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Relevance to Autism

Two de novo postzygotic nonsense variants in the FRG1 gene were identified in a cohort of 360 Spanish ASD probands in AlonsoGonzalez et al., 2021. Subsequent TADA analysis of post-zygotic mutations in the discovery cohort of Spanish ASD probands, as well as in a combined ASD cohort of 2171 trios, identified FRG1 as an ASD candidate gene with a false discovery rate (FDR) < 0.1.

Molecular Function

This gene maps to a location 100 kb centromeric of the repeat units on chromosome 4q35 which are deleted in facioscapulohumeral muscular dystrophy (FSHD). It is evolutionarily conserved and has related sequences on multiple human chromosomes but DNA sequence analysis did not reveal any homology to known genes. In vivo studies demonstrate the encoded protein is localized to the nucleolus.

External Links

        

References

Type
Title
Type of Disorder
Associated Disorders
Author, Year
Primary
Exploring the biological role of postzygotic and germinal de novo mutations in ASD
ASD
Support
Integrating de novo and inherited variants in 42
ASD

Rare

Variant ID
Variant Type
Allele Change
Residue Change
Inheritance Pattern
Inheritance Association
Family Type
Author, Year
 GEN1234R001 
 stop_gained 
 c.403A>T 
 p.Arg135Ter 
 De novo 
  
 Simplex 
 GEN1234R002 
 stop_gained 
 c.526G>T 
 p.Glu176Ter 
 De novo 
  
 Simplex 
 GEN1234R003 
 missense_variant 
 c.683G>A 
 p.Ser228Asn 
 De novo 
  
  

Common

No Common Variants Available
Chromosome
CNV Locus
CNV Type
# of studies
Animal Model
4
Duplication
 1
 
4
Duplication
 1
 
4
Duplication
 2
 
4
Deletion
 1
 
4
Duplication
 3
 
4
Deletion-Duplication
 1
 
4
Deletion-Duplication
 3
 
4
Duplication
 7
 
4
Deletion
 1
 
4
Deletion-Duplication
 1
 
4
Deletion-Duplication
 12
 
4
Deletion-Duplication
 48
 

No Animal Model Data Available

 

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