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Relevance to Autism

Deletions involving the GRID1 gene were found to be over-represented in ASD patients (n=14) compared to controls (n=3) (odds ratio of 5.412, P-value of 0.0031) in a whole-genome CNV study (Glessner et al., 2009). A paternally-inherited deletion involving the GRID1 gene was identified in an ASD case as part of a study using genome-wide SNP array for CNV detection by two distinct algorithms in a European ancestry case-control data set (Griswold et al., 2012). GRID1 expression was shown to be down-regulated in induced pluripotent stem cells and upregulated in neuronal precursors and mature neurons derived from fibroblasts from patients with MECP2 and CDKL5 mutations (Livide et al., 2015).

Molecular Function

This gene encodes a subunit of glutamate receptor channels. These channels mediate most of the fast excitatory synaptic transmission in the central nervous system and play key roles in synaptic plasticity.[

External Links

        

References

Type
Title
Type of Disorder
Associated Disorders
Author, Year
Primary
Autism genome-wide copy number variation reveals ubiquitin and neuronal genes.
ASD
Support
Integrating de novo and inherited variants in 42
ASD
Support
Mutations in Human Accelerated Regions Disrupt Cognition and Social Behavior.
ASD
Support
Large-scale discovery of novel genetic causes of developmental disorders.
Unknown diagnosis
Support
Evaluation of copy number variations reveals novel candidate genes in autism spectrum disorder-associated pathways.
ASD
Support
Exome sequencing of ion channel genes reveals complex profiles confounding personal risk assessment in epilepsy.
Epilepsy
Recent Recommendation
GluD1 is a common altered player in neuronal differentiation from both MECP2-mutated and CDKL5-mutated iPS cells.

Rare

Variant ID
Variant Type
Allele Change
Residue Change
Inheritance Pattern
Inheritance Association
Family Type
Author, Year
 GEN415R001 
 copy_number_loss 
  
  
 Familial 
 Paternal 
 Simplex 
 GEN415R002 
 missense_variant 
 c.1409T>A 
 p.Val470Asp 
 Unknown 
  
 Unknown 
 GEN415R003 
 missense_variant 
 c.2231C>T 
 p.Ala744Val 
 Unknown 
  
 Unknown 
 GEN415R004 
 missense_variant 
 c.1336G>C 
 p.Glu446Gln 
 De novo 
  
 Unknown 
 GEN415R005 
 intron_variant 
 c.727-93102_727-93101insG 
  
  
  
 Unknown 
 GEN415R006 
 missense_variant 
 c.1603C>T 
 p.Arg535Trp 
 De novo 
  
  

Common

Variant ID
Polymorphism
SNP ID
Allele Change
Residue Change
Population Origin
Population Stage
Author, Year
 GEN414C001 
 copy_number_loss 
  
  
  
 Discovery: Autism Case-Control cohort of 859 ASD cases and 1,409 healthy children of European ancestry; Replication: AGRE cohort of 1,336 ASD cases and 1,110 controls of European ancestry. 
 Combined (Discovery & Replication) 
Chromosome
CNV Locus
CNV Type
# of studies
Animal Model
10
Duplication
 1
 
10
Deletion-Duplication
 5
 
10
Deletion-Duplication
 25
 
10
Deletion
 2
 
10
Deletion
 10
 

Model Summary

Deletion of Grid1 leads to aberrant circuitry in prefrontal cortex and amygdala owing to its potential role in presynaptic differentiation and synapse formation.

References

Type
Title
Author, Year
Primary
Deletion of glutamate delta-1 receptor in mouse leads to aberrant emotional and social behaviors.

M_GRID1_1_KO_HM

Model Type: Genetic
Model Genotype: Homozygous
Mutation: Targeted deletion of exons 11 and 12 of GRID1.
Allele Type: Targeted (Knock Out)
Strain of Origin: Not specified
Genetic Background: 129/SvEv x C57BL/6
ES Cell Line: Not specified
Mutant ES Cell Line: Not specified
Model Source: Not specified

M_GRID1_1_KO_HM

Category
Entity
Quantity
Experimental Paradigm
Age at Testing
General locomotor activity1
Increased
Description: Increased spontaenous locomotor activity
Exp Paradigm: Male mice: open field test after chronic lithium (.7-1.0 mm) treatment
 Open field test
 Unreported
General locomotor activity1
Increased
Description: Increased spontaenous locomotor activity
Exp Paradigm: Male mice: open field test
 Open field test
 Unreported
Social interaction1
Abnormal
Description: Abnormal social interaction demonstrated by same time spent around stranger mouse and empty container
Exp Paradigm: Male mice: sociability test
 Three-chamber social approach test
 Unreported
Aggression1
Increased
Description: Increased aggression-like behavior indicated by higher frequency of attacks and shorter latency to attack
Exp Paradigm: Male mice: resident intruder test after chronic lithium (.7 to 1.0 microm) treatment
 Resident-intruder test
 Unreported
Aggression1
Increased
Description: Increased aggression-like behavior indicated by higher frequency of attacks and shorter latency to attack
Exp Paradigm: Male mice: resident intruder test
 Resident-intruder test
 Unreported
Anxiety1
Decreased
Description: Decreased anxiety behavior indicated by fewer marbles buried
Exp Paradigm: Male mice: marble-burying test
 Marble-burying test
 Unreported
Depression1
Increased
Description: Increased depression-like behavior indicated by greater duration of immobility
Exp Paradigm: Male mice: forced swim test
 Forced swim test
 Unreported
Anxiety1
Decreased
Description: Decreased anxiety behavior indicated by higher percent entires into open arms
Exp Paradigm: Male mice: elevated plus maze test
 Elevated plus maze test
 Unreported
Depression1
Increased
Description: Increased depression-like behavior indicated by lower preference for sucrose
Exp Paradigm: Male mice: sucrose preference test
 Sucrose preference test
 Unreported
Anxiety1
Decreased
Description: Decreased anxiety behavior indicated by greater time spent in central field
Exp Paradigm: Male mice: open field test
 Open field test
 Unreported
Depression1
Increased
Description: Increased depression-like behavior indicated by greater duration of immobility
Exp Paradigm: Male mice: forced swim test after chronic lithium (.7-1.0 mm) treatment
 Forced swim test
 Unreported
Protein expression level evidence1
Decreased
Description: Decreased expression of glua1, glua2 in prefrontal cortex
Exp Paradigm: Glud1 proteins expression
 Western blot
 7 weeks
Gene expression1
Decreased
Description: Decreased glud1 mrna expression in amygdala, prefrontal cortex, and hippocampus
Exp Paradigm: Glud1 mrna expression
 Quantitative pcr (qrt-pcr)
 P15
Protein expression level evidence1
Increased
Description: Increased expression of glua1, gluk2, and psd95 in amygdala
Exp Paradigm: Glud1 proteins expression
 Western blot
 7 weeks
Protein expression level evidence1
 No change
 Western blot
 7 weeks
Olfaction1
 No change
 Buried food test
 Unreported
Vision1
 No change
 Forepaw reaching test
 Unreported
Social interaction1
 No change
 Three-chamber social approach test
 Unreported
Social interaction1
 No change
 Three-chamber social approach test
 Unreported
 Not Reported: Circadian sleep/wake cycle, Communications, Developmental profile, Immune response, Learning & memory, Maternal behavior, Neuroanatomy / ultrastructure / cytoarchitecture, Neurophysiology, Physiological parameters, Repetitive behavior, Seizure

 

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