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Relevance to Autism

CNV analysis of 1,108 ASD cases, 2,458 schizophrenia (SCZ) cases, and 2,095 controls from a Japanese population in Kushima et al., 2018 demonstrated that significant enrichment of exonic CNVs affecting the GALNT8 gene was observed in a combined cohort of ASD and SCZ cases compared to controls [2 CNVs from ASD cases and 5 CNVs from SCZ cases (7 total) vs. 0 CNVs in controls (Odds ratio 9.05, P = 1.0E-05)].

Molecular Function

This gene encodes a member of the UDP-N-acetyl-alpha-D-galactosamine:polypeptide N-acetylgalactosaminyltransferase (GalNAc-T) family of enzymes. GalNAc-Ts initiate mucin-type O-linked glycosylation in the Golgi apparatus by catalyzing the transfer of GalNAc to serine and threonine residues on target proteins.

External Links

        

References

Type
Title
Type of Disorder
Associated Disorders
Author, Year
Primary
Comparative Analyses of Copy-Number Variation in Autism Spectrum Disorder and Schizophrenia Reveal Etiological Overlap and Biological Insights.
ASD, SCZ
Support
Inherited and De Novo Genetic Risk for Autism Impacts Shared Networks.
ASD

Rare

Variant ID
Variant Type
Allele Change
Residue Change
Inheritance Pattern
Inheritance Association
Family Type
Author, Year
 GEN1042R001 
 copy_number_loss 
  
  
 Unknown 
  
  
 GEN1042R002 
 copy_number_loss 
  
  
 Unknown 
  
  
 GEN1042R003 
 copy_number_loss 
  
  
 Unknown 
  
  
 GEN1042R004 
 copy_number_loss 
  
  
 Unknown 
  
  
 GEN1042R005 
 copy_number_loss 
  
  
 Unknown 
  
  
 GEN1042R006 
 copy_number_loss 
  
  
 Unknown 
  
  
 GEN1042R007 
 copy_number_loss 
  
  
 Unknown 
  
  
 GEN1042R008 
 frameshift_variant 
 c.74del 
 p.Leu25ArgfsTer25 
 Familial 
 Paternal 
 Multiplex 
 GEN1042R009 
 frameshift_variant 
 c.366dup 
 p.Gln123ThrfsTer12 
 Familial 
 Maternal 
 Multiplex 
 GEN1042R010 
 stop_gained 
 c.1186G>T 
 p.Gly396Ter 
 Familial 
 Paternal 
 Multiplex 

Common

No Common Variants Available
Chromosome
CNV Locus
CNV Type
# of studies
Animal Model
12
Deletion-Duplication
 12
 
12
Duplication
 1
 
12
Duplication
 5
 
12
Deletion
 1
 
12
Duplication
 2
 
12
Duplication
 1
 
12
Duplication
 3
 
12
Deletion
 9
 
12
Duplication
 1
 

No Animal Model Data Available

No PIN Data Available
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