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Relevance to Autism

A de novo missense variant that was predicted by PolyPhen-2 to be probably damaging (Mis3) was identified in an ASD proband from the Autism Sequencing Consortium (De Rubeis et al., 2014). Ruzzo et al., 2019 identified three multiplex ASD families from the iHART cohort in which at least one proband in each family had a 2.5-kb deletion in the promoter of the DLG2 gene; no deletions were found to overlap the DLG2 promoter in 26,565 controls, and this deletion was determined to be significantly associated with ASD (3 of 484 unrelated affected children vs. 0 of 2,889 WGS controls, two-sided Fishers exact test, p = 0.003, OR = Inf, 95% CI = 2.47-Inf).

Molecular Function

This gene encodes a member of the membrane-associated guanylate kinase (MAGUK) family. The encoded protein forms a heterodimer with a related family member that may interact at postsynaptic sites to form a multimeric scaffold for the clustering of receptors, ion channels, and associated signaling proteins.

External Links

        

References

Type
Title
Type of Disorder
Associated Disorders
Author, Year
Primary
Synaptic, transcriptional and chromatin genes disrupted in autism.
ASD
Support
Reduced expression of the psychiatric risk gene DLG2 (PSD93) impairs hippocampal synaptic integration and plasticity
Support
Integrating de novo and inherited variants in 42
ASD
Support
Behavioural and molecular characterisation of the Dlg2 haploinsufficiency rat model of genetic risk for psychiatric disorder
Support
A Deficiency of the Psychiatric Risk Gene DLG2/PSD-93 Causes Excitatory Synaptic Deficits in the Dorsolateral Striatum
Support
Transcriptional programs regulating neuronal differentiation are disrupted in DLG2 knockout human embryonic stem cells and enriched for schizophrenia and related disorders risk variants
Support
Impaired Neurodevelopmental Genes in Slovenian Autistic Children Elucidate the Comorbidity of Autism With Other Developmental Disorders
ASD
ADHD, DD, ID
Support
Cross-Disorder Analysis of Genic and Regulatory Copy Number Variations in Bipolar Disorder
BPD, SCZ
Support
DD, ID
ASD, ADHD, epilepsy/seizures
Support
Enhancing DLG2 Implications in Neuropsychiatric Disorders: Analysis of a Cohort of Eight Patients with 11q14.1 Imbalances
ID
ASD or autistic features, ADHD, ODD, epilepsy/seiz
Support
Support
Selective behavioural impairments in mice heterozygous for the cross disorder psychiatric risk gene DLG2
Recent Recommendation
Inherited and De Novo Genetic Risk for Autism Impacts Shared Networks.
ASD

Rare

Variant ID
Variant Type
Allele Change
Residue Change
Inheritance Pattern
Inheritance Association
Family Type
Author, Year
 GEN1107R001 
 missense_variant 
 c.1793C>G 
 p.Thr598Arg 
 De novo 
  
  
 GEN1107R002 
 copy_number_loss 
  
  
 Unknown 
  
 Multiplex 
 GEN1107R003 
 copy_number_loss 
  
  
 Familial 
 Maternal 
 Multiplex 
 GEN1107R004 
 copy_number_loss 
  
  
 Familial 
 Maternal 
 Multiplex 
 GEN1107R005 
 copy_number_loss 
  
  
 Familial 
 Maternal 
  
 GEN1107R006 
 copy_number_loss 
  
  
 Familial 
 Paternal 
  
 GEN1107R007 
 copy_number_loss 
  
  
 Unknown 
  
  
 GEN1107R008 
 copy_number_loss 
  
  
 Familial 
 Paternal 
  
 GEN1107R009 
 copy_number_loss 
  
  
 Familial 
 Paternal 
  
 GEN1107R010 
 copy_number_loss 
  
  
 Familial 
 Maternal 
  
 GEN1107R011 
 copy_number_loss 
  
  
 Unknown 
  
  
 GEN1107R012 
 copy_number_gain 
  
  
 Familial 
 Maternal 
  
 GEN1107R013 
 splice_region_variant 
 c.285A>G 
 p.Gln95%3D 
 De novo 
  
  
 GEN1107R014 
 missense_variant 
 c.1478C>G 
 p.Pro493Arg 
 De novo 
  
  
 GEN1107R015 
 splice_site_variant 
 c.2194-3_2194-2del 
  
 Familial 
 Maternal 
 Multiplex 
 GEN1107R016 
 splice_site_variant 
 c.1497-2A>G 
  
 Familial 
 Maternal 
 Multiplex 
 GEN1107R017 
 copy_number_loss 
  
  
 Unknown 
  
 Unknown 
  et al.  
 GEN1107R018 
 copy_number_loss 
  
  
 Unknown 
  
 Unknown 
  et al.  
 GEN1107R019 
 copy_number_loss 
  
  
 Unknown 
  
 Unknown 
  et al.  
 GEN1107R020 
 copy_number_loss 
  
  
 Unknown 
  
 Multiplex 
  et al.  
 GEN1107R021 
 copy_number_loss 
  
  
 Unknown 
  
  
  et al.  
 GEN1107R022 
 copy_number_loss 
  
  
 Unknown 
  
 Unknown 
  et al.  
 GEN1107R023 
 copy_number_loss 
  
  
 Unknown 
  
 Unknown 
  et al.  
 GEN1107R024 
 copy_number_loss 
  
  
 Unknown 
  
  
  et al.  
 GEN1107R025 
 copy_number_loss 
  
  
 Unknown 
  
 Unknown 
  et al.  
 GEN1107R026 
 copy_number_loss 
  
  
 Unknown 
  
 Simplex 
  et al.  

Common

No Common Variants Available
Chromosome
CNV Locus
CNV Type
# of studies
Animal Model
11
Duplication
 1
 
11
Deletion
 1
 
11
Deletion-Duplication
 34
 
11
Duplication
 2
 
11
Deletion
 1
 
11
Deletion
 1
 

No Animal Model Data Available

 

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