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Relevance to Autism

Genetic association has been found between the SYT17 gene and autism in two large cohorts (AGRE and ACC) of European ancestry and replicated in two other cohorts (CAP and CART) (Wang et al., 2009).

Molecular Function

This protein belongs to the synaptotagmin family and contains two C2 domains.

External Links

        

References

Type
Title
Type of Disorder
Associated Disorders
Author, Year
Primary
Common genetic variants on 5p14.1 associate with autism spectrum disorders.
ASD
Positive Association
A genome-wide association study of autism incorporating autism diagnostic interview-revised, autism diagnostic observation schedule, and social res...
ASD

Rare

No Rare Variants Available

Common

Variant ID
Polymorphism
SNP ID
Allele Change
Residue Change
Population Origin
Population Stage
Author, Year
 GEN246C001 
 intron_variant 
 rs9932538 
 c.951+13100A>G;c.939+13100A>G;c.768+13100A>G 
 G/A 
 US and European 
 Discovery 
 GEN246C002 
 intron_variant 
 rs9932538 
 c.951+13100A>G;c.939+13100A>G;c.768+13100A>G 
  
 Discovery cohort: 2165 participants from AGRE 
 Discovery 
Chromosome
CNV Locus
CNV Type
# of studies
Animal Model
16
Deletion-Duplication
 19
 
16
Duplication
 1
 

No Animal Model Data Available


Interactor Symbol Interactor Name Interactor Organism Entrez ID Uniprot ID Interaction Type Evidence Reference
APP amyloid beta (A4) precursor protein 351 P05067 ProtoArray
Olh J , et al. 2011
APTX aprataxin 54840 Q7Z2E3 Y2H; IP/WB
Lim J , et al. 2006
CCDC85B coiled-coil domain containing 85B 11007 Q15834 Y2H
Rual JF , et al. 2005
CEP63 centrosomal protein 63kDa 80254 Q96MT8 Y2H; bimolecular fluorescence complementation assay
Rolland T , et al. 2014
CEP70 centrosomal protein 70kDa 80321 Q8NHQ1 Y2H; bimolecular fluorescence complementation assay
Rolland T , et al. 2014
CHMP4A charged multivesicular body protein 4A 29082 Q9BY43 Y2H
Rual JF , et al. 2005
CHMP4A charged multivesicular body protein 4A 29082 Q9BY43 Y2H; bimolecular fluorescence complementation assay
Rolland T , et al. 2014
FAM9B family with sequence similarity 9, member B 171483 A0A024RBV3 Y2H; bimolecular fluorescence complementation assay
Rolland T , et al. 2014
GMCL1 germ cell-less, spermatogenesis associated 1 64395 Q53SE7 Y2H; bimolecular fluorescence complementation assay
Rolland T , et al. 2014
IKZF1 IKAROS family zinc finger 1 (Ikaros) 10320 Q13422 Y2H; bimolecular fluorescence complementation assay
Rolland T , et al. 2014
MEOX1 mesenchyme homeobox 1 4222 P50221 Y2H; bimolecular fluorescence complementation assay
Rolland T , et al. 2014
MEOX2 Homeobox protein MOX-2 4223 P50222 Y2H; bimolecular fluorescence complementation assay
Rolland T , et al. 2014
MID2 midline 2 11043 Q9UJV3 Y2H; bimolecular fluorescence complementation assay
Rolland T , et al. 2014
MID2 midline 2 11043 Q9UJV3 IP; LC-MS/MS
Huttlin EL , et al. 2015
NIF3L1 NIF3 NGG1 interacting factor 3-like 1 (S. cerevisiae) 60491 Q9GZT8 Y2H; bimolecular fluorescence complementation assay
Rolland T , et al. 2014
NINL ninein-like 22981 Q9Y2I6 Y2H
Rual JF , et al. 2005
RUNDC3A RUN domain containing 3A 10900 Q59EK9 Y2H; bimolecular fluorescence complementation assay
Rolland T , et al. 2014
SSX2IP synovial sarcoma, X breakpoint 2 interacting protein 117178 Q9Y2D8 Y2H; bimolecular fluorescence complementation assay
Rolland T , et al. 2014
TF Serotransferrin 7018 P02787 IP; LC-MS/MS
Huttlin EL , et al. 2015
TRAF2 TNF receptor-associated factor 2 7186 Q12933 Y2H; bimolecular fluorescence complementation assay
Rolland T , et al. 2014
TSC22D4 TSC22 domain family, member 4 81628 Q9Y3Q8 Y2H
Rual JF , et al. 2005

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