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Relevance to Autism

De novo variants in the ITGA8 gene have been identified in ASD probands, including two de novo missense variants in probands from the Simons Simplex Collection and the Autism Sequencing Consortium (Iossifov et al., 2014; Yuen et al., 2017; Turner et al., 2017; Satterstrom et al., 2020). Functional assessment of the ASD-associated p.Arg748Cys missense variant, which was originally identified in a proband from the Simons Simplex Collection, in Drosophila using an overexpression-based strategy in Macrogliese et al., 2022 demonstrated that flies overexpressing ITGA8-p.Arg748Gly failed to reduce the expected viability to the extent of the corresponding reference allele upon overexpression, indicating a loss-of-function effect.

Molecular Function

Integrins are heterodimeric transmembrane receptor proteins that mediate numerous cellular processes including cell adhesion, cytoskeletal rearrangement, and activation of cell signaling pathways. Integrins are composed of alpha and beta subunits. This gene encodes the alpha 8 subunit of the heterodimeric integrin alpha8beta1 protein. The encoded protein is a single-pass type 1 membrane protein that contains multiple FG-GAP repeats. This repeat is predicted to fold into a beta propeller structure. This gene regulates the recruitment of mesenchymal cells into epithelial structures, mediates cell-cell interactions, and regulates neurite outgrowth of sensory and motor neurons. The integrin alpha8beta1 protein thus plays an important role in wound-healing and organogenesis. Mutations in this gene have been associated with renal hypodysplasia/aplasia-1 (RHDA1) and with several animal models of chronic kidney disease.

External Links

        

References

Type
Title
Type of Disorder
Associated Disorders
Author, Year
Primary
The contribution of de novo coding mutations to autism spectrum disorder
ASD
Support
Genomic Patterns of De Novo Mutation in Simplex Autism
ASD
Support
Whole genome sequencing resource identifies 18 new candidate genes for autism spectrum disorder
ASD
Support
Integrating de novo and inherited variants in 42
ASD
Support
Large-Scale Exome Sequencing Study Implicates Both Developmental and Functional Changes in the Neurobiology of Autism
ASD
Recent Recommendation
Drosophila functional screening of de novo variants in autism uncovers damaging variants and facilitates discovery of rare neurodevelopmental diseases
ASD

Rare

Variant ID
Variant Type
Allele Change
Residue Change
Inheritance Pattern
Inheritance Association
Family Type
Author, Year
 GEN1325R001 
 missense_variant 
 c.2242C>T 
 p.Arg748Cys 
 De novo 
  
 Simplex 
 GEN1325R002 
 intron_variant 
 c.343+5778A>G 
  
 De novo 
  
 Simplex 
 GEN1325R003 
 intron_variant 
 c.569-911C>G 
  
 De novo 
  
 Multiplex 
 GEN1325R004 
 intron_variant 
 c.802+11T>C 
  
 De novo 
  
 Simplex 
 GEN1325R005 
 intron_variant 
 c.1354+10346A>C 
  
 De novo 
  
 Simplex 
 GEN1325R006 
 intron_variant 
 c.2212-1110G>C 
  
 De novo 
  
 Simplex 
 GEN1325R007 
 intron_variant 
 c.1354+1185A>G 
  
 De novo 
  
 Simplex 
 GEN1325R008 
 intron_variant 
 c.802+5670T>A 
  
 De novo 
  
 Multiplex 
 GEN1325R009 
 intron_variant 
 c.344-3251G>C 
  
 De novo 
  
 Simplex 
 GEN1325R010 
 intron_variant 
 c.2835+3464G>A 
  
 De novo 
  
 Simplex 
 GEN1325R011 
 intron_variant 
 c.1354+11140_1354+11179del 
  
 De novo 
  
 Simplex 
 GEN1325R012 
 intron_variant 
 c.1400-7670C>T 
  
 De novo 
  
 Simplex 
 GEN1325R013 
 missense_variant 
 c.2671A>T 
 p.Ser891Cys 
 De novo 
  
  
 GEN1325R014 
 synonymous_variant 
 c.2919C>T 
 p.Ser973%3D 
 De novo 
  
  
 GEN1325R015 
 frameshift_variant 
 c.118_119insTTCA 
 p.Asn40IlefsTer74 
 Familial 
 Maternal 
 Multiplex 

Common

No Common Variants Available
Chromosome
CNV Locus
CNV Type
# of studies
Animal Model
10
Deletion-Duplication
 18
 
10
Deletion-Duplication
 14
 
10
Deletion-Duplication
 1
 
10
Deletion
 1
 
10
Deletion
 1
 
10
Duplication
 2
 
10
Duplication
 1
 
10
Duplication
 1
 
10
Duplication
 1
 
10
Deletion
 3
 
10
Deletion-Duplication
 3
 

No Animal Model Data Available

 

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