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Relevance to Autism

This gene was originally identified as an ASD candidate gene based on its enrichment in an autism-associated protein interaction module. Sequencing of post-mortem brain tissue from 25 ASD cases resulted in the identification of significant non-synonymous variants in this gene with an expected false-positive rate at 0.1, confirming the involvement of this module with autism; this finding was further validated by exome sequencing of an independent cohort of 505 ASD cases and 491 controls (Li et al., 2014).

Molecular Function

The product of this gene belongs to the SEC15 family. This protein is essential for vesicular traffic from the Golgi apparatus to the cell surface in yeast. It is one of the components of a multiprotein complex required for exocytosis.

External Links

        

References

Type
Title
Type of Disorder
Associated Disorders
Author, Year
Primary
Integrated systems analysis reveals a molecular network underlying autism spectrum disorders.
ASD
Support
Integrating de novo and inherited variants in 42
ASD
Support
Analysis of recent shared ancestry in a familial cohort identifies coding and noncoding autism spectrum disorder variants
ASD
ADHD, DD, ID

Rare

Variant ID
Variant Type
Allele Change
Residue Change
Inheritance Pattern
Inheritance Association
Family Type
Author, Year
 GEN681R001 
 missense_variant 
 c.392T>C 
 p.Ile131Thr 
 Unknown 
  
 Unknown 
 GEN681R002 
 missense_variant 
 c.1724A>G 
 p.Gln575Arg 
 Unknown 
  
 Unknown 
 GEN681R003a 
 intron_variant 
 c.937-397G>C 
  
 Familial 
 Both parents 
 Simplex 
 GEN681R004a 
 intron_variant 
 c.1295+1914G>A 
  
 Familial 
 Both parents 
 Simplex 
 GEN681R005a 
 intron_variant 
 c.937-397G>C 
  
 Familial 
 Both parents 
 Simplex 
 GEN681R006a 
 intron_variant 
 c.1295+1914G>A 
  
 Familial 
 Both parents 
 Simplex 
 GEN681R007 
 synonymous_variant 
 c.1779T>C 
 p.Ala593%3D 
 De novo 
  
  
 GEN681R008 
 stop_gained 
 c.2404C>T 
 p.Gln802Ter 
 De novo 
  
  

Common

No Common Variants Available
Chromosome
CNV Locus
CNV Type
# of studies
Animal Model
10
Duplication
 1
 
10
Duplication
 1
 
10
Duplication
 2
 
10
Deletion-Duplication
 15
 
10
Deletion
 1
 

No Animal Model Data Available


Interactor Symbol Interactor Name Interactor Organism Entrez ID Uniprot ID Interaction Type Evidence Reference
APLNR Apelin receptor 187 P35414 IP; LC-MS/MS
Huttlin EL , et al. 2015
C19ORF75 SIGLEC family-like protein 1 284369 Q8N7X8 IP; LC-MS/MS
Huttlin EL , et al. 2015
C9ORF89 Bcl10-interacting CARD protein 84270 Q96LW7-2 IP; LC-MS/MS
Huttlin EL , et al. 2015
CD70 CD70 molecule 970 P32970 IP; LC-MS/MS
Huttlin EL , et al. 2015
CHD8 chromodomain helicase DNA binding protein 8 57680 Q9HCK8 CHIP-seq
Cotney J , et al. 2015
DSN1 DSN1, MIND kinetochore complex component, homolog (S. cerevisiae) 79980 Q9H410 IP; LC-MS/MS
Huttlin EL , et al. 2015
DTNBP1 dystrobrevin binding protein 1 84062 Q96EV8 IP; LC-MS/MS
Huttlin EL , et al. 2015
EXOC1 exocyst complex component 1 55763 Q9NV70 IP; LC-MS/MS
Huttlin EL , et al. 2015
EXOC2 exocyst complex component 2 55770 B2RBE6 IP; LC-MS/MS
Huttlin EL , et al. 2015
EXOC3 exocyst complex component 3 11336 O60645 IP; LC-MS/MS
Huttlin EL , et al. 2015
EXOC4 exocyst complex component 4 60412 E9PED2 IP; LC-MS/MS
Huttlin EL , et al. 2015
EXOC5 exocyst complex component 5 10640 O00471 IP; LC-MS/MS
Huttlin EL , et al. 2015
EXOC7 exocyst complex component 7 23265 Q9UPT5 IP; LC-MS/MS
Huttlin EL , et al. 2015
EXOC8 exocyst complex component 8 149371 Q8IYI6 IP; LC-MS/MS
Huttlin EL , et al. 2015
GNAQ guanine nucleotide binding protein (G protein), q polypeptide 2776 P50148 IP; LC-MS/MS
Huttlin EL , et al. 2015
NPY2R Neuropeptide Y receptor type 2 4887 P49146 IP; LC-MS/MS
Huttlin EL , et al. 2015
RAP1A RAP1A, member of RAS oncogene family 5906 P62834 IP; LC-MS/MS
Huttlin EL , et al. 2015
STX11 syntaxin 11 8676 O75558 IP; LC-MS/MS
Huttlin EL , et al. 2015
VPS53 vacuolar protein sorting 53 homolog (S. cerevisiae) 55275 B3KS06 IP; LC-MS/MS
Huttlin EL , et al. 2015

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