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Relevance to Autism

A rare and potentially damaging de novo missense variant in the EIF4G1 gene was identified in an ASD proband from the Simons Simplex Collection in Iossifov et al., 2014. Gonatopoulos-Pournatzis et al., 2020 demonstrated that microexon splicing in eIF4G translation initiation factors, a process involved in regulation of the neuronal proteome and higher order cognitive functions, was disrupted in post-mortem brain tissue from autistic patients; furthermore, mice that were deficient for the Eif4g1 microexon (Eif4g1MIC/MIC) displayed learning and memory deficits, altered synaptic plasticity, and autistic-like social behavior.

Molecular Function

The protein encoded by this gene is a component of the multi-subunit protein complex EIF4F. This complex facilitates the recruitment of mRNA to the ribosome, which is a rate-limiting step during the initiation phase of protein synthesis. The recognition of the mRNA cap and the ATP-dependent unwinding of 5'-terminal secondary structure is catalyzed by factors in this complex. The subunit encoded by this gene is a large scaffolding protein that contains binding sites for other members of the EIF4F complex. A domain at its N-terminus can also interact with the poly(A)-binding protein, which may mediate the circularization of mRNA during translation.

External Links

        

References

Type
Title
Type of Disorder
Associated Disorders
Author, Year
Primary
Autism-Misregulated eIF4G Microexons Control Synaptic Translation and Higher Order Cognitive Functions.
ASD
Support
Mutational Landscape of Autism Spectrum Disorder Brain Tissue
ASD
Support
The contribution of de novo coding mutations to autism spectrum disorder
ASD
Support
Integrating de novo and inherited variants in 42
ASD

Rare

Variant ID
Variant Type
Allele Change
Residue Change
Inheritance Pattern
Inheritance Association
Family Type
Author, Year
 GEN1171R001 
 missense_variant 
 c.2785A>C 
 p.Lys929Gln 
 De novo 
  
 Simplex 
 GEN1171R002a 
 synonymous_variant 
 c.675A>G 
 p.Gln225%3D 
 Unknown 
  
  
 GEN1171R002b 
 synonymous_variant 
 c.4539G>C 
 p.Ala1513%3D 
 Unknown 
  
  
 GEN1171R003 
 missense_variant 
 c.448G>T 
 p.Gly150Cys 
 De novo 
  
  
 GEN1171R004 
 synonymous_variant 
 c.1320G>A 
 p.Ala440%3D 
 De novo 
  
  

Common

No Common Variants Available
Chromosome
CNV Locus
CNV Type
# of studies
Animal Model
3
Duplication
 1
 
3
Duplication
 3
 
3
Duplication
 1
 
3
Duplication
 3
 
3
Duplication
 1
 
3
Duplication
 2
 
3
Deletion
 1
 
3
Deletion
 2
 
3
Deletion
 8
 

Model Summary

EIF4G1 microexon-deficient mice display deficits in social approach and social memory in the three-chambered assay, decreased social interaction in the reciprocal interaction test, impaired episodic memory measured by the fear conditioning test, and altered hippocampal synaptic plasticity as measured by LTP. Eif4g1^-/- mice have normal weight, motor coordination, locomotion, habituation, anxiety, aggression, hearing, response to light stimuli, cued fear conditioning. Eif4g1^-/- are born at Mendelian ratios and show no change in gross morphology. Eif4g1^-/- mice have increased expression of critical synaptic proteins, including GluN1.

References

Type
Title
Author, Year
Primary
Autism-Misregulated eIF4G Microexons Control Synaptic Translation and Higher Order Cognitive Functions.

M_EIF4G1_1_KO_HM

Model Type: Genetic
Model Genotype: Homozygous
Mutation: CRISPR-Cas9 editing was used to generate mice with deletion of eIF4G1 microexon overlapping prion-like domains (delMIC), GGFRSLQ, proximal to the N-terminus of eIF4G1. Heterozygous Eif4g1^+/delMIC animals were crossed to generate mice homozygously deleted for microexons (Eif4g1^delMIC/delMIC). PCR and Sanger sequencing confirmed successful deletions.
Allele Type: Knockout
Strain of Origin: C57BL/6J
Genetic Background: C57BL/6J
ES Cell Line: Not specified
Mutant ES Cell Line: Not specified
Model Source: PMID 31999954

M_EIF4G1_2_KO_HT

Model Type: Genetic
Model Genotype: Heterozygous
Mutation: CRISPR-Cas9 editing was used to generate mice with deletion of eIF4G1 microexon overlapping prion-like domains (delMIC), GGFRSLQ, proximal to the N-terminus of eIF4G1. Heterozygous Eif4g1^+/delMIC animals were crossed to generate mice homozygously deleted for microexons (Eif4g1^delMIC/delMIC). PCR and Sanger sequencing confirmed successful deletions.
Allele Type: Knockout
Strain of Origin: C57BL/6J
Genetic Background: C57BL/6J
ES Cell Line: Not specified
Mutant ES Cell Line: Not specified
Model Source: PMID 31999954

M_EIF4G1_1_KO_HM

Category
Entity
Quantity
Experimental Paradigm
Age at Testing
Neuroreceptor levels: glutamate receptors: nmda receptors1
Increased
Description: Mutants show increased levels of glun1 in synaptosomal fractions.
Exp Paradigm: Glun1
 Western blot
 8-20 weeks
Synaptic plasticity: hippocampal ltp1
Increased
Description: Mutant ca3-ca1 hippocampal neurons show significant facilitation of protein-synthesis dependent ltp after induction with multiple tetani but not of protein-synthesis independent ltp after milder induction.
Exp Paradigm: NA
 Whole-cell voltage clamp
 8-20 weeks
Spontaneous post synaptic event amplitude: inhibitory currents1
Increased
Description: Mutants show increase in the amplitude of spontaneous inhibitory postsynaptic currents (sipscs) in ca1 hippocampal neurons.
Exp Paradigm: NA
 Whole-cell voltage clamp
 8-20 weeks
Social memory1
Decreased
Description: Mutants show no preference for an unfamiliar over a familiar mouse.
Exp Paradigm: NA
 Three-chamber social approach test
 8-20 weeks
Social interaction1
Decreased
Description: Mutants interact socially less frequently.
Exp Paradigm: NA
 Reciprocal social interaction test
 8-20 weeks
Cued or contextual fear conditioning: memory of context1
Decreased
Description: Mutants show decrease in association of training context with foot shock, indicating impaired hippocampal memory.
Exp Paradigm: NA
 Fear conditioning test
 8-20 weeks
Protein expression level evidence1
Increased
Description: Mutants show increased levels of synaptic proteins neuroligin-2 and gephyrin.
Exp Paradigm: NA
 Western blot
 8-20 weeks
General characteristics1
 No change
 General observations
 P0
Mortality/lethality1
 No change
 General observations
 P0
Size/growth1
 No change
 Body weight measurement
 12 weeks
Anxiety1
 No change
 Elevated zero maze test
 8-20 weeks
Anxiety1
 No change
 Open field test
 8-20 weeks
Cued or contextual fear conditioning: memory of cue1
 No change
 Fear conditioning test
 8-20 weeks
General locomotor activity: ambulatory activity1
 No change
 Elevated zero maze test
 8-20 weeks
Motor coordination and balance1
 No change
 Accelerating rotarod test
 8-20 weeks
Electroretinogram (erg)1
 No change
 Electroretinogram (erg)
 8-20 weeks
Epsp-spike relationship1
 No change
 Whole-cell voltage clamp
 8-20 weeks
Intrinsic membrane properties1
 No change
 Whole-cell voltage clamp
 8-20 weeks
Membrane potential1
 No change
 Whole-cell voltage clamp
 8-20 weeks
Miniature post synaptic current amplitude: excitatory1
 No change
 Whole-cell voltage clamp
 8-20 weeks
Miniature post synaptic current amplitude: inhibitory1
 No change
 Whole-cell voltage clamp
 8-20 weeks
Miniature post synaptic current frequency: excitatory1
 No change
 Whole-cell voltage clamp
 8-20 weeks
Miniature post synaptic current frequency: inhibitory1
 No change
 Whole-cell voltage clamp
 8-20 weeks
Presynaptic function: paired-pulse facilitation1
 No change
 Whole-cell voltage clamp
 8-20 weeks
Spontaneous post synaptic event amplitude: excitatory currents1
 No change
 Whole-cell voltage clamp
 8-20 weeks
Spontaneous post synaptic event frequency: excitatory currents1
 No change
 Whole-cell voltage clamp
 8-20 weeks
Spontaneous post synaptic event frequency: inhibitory currents1
 No change
 Whole-cell voltage clamp
 8-20 weeks
Synaptic plasticity: hippocampal ltd1
 No change
 Whole-cell voltage clamp
 8-20 weeks
Synaptic transmission: excitatory1
 No change
 Whole-cell voltage clamp
 8-20 weeks
Repetitive digging1
 No change
 Marble-burying test
 8-20 weeks
Hearing1
 No change
 Auditory brainstem response test
 8-20 weeks
Aggression1
 No change
 Resident-intruder test
 8-20 weeks
Social approach1
 No change
 Three-chamber social approach test
 8-20 weeks
 Not Reported: Circadian sleep/wake cycle, Communications, Immune response, Maternal behavior, Physiological parameters, Seizure

M_EIF4G1_2_KO_HT

Category
Entity
Quantity
Experimental Paradigm
Age at Testing
Social memory1
Decreased
Description: Mutants show no preference for an unfamiliar over a familiar mouse.
Exp Paradigm: NA
 Three-chamber social approach test
 8-20 weeks
Size/growth1
 No change
 Body weight measurement
 12 weeks
Anxiety1
 No change
 Elevated zero maze test
 8-20 weeks
Anxiety1
 No change
 Open field test
 8-20 weeks
General locomotor activity: ambulatory activity1
 No change
 Elevated zero maze test
 8-20 weeks
Motor coordination and balance1
 No change
 Accelerating rotarod test
 8-20 weeks
Repetitive digging1
 No change
 Marble-burying test
 8-20 weeks
Aggression1
 No change
 Resident-intruder test
 8-20 weeks
 Not Reported: Circadian sleep/wake cycle, Communications, Immune response, Learning & memory, Maternal behavior, Molecular profile, Neuroanatomy / ultrastructure / cytoarchitecture, Neurophysiology, Physiological parameters, Seizure, Sensory

 

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