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Relevance to Autism

Two novel overlapping CNVs involving the CHRNB3 gene were identified in unrelated ASD cases in Prasad et al., 2012; however, these CNVs resided within an intronic region of the gene, no comparison with controls was reported, and segregation of the CNV with ASD was incomplete (i.e., not all affected siblings were positive for the CNV).

Molecular Function

The CHRNB3 gene encodes for a member of a superfamily of ligand-gated ion channels (the nicotinic acetylcholine receptors, or nAChRs) that mediate fast signal transmission at synapses.

External Links

        

References

Type
Title
Type of Disorder
Associated Disorders
Author, Year
Primary
A discovery resource of rare copy number variations in individuals with autism spectrum disorder.
ASD
Support
Phenotype-to-genotype approach reveals head-circumference-associated genes in an autism spectrum disorder cohort.
ASD
Macrocephaly
Support
Inherited and De Novo Genetic Risk for Autism Impacts Shared Networks.
ASD

Rare

Variant ID
Variant Type
Allele Change
Residue Change
Inheritance Pattern
Inheritance Association
Family Type
Author, Year
 GEN498R001 
 copy_number_gain 
  
  
 Familial 
 Maternal 
 Multiplex 
 GEN498R002 
 copy_number_loss 
  
  
 Unknown 
 Not maternal 
 Multiplex 
 GEN498R003 
 stop_gained 
 c.1249C>T 
 p.Gln417Ter 
 Familial 
 Maternal 
 Multiplex 
 GEN498R004 
 splice_site_variant 
 c.52+1G>A 
  
 Familial 
 Paternal 
 Simplex 
 GEN498R005 
 splice_site_variant 
 c.52+1G>A 
  
 Familial 
 Paternal 
 Simplex 

Common

No Common Variants Available
Chromosome
CNV Locus
CNV Type
# of studies
Animal Model
8
Deletion
 9
 
8
Duplication
 8
 
8
Duplication
 1
 
8
Duplication
 1
 
8
Duplication
 2
 
8
Duplication
 2
 
8
Duplication
 1
 
8
Duplication
 1
 
8
Duplication
 1
 
8
Deletion-Duplication
 2
 
8
Duplication
 1
 
8
Duplication
 1
 
8
Duplication
 1
 
8
Duplication
 1
 
8
Duplication
 1
 
8
Duplication
 1
 
8
Duplication
 5
 
8
Duplication
 1
 
8
Duplication
 1
 

No Animal Model Data Available

 

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