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Relevance to Autism

Two novel overlapping CNVs involving the PLXNA4 gene were identified in unrelated ASD cases (Prasad et al., 2012).

Molecular Function

Coreceptor for SEMA3A. Necessary for signaling by class 3 semaphorins and subsequent remodeling of the cytoskeleton. Plays a role in axon guidance in the developing nervous system.

External Links

        

References

Type
Title
Type of Disorder
Associated Disorders
Author, Year
Primary
A discovery resource of rare copy number variations in individuals with autism spectrum disorder.
ASD
Support
Genome-wide detection of tandem DNA repeats that are expanded in autism
ASD
Support
Exonic Mosaic Mutations Contribute Risk for Autism Spectrum Disorder.
ASD
Support
Decreased expression of axon-guidance receptors in the anterior cingulate cortex in autism.
ASD
Recent Recommendation
PlexinA polymorphisms mediate the developmental trajectory of human corpus callosum microstructure.

Rare

Variant ID
Variant Type
Allele Change
Residue Change
Inheritance Pattern
Inheritance Association
Family Type
Author, Year
 GEN497R001 
 copy_number_loss 
  
  
 Familial 
 Paternal 
 Multiplex 
 GEN497R002 
 copy_number_gain 
  
  
 Familial 
 Maternal 
 Multiplex 
 GEN497R003 
 missense_variant 
 c.5351C>T 
 p.Thr1784Met 
 De novo 
  
 Simplex 
 GEN497R004 
 microsatellite 
  
  
 Unknown 
  
 Simplex 
 GEN497R005 
 missense_variant 
 c.3302T>C 
 p.Leu1101Pro 
 De novo 
  
 Simplex 

Common

No Common Variants Available
Chromosome
CNV Locus
CNV Type
# of studies
Animal Model
7
Deletion
 2
 
7
Deletion
 1
 
7
Deletion
 2
 
7
Duplication
 1
 
7
Duplication
 1
 
7
Deletion
 7
 
7
Duplication
 2
 
7
Deletion
 1
 

No Animal Model Data Available


Interactor Symbol Interactor Name Interactor Organism Entrez ID Uniprot ID Interaction Type Evidence Reference
C14ORF104 Protein kintoun 55172 Q9NVR5-2 IP; LC-MS/MS
Huttlin EL , et al. 2015
CRYZL1 crystallin, zeta (quinone reductase)-like 1 9946 O95825 IP; LC-MS/MS
Huttlin EL , et al. 2015
DCT L-dopachrome tautomerase 1638 P40126 IP; LC-MS/MS
Huttlin EL , et al. 2015
NTRK1 neurotrophic tyrosine kinase, receptor, type 1 4914 P04629 IP/WB; Co-localization
Yamashita N , et al. 2016
NTRK3 neurotrophic tyrosine kinase, receptor, type 3 4916 Q16288 IP/WB
Yamashita N , et al. 2016
MET met proto-oncogene 17295 P16056 IP; LC-MS/MS
Xie Z , et al. 2016
Pbx1 pre B cell leukemia homeobox 1 18514 P41778 ChIP seq; Expression microarray
Golonzhka O , et al. 2015

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