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Relevance to Autism

Three de novo variants (two missense variants and a synonymous variant predicted in PMID 26938441 to affect splicing regulation by altering an exonic splicing regulator) have been identified in the NUP133 gene in ASD probands from the Simons Simplex Collection (O'Roak et al., 2012; Iossifov et al., 2012; Iossifov et al., 2014). Evaluation of the statistical significance of observing multiple functional de novo variants in this gene, taking into account gene length and local sequence context to determine the expected number of variants, generated a p-value of 3.01E-03 (Takata et al., 2016).

Molecular Function

The protein encoded by this gene is a structural constituent of the nuclear pore and is involved in poly(A)+ RNA transport.

External Links

        

References

Type
Title
Type of Disorder
Associated Disorders
Author, Year
Primary
De novo gene disruptions in children on the autistic spectrum.
ASD
Support
Integrating de novo and inherited variants in 42
ASD
Support
The contribution of de novo coding mutations to autism spectrum disorder
ASD
Support
Sporadic autism exomes reveal a highly interconnected protein network of de novo mutations.
ASD
Recent Recommendation
De Novo Synonymous Mutations in Regulatory Elements Contribute to the Genetic Etiology of Autism and Schizophrenia.

Rare

Variant ID
Variant Type
Allele Change
Residue Change
Inheritance Pattern
Inheritance Association
Family Type
Author, Year
 GEN812R001 
 missense_variant 
 c.386C>T 
 p.Ala129Val 
 De novo 
  
 Simplex 
 GEN812R002 
 missense_variant 
 c.2146A>G 
 p.Met716Val 
 De novo 
  
 Simplex 
 GEN812R003 
 synonymous_variant 
 c.2694A>G 
 p.Ser898= 
 De novo 
  
 Simplex 
 GEN812R004 
 synonymous_variant 
 c.78C>G 
 p.Gly26%3D 
 De novo 
  
  

Common

No Common Variants Available
Chromosome
CNV Locus
CNV Type
# of studies
Animal Model
1
Duplication
 44
 
1
Duplication
 1
 
1
Deletion
 2
 
1
Duplication
 1
 
1
Duplication
 2
 
1
Duplication
 1
 
1
Deletion
 7
 
1
Deletion
 2
 

No Animal Model Data Available

 

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