Summary Statistics:
ASD Reports: 15
Recent Reports: 1
Annotated variants: 43
Associated CNVs: 6
Evidence score: 4
Gene Score: S
Relevance to Autism
Heterozygous mutations in the MEIS2 gene, frequently in the form of 15q14 microdeletions, are responsible for cleft palate, cardiac defects, and mental retardation (CPCMR; OMIM 600987). A de novo in-frame deletion variant in the MEIS2 gene was identified in a female patient diagnosed with ASD in Louw et al., 2015. A de novo 15q14 microdeletion involving MEIS2 was observed in a patient presenting with autistic behavior in Shimojima et al., 2017. Douglas et al., 2018 reported four individuals with de novo predicted damaging missense variants in the MEIS2 gene; in addition to features resembling those observed in patients with 15q14 deletions, three of the individuals in Douglas et al., 2018 presented with autism or ASD.
Molecular Function
This gene encodes a homeobox protein belonging to the TALE ('three amino acid loop extension') family of homeodomain-containing proteins. TALE homeobox proteins are highly conserved transcription regulators, and several members have been shown to be essential contributors to developmental programs.
References
Primary
MEIS2 involvement in cardiac development, cleft palate, and intellectual disability.
Cleft palate, cardiac defects, and mental retardat
ASD
Support
Exome sequencing of 457 autism families recruited online provides evidence for autism risk genes
ASD
Support
Exome sequencing improves the molecular diagnostics of paediatric unexplained neurodevelopmental disorders
DD
Support
Whole genome paired-end sequencing elucidates functional and phenotypic consequences of balanced chromosomal rearrangement in patients with develop...
ID, epilepsy/seizures
Microcephaly
Support
Integrating de novo and inherited variants in 42
ASD
Support
Heterozygous loss-of-function variants of MEIS2 cause a triad of palatal defects, congenital heart defects, and intellectual disability.
Cleft palate, cardiac defects, and mental retardat
ASD
Support
Genetic investigation of syndromic forms of obesity
DD, ID
Support
A 15q14 microdeletion involving MEIS2 identified in a patient with autism spectrum disorder.
Cleft palate, cardiac defects, and mental retardat
Autistic behavior
Support
Genome sequencing broadens the range of contributing variants with clinical implications in schizophrenia
SCZ
ID
Support
Whole genome sequencing resource identifies 18 new candidate genes for autism spectrum disorder
ASD
Support
Large-scale targeted sequencing identifies risk genes for neurodevelopmental disorders
ASD
Support
Rare Variant Burden and Behavioral Phenotypes in Children with Autism in Slovakia
ASD
Support
Severe childhood speech disorder: Gene discovery highlights transcriptional dysregulation
Childhood apraxia of speech
ASD, DD
Support
The impact of inversions across 33,924 families with rare disease from a national genome sequencing project
DD
Recent Recommendation
De novo missense variants in MEIS2 recapitulate the microdeletion phenotype of cardiac and palate abnormalities, developmental delay, intellectual ...
Cleft palate, cardiac defects, and mental retardat
ASD
GEN1028R001
inframe_deletion
c.324_326del
p.Ala109del
De novo
GEN1028R002
missense_variant
c.956C>T
p.Thr319Ile
De novo
Multiplex
GEN1028R003
copy_number_loss
De novo
GEN1028R004
missense_variant
c.905C>T
p.Pro302Leu
De novo
GEN1028R005
missense_variant
c.992G>A
p.Arg331Lys
De novo
GEN1028R006
missense_variant
c.1004T>C
p.Val335Ala
De novo
GEN1028R007
missense_variant
c.965A>T
p.Gln322Leu
De novo
GEN1028R008
stop_gained
c.978G>A
p.Trp326Ter
De novo
GEN1028R009
splice_site_variant
c.639+1G>A
De novo
GEN1028R010
splice_site_variant
c.640-2A>G
De novo
GEN1028R011
stop_gained
c.829C>T
p.Gln277Ter
De novo
GEN1028R012
frameshift_variant
c.868dup
p.Ile290AsnfsTer40
De novo
GEN1028R013
splice_site_variant
c.978-2A>G
De novo
GEN1028R014
frameshift_variant
c.383del
p.Lys128SerfsTer19
De novo
GEN1028R015
frameshift_variant
c.934_937del
p.Leu312ArgfsTer11
De novo
GEN1028R016
missense_variant
c.998G>A
p.Arg333Lys
De novo
GEN1028R017
copy_number_loss
De novo
GEN1028R018
copy_number_loss
De novo
GEN1028R019
copy_number_loss
De novo
GEN1028R020
copy_number_loss
Unknown
GEN1028R021
copy_number_loss
De novo
GEN1028R022
copy_number_loss
Unknown
GEN1028R023
copy_number_loss
Unknown
GEN1028R024
copy_number_loss
De novo
GEN1028R025
copy_number_loss
De novo
GEN1028R026
copy_number_loss
De novo
GEN1028R027
copy_number_loss
De novo
GEN1028R028
copy_number_loss
De novo
GEN1028R029
copy_number_loss
De novo
GEN1028R030
copy_number_loss
Unknown
Not maternal
GEN1028R031
translocation
De novo
GEN1028R032
stop_gained
c.520C>T
p.Arg174Ter
De novo
GEN1028R033
stop_gained
c.520C>T
p.Arg174Ter
De novo
GEN1028R034
splice_site_variant
c.5-2A>G
Familial
Paternal
GEN1028R035
stop_gained
c.1099C>T
p.Gln367Ter
Unknown
Simplex
GEN1028R036
frameshift_variant
c.934_937del
p.Leu312ArgfsTer11
Unknown
Unknown
GEN1028R037
copy_number_loss
De novo
Simplex
GEN1028R038
synonymous_variant
c.1323C>T
p.His441=
De novo
GEN1028R039
missense_variant
c.973A>C
p.Asn325His
De novo
Simplex
GEN1028R040
stop_gained
c.1021C>T
p.Gln341Ter
De novo
GEN1028R041a
inversion
Unknown
GEN1028R041b
copy_number_loss
Unknown
GEN1028R042
missense_variant
c.790A>G
p.Thr264Ala
Unknown
No Common Variants Available
15
Deletion-Duplication
2
15
Deletion-Duplication
24
No Animal Model Data Available
No Interactions Available