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Relevance to Autism

De novo variants in the KCNH1 gene, including a de novo loss-of-function variant and several de novo missense variants, have been identified in ASD probands from multiple cohorts, including the Simons Simplex Collection, the SPARK cohort, the Autism Sequencing Consortium, and a Chinese ASD cohort (Zhou et al., 2022; Fu et al., 2022; Trost et al., 2022; Wu et al., 2024). A missense variant in this gene was recently reported in a male patient from Pakistan presenting with pharmacoresistant seizures and autistic behavior (Chand et al., 2023).

Molecular Function

Voltage-gated potassium (Kv) channels represent the most complex class of voltage-gated ion channels from both functional and structural standpoints. Their diverse functions include regulating neurotransmitter release, heart rate, insulin secretion, neuronal excitability, epithelial electrolyte transport, smooth muscle contraction, and cell volume. This gene encodes a member of the potassium channel, voltage-gated, subfamily H. This member is a pore-forming (alpha) subunit of a voltage-gated non-inactivating delayed rectifier potassium channel. It is activated at the onset of myoblast differentiation. The gene is highly expressed in brain and in myoblasts. Overexpression of the gene may confer a growth advantage to cancer cells and favor tumor cell proliferation. Heterozygous mutations in this gene are responsible for both Temple-Baraitser syndrome (OMIM 611816) and Zimmermann-Laband syndrome 1 (OMIM 135500).

External Links

        

References

Type
Title
Type of Disorder
Associated Disorders
Author, Year
Primary
Phenotypic and genetic analysis of children with unexplained neurodevelopmental delay and neurodevelopmental comorbidities in a Chinese cohort using trio-based whole-exome sequencing
ASD
Support
Integrating de novo and inherited variants in 42
ASD
Support
Next-generation phenotyping integrated in a national framework for patients with ultrarare disorders improves genetic diagnostics and yields new molecular findings
DD
Support
Potassium Voltage-Gated Channel Subfamily H Member 1 (KCNH1) Missense Mutation Causing Epileptic Encephalopathy And Autistic Behaviour
Epilepsy/seizures
Autistic features
Support
Genomic architecture of autism from comprehensive whole-genome sequence annotation
ASD
Support
Rare coding variation provides insight into the genetic architecture and phenotypic context of autism
ASD

Rare

Variant ID
Variant Type
Allele Change
Residue Change
Inheritance Pattern
Inheritance Association
Family Type
Author, Year
 GEN1452R001 
 missense_variant 
 c.1070G>A 
 p.Arg357Gln 
 De novo 
  
 Simplex 
 GEN1452R002 
 splice_region_variant 
 c.2113-7_2113-4dup 
  
 De novo 
  
 Simplex 
 GEN1452R003 
 synonymous_variant 
 c.1053C>T 
 p.Ser351= 
 De novo 
  
  
 GEN1452R004 
 missense_variant 
 c.1486G>A 
 p.Gly496Arg 
 De novo 
  
 Simplex 
 GEN1452R005 
 missense_variant 
 c.1537C>T 
 p.His513Tyr 
 De novo 
  
 Simplex 
 GEN1452R006 
 stop_gained 
 c.1087C>T 
 p.Arg363Ter 
 De novo 
  
  
 GEN1452R007 
 missense_variant 
 c.1069C>T 
 p.Arg357Trp 
 Unknown 
  
 Extended multiplex 
 GEN1452R008 
 missense_variant 
 c.457C>T 
 p.Arg153Trp 
 De novo 
  
  

Common

No Common Variants Available
Chromosome
CNV Locus
CNV Type
# of studies
Animal Model
1
Duplication
 50
 
1
Duplication
 1
 
1
Deletion-Duplication
 10
 
1
Duplication
 1
 

No Animal Model Data Available

 

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