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Relevance to Autism

Screening of 9q33.1 copy number variants disrupting ASTN2 or both ASTN2 and TRIM32 in clinical microarray data from 89,986 individuals across 10 sites, including 64,114 subjects with neurodevelopmental disorders (NDD), in Lionel et al., 2014 found that deletions affecting both ASTN2 and TRIM32 were statistically enriched in NDD cases compared to controls (23 deletions in 64,114 cases vs. 6 in 44,085 controls; P-value 0.019); this enrichment was subsequently determined to be male-specific [22 deletions in 40,438 NDD males vs. 2 deletions in 14,953 male controls (P-value 0.024) compared to 1 deletion in 23.676 NDD females vs. 3 deletions in 18.218 female controls (P-value 0.964)]. Zhu et al., 2019 found that absence of TRIM32 resulted in impaired generation of GABAergic interneurons and autism-like behaviors in mice via suppressed mTOR signaling.

Molecular Function

The protein encoded by this gene is a member of the tripartite motif (TRIM) family and has an E3 ubiquitin ligase activity. The protein localizes to cytoplasmic bodies and has also been localized to the nucleus, where it interacts with the activation domain of the HIV-1 Tat protein.

External Links

        

References

Type
Title
Type of Disorder
Associated Disorders
Author, Year
Primary
Absence of TRIM32 Leads to Reduced GABAergic Interneuron Generation and Autism-like Behaviors in Mice via Suppressing mTOR Signaling.
ASD
Support
Disruption of the ASTN2/TRIM32 locus at 9q33.1 is a risk factor in males for autism spectrum disorders, ADHD and other neurodevelopmental phenotypes.
ASD
ADHD, DD, ID, epilepsy, OCD
Support
The E3 ligase Thin controls homeostatic plasticity through neurotransmitter release repression
Support
TRIM32 Deficiency Impairs the Generation of Pyramidal Neurons in Developing Cerebral Cortex
Support
Rare genetic susceptibility variants assessment in autism spectrum disorder: detection rate and practical use.
ASD

Rare

Variant ID
Variant Type
Allele Change
Residue Change
Inheritance Pattern
Inheritance Association
Family Type
Author, Year
 GEN1142R001 
 copy_number_loss 
  
  
 Familial 
 Maternal 
  
 GEN1142R002 
 copy_number_loss 
  
  
 Familial 
 Paternal 
  
 GEN1142R003 
 copy_number_loss 
  
  
 Unknown 
  
  
 GEN1142R004 
 copy_number_loss 
  
  
 De novo 
  
  
 GEN1142R005 
 copy_number_loss 
  
  
 Unknown 
  
  
 GEN1142R006 
 copy_number_loss 
  
  
 Unknown 
  
  
 GEN1142R007 
 copy_number_loss 
  
  
 Familial 
 Maternal 
  
 GEN1142R008 
 copy_number_loss 
  
  
 Familial 
 Maternal 
  
 GEN1142R009 
 copy_number_loss 
  
  
 Unknown 
  
  
 GEN1142R010 
 copy_number_loss 
  
  
 Unknown 
  
  
 GEN1142R011 
 copy_number_loss 
  
  
 Familial 
 Maternal 
  
 GEN1142R012 
 copy_number_loss 
  
  
 Unknown 
  
  
 GEN1142R013 
 copy_number_loss 
  
  
 Unknown 
  
  
 GEN1142R014 
 copy_number_loss 
  
  
 Unknown 
  
  
 GEN1142R015 
 copy_number_loss 
  
  
 Unknown 
  
 Multiplex 
 GEN1142R016 
 copy_number_loss 
  
  
 Unknown 
  
  
 GEN1142R017 
 copy_number_loss 
  
  
 Unknown 
  
  
 GEN1142R018 
 copy_number_loss 
  
  
 Unknown 
  
 Simplex 
 GEN1142R019 
 copy_number_loss 
  
  
 Familial 
 Maternal 
 Multiplex 
 GEN1142R020 
 copy_number_loss 
  
  
 Unknown 
  
  
 GEN1142R021 
 copy_number_loss 
  
  
 Familial 
 Paternal 
  
 GEN1142R022 
 copy_number_loss 
  
  
 Unknown 
  
  
 GEN1142R023 
 copy_number_loss 
  
  
 Familial 
 Paternal 
 Simplex 
 GEN1142R024 
 copy_number_loss 
  
  
 Familial 
 Maternal 
 Unknown 
 GEN1142R025 
 copy_number_loss 
  
  
 Familial 
 Paternal 
  
 GEN1142R026 
 copy_number_loss 
  
  
 Familial 
 Maternal 
 Simplex 
 GEN1142R027 
 copy_number_loss 
  
  
 Unknown 
  
  
 GEN1142R028 
 copy_number_loss 
  
  
 Unknown 
  
  
 GEN1142R029 
 missense_variant 
  
 p.Arg201Cys 
 Familial 
 Paternal 
  
 GEN1142R030 
 copy_number_loss 
  
  
 Familial 
 Maternal 
 Multiplex 

Common

No Common Variants Available
Chromosome
CNV Locus
CNV Type
# of studies
Animal Model
9
Duplication
 1
 
9
Deletion
 2
 
9
Deletion-Duplication
 21
 
9
Deletion-Duplication
 30
 
9
Deletion
 1
 

Model Summary

In mice, deficiency of TRIM32 results in decreased proliferation of GABAergic interneurons, increased autophagy, and autism-like behaviors in mice including decreased social interaction, increased repetitive behaviors, and hyperactivity. Increased autophagy in TRIM32 KO mice can be rescued by treatment embryonically with 3BDO, an mTOR activator. Transplantation of M/LGE progenitors or treatment postnatally with clonazepam, an agonist of the GABAA receptor, rescues the hyperexcitability and the autistic behaviors of TRIM32 KO mice.

References

Type
Title
Author, Year
Primary
Absence of TRIM32 Leads to Reduced GABAergic Interneuron Generation and Autism-like Behaviors in Mice via Suppressing mTOR Signaling.
Additional
Deficiency of TRIM32 Impairs Motor Function and Purkinje Cells in Mid-Aged Mice

M_TRIM32_1_HM_KO

Model Type: Genetic
Model Genotype: Homozygous
Mutation: The 5 kb genomic fragment containing exon 2 of TRIM32 was replaced with an SA-IRES-beta-geopA expression cassette.
Allele Type: Knockout
Strain of Origin: 129S1
Genetic Background: 129S1
ES Cell Line: Not specified
Mutant ES Cell Line: R1 ES cells
Model Source: Nicklas et al, 2012 (PMID 22299041)

M_TRIM32_1_HM_KO

Category
Entity
Quantity
Experimental Paradigm
Age at Testing
Motor coordination and balance2
decreased
Description: Increased time spent crossing the beam, freeze time, and number of paw slips
 Balance beam test
 10m
Grip strength2
decreased
Description: Time to fall slightly decreased in mid-aged mice
 Wire hang test
 10m
Clasping reflex2
increased
Description: Higher hindlimb clasping score
 Tail suspension test
 10m
Motor coordination and balance2
decreased
Description: Greater crossing time and increased numer of foot placement errors
Exp Paradigm: Bioseb instrument
 Horizontal ladder test
 10m
Grip strength2
decreased
Description: Reduced grip strength in young mice
 Traction test
 6m
Motor learning2
decreased
Description: Decreased time to fall off the rotarod on all 6 days
 Accelerating rotarod test
 10m
Motor coordination and balance2
decreased
Description: Difficult for the mice to place the hind paws on the edge and the hindlimbs were clasped while moving forward movement along the edge
 Ledge test
 10m
Grip strength2
decreased
Description: Reduced grip strength in mid-aged mice
 Traction test
 10m
Motor coordination and balance2
decreased
Description: Required more time to turn around and climb down the vertical pole
 Vertical pole test
 10m
Grip strength2
decreased
Description: Time to fall slightly decreased in young mice
 Wire hang test
 6m
Gait2
abnormal
Description: Decreased stride length
 Footprint analysis
 10m
Cerebellar morphology: molecular layer thickness2
decreased
Description: Quantified the thickness of the cerebellar ml and found it was thinner in trim32â??/â?? cerebella compared with the cerebella in wt littermates
Exp Paradigm: HandE staining sagittal sections
 Histology
 10m
Neuronal size2
decreased
Description: Staining of pcs in sagittal sections of the cerebellum revealed significant decreases in the areas occupied by somata
 Golgi-Cox staining
 10m
Anatomical projections and connectivity: purkinje cell-climbing fiber connections2
decreased
Description: Mean fluorescence intensity of vglut1-positive parallel fiber-purkinje cell connections and the number of vglut2-positive climbing fiber-purkinje cell connections were reduced in trim32â??/â?? mice
 Immunohistochemistry
 10m
Dendritic architecture: spine density2
decreased
Description: Dendritic spine density of pcs was clearly decreased in trim32â??/â?? mice
 Golgi-Cox staining
 10m
Cerebellar morphology2
decreased
Description: Quantification of cerebellar outline area showed that the cerebellar area of trim32â??/â?? mice was significantly smaller than area of wt mice
Exp Paradigm: HandE staining sagittal sections
 Histology
 10m
Neuronal number: purkinje cells2
decreased
Description: Number of calbindin-positive pcs was decreased in trim32â??/â?? mice
 Immunohistochemistry
 6m
Dendritic architecture: dendritic tree complexity2
decreased
Description: Distal dendritic arborization of pcs was obviously decreased in trim32â??/â?? mice, as compared with wt mice although there was a slight increase in proximal dendritic arborization
Exp Paradigm: Golgi-Cox staining
 Sholl analysis
 10m
Synapse density: inhibitory1
Decreased
Description: Mutants show decreased numbers of synapses per neuronal soma, which are predominantly inhibitory gabaergic synapses.
Exp Paradigm: Gaba
 Electron microscopy
 5 months
Cerebellar morphology2
decreased
Description: Mild decrease in size of cerebella; no overt gross morphological alternations between mid-aged trim32â??/â?? and wt littermate cerebella
Exp Paradigm: Macroscopic images
 Macroscopic analysis
 10m
Neuronal number: purkinje cells2
decreased
Description: Number of calbindin-positive pcs was decreased in trim32â??/â?? mice
 Immunohistochemistry
 10m
Dendritic architecture: dendritic thickness2
decreased
Description: Staining of pcs in sagittal sections of the cerebellum revealed significant decreases in the areas occupied by dendritic trees
 Golgi-Cox staining
 10m
Synapse density: inhibitory1
Decreased
Description: Mutants show decreased densities of gabaergic inhibitory synapses marked by viaat, and gad67.
Exp Paradigm: Viaat, gad67
 Immunohistochemistry
 3 months
Cell proliferation: neural precursors1
Decreased
Description: Mutants show decrease in proliferation of neural precursor cells in the lge and mge. mutants show decrease in phosphohistone h3 positive cells in the mge at e13.5. mutants show decrease in nkx2.1 positive interneuron progenitors in the mge.
Exp Paradigm: H3, nkx2.1
 Immunohistochemistry
 E13.5
Neuronal number: interneurons1
Decreased
Description: Mutants show decreased numbers of brdu+gaba+ cells born at e13.5 in the hippocampus and the cortex at p18, and decreased numbers of gaba+ and glutamate decarboxylase 67 positive cells in the dentate gyrus at 3 weeks and 4 months. mutants show decrease in the numbers of interneuron subtypes including parvalbumin, calretinin, neuropeptide y, and somatostatin interneuron subtypes in the hippocampus at 3 weeks and 4 months.
Exp Paradigm: Gaba, gad67, pv, clr, npy, sst
 Immunohistochemistry
 E18.5, 3 weeks, 4 months
Spontaneous post synaptic event frequency: inhibitory currents1
Decreased
Description: Mutant pyramidal neurons show a reduction in the sipsc frequency.
Exp Paradigm: NA
 Whole-cell voltage clamp
 3 weeks
Electroencephalogram (eeg) signature1
Increased
Description: Mutants show increased frequency of epileptic spikes in the hippocampus and cortex, indicating hyperexcitability and e/i imbalance.
Exp Paradigm: NA
 Electroencephalogram (eeg)
 4-6 months
Neurotransmitter release: gaba1
Decreased
Description: Mutants show decreased levels of gaba in the hippocampus.
Exp Paradigm: NA
 High-performance liquid chromatography (hplc)
 4 months
Macroautophagy: neuronal1
Increased
Description: Mutants show increase in the levels of microtubule-associated protein 1 light chain 3 (lc3)-ii, an indicator for formation of autophagosomes, in the embryonic mge. this increase of lc-ii is not blocked by chloroquine indicating the increase in lc-ii is not due to impaired autophagic influx.
Exp Paradigm: NA
 Western blot
 E14.5
Macroautophagy: neuronal1
Increased
Description: Mutants show increase in autophagosomes in the lmge progenitors, even during mitosis.
Exp Paradigm: NA
 Electron microscopy
 E14.5
Stereotypy1
Increased
Description: Mutants show increase in the choice of the same arm indicating decrease in spontaneous alternation.
Exp Paradigm: NA
 Y-maze test
 4-6 months
Stereotypy2
increased
Description: Interlimb coordination significantly increased compared to wt mice
 Footprint analysis
 10m
Self grooming: perseveration1
Increased
Description: Mutants spent more time self-grooming.
Exp Paradigm: NA
 Grooming behavior assessments
 3 weeks, 4-6 months
Juvenile play1
Decreased
Description: Mutants spent less time in playing.
Exp Paradigm: NA
 Reciprocal social interaction test
 3 weeks
Social interaction1
Decreased
Description: Mutants spent less time in non-aggressive social interaction with a conspecific.
Exp Paradigm: NA
 Reciprocal social interaction test
 4-6 months
Social approach1
Decreased
Description: Mutants do not spend more time with a conspecific mouse than in an empty cage.
Exp Paradigm: NA
 Three-chamber social approach test
 4-6 months
Nest building behavior1
Decreased
Description: Mutants build poorer nests.
Exp Paradigm: NA
 Nest building assay
 4-6 months
Social memory1
Decreased
Description: Mutants do not spend more time with an unfamiliar conspecific mouse than with a familiar conspecific mouse.
Exp Paradigm: NA
 Three-chamber social approach test
 4-6 months
Size/growth2
increased
Description: Mean body weight higher in young mice
 Body weight measurement
 6m
Size/growth2
increased
Description: Mean body weight higher in mid-aged mice
 Body weight measurement
 10m
Spatial working memory1
Decreased
Description: Mutants show increase in escape latency and swimming path lengths to locate the platform.
Exp Paradigm: NA
 Morris water maze test
 4-6 months
Spatial reference memory1
Decreased
Description: Mutants swam less frequently in the quadrant where the platform was originally located, during the probe trials.
Exp Paradigm: NA
 Morris water maze test
 4-6 months
Object recognition memory1
Decreased
Description: Mutants spent less time exploring the novel object.
Exp Paradigm: NA
 Novel object recognition test
 4-6 months
Protein expression level evidence1
Increased
Description: Mutants show higher levels of rgs10 in the lateral medial ganglionic eminence.
Exp Paradigm: Rgs10
 Mass spectrometry (ms)
 E14.5
Protein expression level evidence2
decreased
Description: Level of calbindin was decreased in the cerebellum in younger trim32â??/â?? mice
 Western blot
 6m
Targeted expression2
decreased
Description: Trim32 was highly expressed in pcs layer (pl) and gcl but no specific immunoreactivity was observed in the trim32â??/â?? cerebellum
 Immunohistochemistry
 10m
Protein expression level evidence2
increased
Description: Ip3 level was increased in the cerebellum in mid-aged trim32â??/â?? mice
 Western blot
 10m
Signaling: mtor pathway1
Decreased
Description: Mutants show reduced levels of rheb-gtp, phosphorylated mtor, p-p70s6k, indicating hypoactive mtor signaling.
Exp Paradigm: Rheb-gtp, p-mtor, p-p70s6k
 Western blot
 E14.5
Protein expression level evidence2
decreased
Description: Inpp5a and calbindin level was decreased in the cerebellum in mid-aged trim32â??/â?? mice when compared to their littermates
 Western blot
 10m
Protein expression level evidence2
 no change
 Western blot
 6m
Motor learning2
 no change
 Accelerating rotarod test
 6m
Swimming ability1
 No change
 Morris water maze test
 4-6 months
Brain anatomy1
 No change
 Histology
 4-6 months
Cerebellar foliation2
 no change
 Histology
 10m
Neuronal number2
 no change
 Immunohistochemistry
 10m
Apoptosis: brain cells1
 No change
 Immunohistochemistry
 E13.5
Spontaneous post synaptic event amplitude: inhibitory currents1
 No change
 Whole-cell voltage clamp
 3 weeks
Repetitive digging1
 No change
 Novel cage test
 3 weeks
Olfaction1
 No change
 Olfactory discrimination test
 4-6 months
Olfaction1
 No change
 Buried food test
 4-6 months
Pain or nociception1
 No change
 Hot plate test
 4-6 months
 Not Reported: Circadian sleep/wake cycle, Communications, Developmental profile, Emotion, Immune response, Maternal behavior, Physiological parameters, Seizure

 

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