Primary
Bi-allelic UGGT1 variants cause a congenital disorder of glycosylation
DD, ID, epilepsy/seizures
ASD, stereotypy, ADHD
Support
Synaptic, transcriptional and chromatin genes disrupted in autism.
ASD
Support
Genomic architecture of autism from comprehensive whole-genome sequence annotation
ASD
Support
Integrating de novo and inherited variants in 42
ASD
Support
The contribution of de novo coding mutations to autism spectrum disorder
ASD

Rare

Variant ID
Variant Type
Allele Change
Residue Change
Inheritance Pattern
Inheritance Association
Family Type
Author, Year
 GEN1499R001a 
 stop_gained 
 c.381_384del 
 p.Tyr127Ter 
 Familial 
 Paternal 
 Simplex 
 GEN1499R001b 
 inframe_deletion 
 c.1168_1191del 
 p.Asp390_Gly397del 
 Familial 
 Maternal 
 Simplex 
 GEN1499R002a 
 missense_variant 
 c.3464A>G 
 p.Gln1155Arg 
 Unknown 
  
 Simplex 
 GEN1499R003a 
 frameshift_variant 
 c.978_979del 
 p.Ser327PhefsTer13 
 Familial 
 Both parents 
 Multiplex 
 GEN1499R004a 
 frameshift_variant 
 c.4081dupC 
 p.Gln1361ProfsTer27 
 Familial 
 Maternal 
 Simplex 
 GEN1499R004b 
 missense_variant 
 c.2168T>C 
 p.Phe723Ser 
 Familial 
 Paternal 
 Simplex 
 GEN1499R005a 
 stop_gained 
 c.4636C>T 
 p.Arg1546Ter 
 Unknown 
  
 Simplex 
 GEN1499R006a 
 stop_gained 
 c.4636C>T 
 p.Arg1546Ter 
 Familial 
 Both parents 
 Multiplex 
 GEN1499R007a 
 missense_variant 
 c.3815G>A 
 p.Arg1272His 
 Familial 
 Both parents 
 Simplex 
 GEN1499R008a 
 missense_variant 
 c.2132C>T 
 p.Ala711Val 
 Familial 
 Both parents 
 Multiplex 
 GEN1499R009a 
 stop_gained 
 c.4636C>T 
 p.Arg1546Ter 
 Familial 
 Both parents 
 Multiplex 
 GEN1499R010a 
 stop_gained 
 c.4636C>T 
 p.Arg1546Ter 
 Familial 
 Both parents 
 Simplex 
 GEN1499R011 
 inframe_deletion 
 c.2489_2491del 
 p.Ile830del 
 De novo 
  
  
 GEN1499R012 
 missense_variant 
 c.3998G>A 
 p.Arg1333His 
 De novo 
  
 Simplex 
 GEN1499R013 
 missense_variant 
 c.656A>G 
 p.Asn219Ser 
 De novo 
  
  
 GEN1499R014 
 splice_site_variant 
 c.3105-1G>C 
 p.? 
 De novo 
  
  
 GEN1499R015 
 synonymous_variant 
 c.4362T>C 
 p.Asp1454= 
 De novo 
  
  
 GEN1499R016 
 stop_gained 
 c.2110C>T 
 p.Arg704Ter 
 De novo 
  
  

Common

No Common Variants Available
Chromosome
CNV Locus
CNV Type
# of studies
Animal Model
2
Duplication
 1
 
2
Duplication
 1
 
2
Deletion
 1
 
2
Deletion-Duplication
 19
 
2
Duplication
 2
 
2
Duplication
 1
 

No Animal Model Data Available

 

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