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Relevance to Autism

A rare deletion of the PLCB1 gene was found in an individual with ASD (Christian et al., 2008). Biallelic loss-of-function variants in this gene have also been identified in individuals with early-onset epileptic encephalopathy (Kurian et al., 2010; Poduri et al., 2012; Ngoh et al., 2014).

Molecular Function

The protein encoded by this gene catalyzes the formation of inositol 1,4,5-trisphosphate and diacylglycerol from phosphatidylinositol 4,5-bisphosphate. This reaction uses calcium as a cofactor and plays an important role in the intracellular transduction of many extracellular signals. This gene is activated by two G-protein alpha subunits, alpha-q and alpha-11. Two transcript variants encoding different isoforms have been found for this gene.

External Links

        

References

Type
Title
Type of Disorder
Associated Disorders
Author, Year
Primary
Novel submicroscopic chromosomal abnormalities detected in autism spectrum disorder.
ASD
Support
Refinement and discovery of new hotspots of copy-number variation associated with autism spectrum disorder.
ASD
Support
A discovery resource of rare copy number variations in individuals with autism spectrum disorder.
ASD
Support
Homozygous PLCB1 deletion associated with malignant migrating partial seizures in infancy.
Epilepsy
Support
Phospholipase C beta 1 deficiency is associated with early-onset epileptic encephalopathy.
Epilepsy
Support
Integrating de novo and inherited variants in 42
ASD
Support
Genes that Affect Brain Structure and Function Identified by Rare Variant Analyses of Mendelian Neurologic Disease.
ID, epilepsy/seizures
Support
Severe infantile epileptic encephalopathy due to mutations in PLCB1: expansion of the genotypic and phenotypic disease spectrum.
Epilepsy
DD

Rare

Variant ID
Variant Type
Allele Change
Residue Change
Inheritance Pattern
Inheritance Association
Family Type
Author, Year
 GEN316R001 
 copy_number_loss 
  
  
 Familial 
  
  
 GEN316R002 
 copy_number_loss 
  
  
 Unknown 
  
 Unknown 
 GEN316R003 
 copy_number_loss 
  
  
 Unknown 
  
 Unknown 
 GEN316R004 
 copy_number_gain 
  
  
 Familial 
 Paternal 
 Simplex 
 GEN316R005 
 copy_number_gain 
  
  
 Familial 
 Maternal 
 Simplex 
 GEN316R006 
 copy_number_loss 
  
  
 Familial 
 Maternal 
 Simplex 
 GEN316R007 
 copy_number_loss 
  
  
 Familial 
 Maternal 
 Simplex 
 GEN316R008 
 copy_number_gain 
  
  
 Familial 
 Paternal 
 Multiplex 
 GEN316R009 
 copy_number_gain 
  
  
 Familial 
 Maternal 
 Multiplex 
 GEN316R010a 
 copy_number_loss 
  
  
 Familial 
 Both parents 
 Simplex 
 GEN316R011a 
 copy_number_loss 
  
  
 Familial 
 Both parents 
 Simplex 
 GEN316R012a 
 copy_number_loss 
  
  
 Familial 
 Maternal 
 Simplex 
 GEN316R012b 
 splice_site_variant 
 c.99+1G>A 
  
 Familial 
 Paternal 
 Simplex 
 GEN316R013a 
 missense_variant 
 c.2179T>A 
 p.Trp727Arg 
 Familial 
 Both parents 
 Multiplex 
 GEN316R014 
 missense_variant 
 c.1015C>A 
 p.Gln339Lys 
 De novo 
  
  
 GEN316R015 
 frameshift_variant 
 c.2207dup 
 p.Val737GlyfsTer15 
 De novo 
  
 Simplex 
 GEN316R016 
 missense_variant 
 c.3423+11864C>A 
  
 De novo 
  
 Simplex 
 GEN316R017 
 missense_variant 
 c.2279G>A 
 p.Arg760His 
 De novo 
  
 Simplex 

Common

No Common Variants Available
Chromosome
CNV Locus
CNV Type
# of studies
Animal Model
20
Deletion-Duplication
 22
 
20
Duplication
 4
 
20
Duplication
 1
 
20
Duplication
 1
 
20
Duplication
 1
 
20
Duplication
 3
 

No Animal Model Data Available

No PIN Data Available
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