Summary Statistics:
ASD Reports: 14
Recent Reports: 1
Annotated variants: 36
Associated CNVs: 14
Evidence score: 3
Gene Score: 4S
Relevance to Autism
A de novo missense variant in the KIF5C gene that was predicted to be damaging was identified in an autistic proband (Awadalla et al., 2010). Inherited missense variants in this gene that were predicted to be damaging were identified in Chinese ASD probands in Li et al., 2017. Phenotypic characterization of four previously published cases (from de Ligt et al., 2013, Poirier et al., 2013, Januar et al., 2014, and Cavallin et al., 2016) and two novel cases in Michels et al., 2017 implicated KIF5C missense variants as the cause of a neurodevelopmental disorder characterized by infantile-onset epilepsy, absent speech, malformations of cortical development, and, in three cases, stereotypic hand movements.
Molecular Function
Neuron-specific kinesin heavy chain (kinesin is a microtubule-associated force-producing protein that may play a role in organelle transport)
References
Primary
Direct measure of the de novo mutation rate in autism and schizophrenia cohorts.
ASD
Support
Large-scale targeted sequencing identifies risk genes for neurodevelopmental disorders
ASD, DD
Support
Exome sequencing of 457 autism families recruited online provides evidence for autism risk genes
ASD
Support
ASD, epilepsy/seizures
Support
Targeted sequencing and functional analysis reveal brain-size-related genes and their networks in autism spectrum disorders.
ASD
Support
Recurrent KIF5C mutation leading to frontal pachygyria without microcephaly.
DD
Absent speech, stereotypic hand movements, pachygy
Support
Integrating de novo and inherited variants in 42
ASD
Support
Somatic mutations in cerebral cortical malformations.
DD, epilepsy/seizures
Pachygyria
Support
KIF5C deficiency causes abnormal cortical neuronal migration, dendritic branching, and spine morphology in mice
Complex cortical dysplasia with other brain malfor
Support
Mutations in TUBG1, DYNC1H1, KIF5C and KIF2A cause malformations of cortical development and microcephaly.
Cortical malformations, microcephaly
Epilepsy/seizures
Support
De novo variants in neurodevelopmental disorders-experiences from a tertiary care center
DD
Support
Diagnostic exome sequencing in persons with severe intellectual disability.
ID
Epilepsy, ASD
Recent Recommendation
Mutations of KIF5C cause a neurodevelopmental disorder of infantile-onset epilepsy, absent language, and distinctive malformations of cortical deve...
Epilepsy/seizures, DD
Absent speech, stereotypic hand movements
GEN389R001
missense_variant
C>T
R802C, R872C
De novo
GEN389R002
missense_variant
c.420G>A
p.Arg141Gln
De novo
GEN389R003
missense_variant
c.2439G>T
p.Gly814Val
Unknown
GEN389R004
missense_variant
c.1344A>G
p.Glu449Gly
Familial
Simplex
GEN389R005
missense_variant
c.1783C>T
p.Asp595=
Familial
Simplex
GEN389R006
missense_variant
c.2385C>T
p.Ala796Val
Familial
Simplex
GEN389R007
missense_variant
c.2541G>A
p.Arg848Lys
Familial
Simplex
GEN389R008
missense_variant
c.710A>T
p.Glu237Val
De novo (germline mosaicism)
Multiplex
GEN389R009
missense_variant
c.420G>A
p.Arg141Gln
De novo
GEN389R010
missense_variant
c.513G>T
p.Cys172Phe
Unknown
GEN389R011
missense_variant
c.420G>A
p.Arg141Gln
De novo
GEN389R012
missense_variant
c.420G>A
p.Arg141Gln
De novo
GEN389R013
missense_variant
c.1918G>A
p.Ser640=
De novo
GEN389R014
stop_gained
c.1824C>T
p.Leu608%3D
Familial
Paternal
GEN389R015
splice_site_variant
c.217+1G>A
Unknown
GEN389R016
stop_lost
c.768T>C
p.Asn256%3D
Unknown
GEN389R017
stop_lost
c.768T>C
p.Asn256%3D
Unknown
GEN389R018
missense_variant
c.1810C>T
p.Arg604Cys
Unknown
GEN389R019
missense_variant
c.200C>T
p.Ala67Val
Unknown
GEN389R020
stop_gained
c.2463C>T
p.Asn821%3D
Unknown
GEN389R021
stop_gained
c.1200C>T
p.Asp400%3D
Unknown
GEN389R022
stop_gained
c.2331G>T
p.Arg777Ser
Unknown
GEN389R023
stop_lost
c.1431T>C
p.Asn477%3D
Unknown
GEN389R024
stop_lost
c.510T>C
p.Thr170%3D
Unknown
GEN389R025
stop_lost
c.1361A>T
p.Glu454Val
Unknown
GEN389R026
missense_variant
c.1351G>C
p.Asp451His
Unknown
GEN389R027
missense_variant
c.2830G>T
p.Gly944Trp
Unknown
GEN389R028
missense_variant
c.571C>T
p.Arg191Ter
Unknown
GEN389R029
missense_variant
c.802G>A
p.Ala268Thr
Unknown
GEN389R030
missense_variant
c.420G>A
p.Leu140%3D
De novo
Unknown
GEN389R031
missense_variant
c.323T>A
p.Ile108Asn
De novo
Multiplex
GEN389R032
missense_variant
c.160C>T
p.Pro54Ser
De novo
Multiplex
GEN389R033
missense_variant
c.857G>A
p.Arg286Gln
De novo
GEN389R034
missense_variant
c.1996G>A
p.Glu666Lys
De novo
Simplex
GEN389R035
complex_structural_alteration
Unknown
Simplex
GEN389R036
missense_variant
c.542T>G
p.Met181Arg
Unknown
Simplex
No Common Variants Available
2
Deletion-Duplication
26
No Animal Model Data Available
Summary Statistics:
Total Interactions: 12
Total Publications: 4
Show all nodes
Hide non-ASD
Interactor Symbol
Interactor Name
Interactor Organism
Entrez ID
Uniprot ID
Interaction Type
Evidence
Reference
tubulin beta chain
P02554
CET; in vitro binding assay
Morikawa M , et al. 2015
AZIN1
antizyme inhibitor 1
51582
O14977
IP; LC-MS/MS
Huttlin EL , et al. 2015
C19ORF46
Nesprin-4
163183
Q8N205-2
IP; LC-MS/MS
Huttlin EL , et al. 2015
COG6
component of oligomeric golgi complex 6
57511
Q9Y2V7
IP; LC-MS/MS
Huttlin EL , et al. 2015
EXOC1
exocyst complex component 1
55763
Q9NV70
IP; LC-MS/MS
Huttlin EL , et al. 2015
FAT1
FAT tumor suppressor homolog 1 (Drosophila)
14107
F2Z4A3
IP; LC-MS/MS
Badouel C , et al. 2015
KLC1
kinesin light chain 1
3831
Q07866
IP; LC-MS/MS
Huttlin EL , et al. 2015
LOC100158003
tubulin alpha-1D chain-like
100158003
P02550
CET; in vitro binding assay
Morikawa M , et al. 2015
TRAK2
trafficking protein, kinesin binding 2
66008
O60296
IP; LC-MS/MS
Huttlin EL , et al. 2015
TRIP6
thyroid hormone receptor interactor 6
7205
Q15654
IP; LC-MS/MS
Huttlin EL , et al. 2015
DISC1
disrupted in schizophrenia 1
307940
Q810H6
GST
Taya S , et al. 2007