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Relevance to Autism

A 473 kb deletion harboring the CHRM3 gene was identified in a male patient with autistic disorder who had social withdrawal, eating problems, repetitive stereotypic behaviors including self-injurious head banging and hair pulling, and no seizures, anxiety, or mood swings (Petersen et al., 2012).

Molecular Function

The muscarinic cholinergic receptors belong to a larger family of G protein-coupled receptors. The functional diversity of these receptors is defined by the binding of acetylcholine and includes cellular responses such as adenylate cyclase inhibition, phosphoinositide degeneration, and potassium channel mediation. Muscarinic receptors influence many effects of acetylcholine in the central and peripheral nervous system. The muscarinic cholinergic receptor 3 controls smooth muscle contraction and its stimulation causes secretion of glandular tissue.

External Links

        

References

Type
Title
Type of Disorder
Associated Disorders
Author, Year
Primary
Deletion 1q43 encompassing only CHRM3 in a patient with autistic disorder.
ASD
Positive Association
Common schizophrenia alleles are enriched in mutation-intolerant genes and in regions under strong background selection.
SCZ
Support
Constitutional 763.3 Kb chromosome 1q43 duplication encompassing only CHRM3 gene identified by next generation sequencing (NGS) in a child with int...
ASD, DD, ID
Support
Targeted sequencing and functional analysis reveal brain-size-related genes and their networks in autism spectrum disorders.
ASD
Support
Synaptic, transcriptional and chromatin genes disrupted in autism.
ASD
Support
De novo 911 Kb interstitial deletion on chromosome 1q43 in a boy with mental retardation and short stature.
DD, ID

Rare

Variant ID
Variant Type
Allele Change
Residue Change
Inheritance Pattern
Inheritance Association
Family Type
Author, Year
 GEN490R001 
 copy_number_loss 
  
  
 Unknown 
  
 Unknown 
 GEN490R002 
 copy_number_loss 
  
  
 De novo 
  
 Simplex 
 GEN490R003 
 missense_variant 
 c.1504A>G 
 p.Ile502Val 
 De novo 
  
  
 GEN490R004 
 missense_variant 
 c.1423A>T 
 p.Ile475Phe 
 De novo 
  
 Simplex 
 GEN490R005 
 stop_gained 
 c.1762C>T 
 p.Gln588Ter 
 Familial 
  
 Simplex 
 GEN490R006 
 copy_number_gain 
  
  
 Unknown 
  
 Simplex 
 GEN490R007 
 missense_variant 
 c.824C>T 
 p.Ala275Val 
 De novo 
  
 Simplex 

Common

Variant ID
Polymorphism
SNP ID
Allele Change
Residue Change
Population Origin
Population Stage
Author, Year
 GEN490C001 
 intergenic_variant 
 rs72769124 
 C>A 
  
 40,675 SCZ cases and 64,643 controls (CLOZUK and independent PGC datasets) 
 Discovery 
Chromosome
CNV Locus
CNV Type
# of studies
Animal Model
1
Duplication
 44
 
1
Duplication
 1
 
1
Duplication
 1
 
1
Duplication
 2
 
1
Duplication
 1
 
1
Deletion
 2
 
1
Deletion
 1
 
1
Deletion
 2
 
1
Duplication
 1
 
1
Deletion-Duplication
 27
 
1
Duplication
 10
 

No Animal Model Data Available

 

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