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Relevance to Autism

A complex 4 kb deletion in 2q36.3 that removes an exon from the TM4SF20 gene was identified in 15 unrelated families (predominantly from Southeast Asia) that segregated with early childhood communication disorders, ranging from early language delay to autism spectrum disorder, and white matter hyperintensities (WMH) (Wiszniewski et al., 2013).

Molecular Function

This gene encodes a multi-pass membrane protein that belongs to the L6 tetraspanin family.

External Links

        

References

Type
Title
Type of Disorder
Associated Disorders
Author, Year
Primary
TM4SF20 ancestral deletion and susceptibility to a pediatric disorder of early language delay and cerebral white matter hyperintensities.
DD
ASD, epilepsy
Support
Impaired Neurodevelopmental Genes in Slovenian Autistic Children Elucidate the Comorbidity of Autism With Other Developmental Disorders
ASD
ADHD
Support
Integrating de novo and inherited variants in 42
ASD

Rare

Variant ID
Variant Type
Allele Change
Residue Change
Inheritance Pattern
Inheritance Association
Family Type
Author, Year
 GEN566R001 
 copy_number_loss 
  
  
 Familial 
 Maternal 
 Simplex 
 GEN566R002 
 copy_number_loss 
  
  
 Unknown 
  
 Unknown 
 GEN566R003 
 copy_number_loss 
  
  
 Familial 
 Paternal 
 Simplex 
 GEN566R004 
 copy_number_loss 
  
  
 Familial 
 Paternal 
 Simplex 
 GEN566R005 
 copy_number_loss 
  
  
 Familial 
 Maternal 
 Simplex 
 GEN566R006 
 copy_number_loss 
  
  
 Familial 
 Maternal 
 Multiplex 
 GEN566R007 
 copy_number_loss 
  
  
 Familial 
 Maternal 
 Multi-generational 
 GEN566R008 
 copy_number_loss 
  
  
 Familial 
 Paternal 
 Multiplex 
 GEN566R009 
 copy_number_loss 
  
  
 Familial 
 Paternal 
 Multiplex 
 GEN566R010 
 copy_number_loss 
  
  
 Familial 
 Maternal 
 Simplex 
 GEN566R011 
 copy_number_loss 
  
  
 Unknown 
  
 Unknown 
 GEN566R012 
 copy_number_loss 
  
  
 Familial 
 Maternal 
 Simplex 
 GEN566R013 
 copy_number_loss 
  
  
 Familial 
 Paternal 
 Extended multiplex 
 GEN566R014 
 copy_number_loss 
  
  
 Familial 
 Maternal 
 Multiplex 
 GEN566R015 
 copy_number_loss 
  
  
 Familial 
 Maternal 
 Simplex 
 GEN566R016 
 splice_site_variant 
 c.184-2A>T 
  
 Unknown 
 Not maternal 
  
 GEN566R017 
 missense_variant 
 c.532G>A 
 p.Asp178Asn 
 De novo 
  
  
 GEN566R018 
 stop_gained 
 c.152G>A 
 p.Trp51Ter 
 Familial 
 Maternal 
 Multiplex 

Common

No Common Variants Available
Chromosome
CNV Locus
CNV Type
# of studies
Animal Model
2
Duplication
 1
 
2
Duplication
 1
 
2
Deletion-Duplication
 1
 
2
Duplication
 2
 
2
Duplication
 1
 
2
Deletion
 5
 
2
Deletion-Duplication
 22
 
2
Deletion
 1
 
2
Deletion-Duplication
 2
 

No Animal Model Data Available

 

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