NPTN
Homo sapiens
Gene Name: neuroplastin
Aliases: GP55, GP65, SDFR1, SDR1, np55, np65
Chromosome No: 15
Chromosome Band: 15q24.1
Genetic Category: Rare single gene variant-Rare single gene variant/Functional
Aliases: GP55, GP65, SDFR1, SDR1, np55, np65
Chromosome No: 15
Chromosome Band: 15q24.1
Genetic Category: Rare single gene variant-Rare single gene variant/Functional
Summary Statistics:
ASD Reports: 3
Recent Reports: 0
Annotated variants: 3
Associated CNVs: 9
Evidence score: 2
ASD Reports: 3
Recent Reports: 0
Annotated variants: 3
Associated CNVs: 9
Evidence score: 2
Associated Disorders: |
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Relevance to Autism
Li et al., 2023 determined that a de novo coding-synonymous variant in the NPTN gene originally identified in an ASD proband from the Autism Sequencing Consortium in Satterstrom et al., 2020 was a non-canonical splicing variant; subsequent functional analysis by minigene splicing assays demonstrated that this variant resulted in loss of 180 base pairs from exon 6 of this gene. De novo missense variants have also been identified in two ASD probands from the SPARK cohort (Trost et al., 2022).
Molecular Function
This gene encodes a type I transmembrane protein belonging to the Ig superfamily. The protein is believed to be involved in cell-cell interactions or cell-substrate interactions.
References
Type
Title
Type of Disorder
Associated Disorders
Author, Year
Support
Large-Scale Exome Sequencing Study Implicates Both Developmental and Functional Changes in the Neurobiology of Autism
ASD
Support
Genomic architecture of autism from comprehensive whole-genome sequence annotation
ASD