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Relevance to Autism

A de novo frameshift variant in the CELF2 gene was identified in an ASD proband from the Autism Simplex Collection in Yuen et al., 2017. Itai et al., 2021 characterized five unrelated individuals with heterozygous CELF2 variants presenting with developmental and epileptic encephalopathy; autistic features were reported in four of five individuals in this report, and variants identified in patients with developmental and epileptic encephlopathy in this report were experimentally shown to cause aberrant CELF2 cellular localization in transfected cells. Whole-genome sequencing of prefrontal cortex from 59 donors with autism spectrum disorder (ASD) and 15 control donors in Rodin et al., 2021 identified an additional germline loss-of-function variant in CELF2 in brain tissue from a 67-year-old African American male with ASD from the University of Maryland brain bank.

Molecular Function

Members of the CELF/BRUNOL protein family contain two N-terminal RNA recognition motif (RRM) domains, one C-terminal RRM domain, and a divergent segment of 160-230 aa between the second and third RRM domains. Members of this protein family regulate pre-mRNA alternative splicing and may also be involved in mRNA editing, and translation.

External Links

        

References

Type
Title
Type of Disorder
Associated Disorders
Author, Year
Primary
Whole genome sequencing resource identifies 18 new candidate genes for autism spectrum disorder
ASD
Support
The landscape of somatic mutation in cerebral cortex of autistic and neurotypical individuals revealed by ultra-deep whole-genome sequencing
ASD
Epilepsy/seizures
Support
Integrating de novo and inherited variants in 42
ASD
Recent Recommendation
De novo variants in CELF2 that disrupt the nuclear localization signal cause developmental and epileptic encephalopathy
DD, ID, epilepsy/seizures
Autistic features

Rare

Variant ID
Variant Type
Allele Change
Residue Change
Inheritance Pattern
Inheritance Association
Family Type
Author, Year
 GEN1289R001 
 frameshift_variant 
 c.327dup 
 p.Leu110IlefsTer11 
 De novo 
  
 Simplex 
 GEN1289R002 
 missense_variant 
 c.1558C>T 
 p.Pro520Ser 
 De novo 
  
  
 GEN1289R003 
 missense_variant 
 c.1558C>T 
 p.Pro520Ser 
 De novo 
  
  
 GEN1289R004 
 missense_variant 
 c.1516C>G 
 p.Arg506Gly 
 Familial 
 Maternal 
  
 GEN1289R005 
 frameshift_variant 
 c.1562dup 
 p.Met522HisfsTer77 
 De novo 
  
  
 GEN1289R006 
 splice_site_variant 
 c.272-1G>C 
  
 De novo 
  
  
 GEN1289R007 
 stop_gained 
 c.700C>T 
 p.Gln234Ter 
 De novo 
  
  
 GEN1289R008 
 frameshift_variant 
 c.486_487del 
 p.Asn163CysfsTer24 
 De novo 
  
  
 GEN1289R009 
 missense_variant 
 c.1271T>C 
 p.Met424Thr 
 De novo 
  
  

Common

No Common Variants Available
Chromosome
CNV Locus
CNV Type
# of studies
Animal Model
10
Deletion-Duplication
 14
 
10
Deletion-Duplication
 1
 
10
Deletion
 1
 
10
Deletion
 1
 
10
Deletion
 4
 
10
Duplication
 2
 
10
Duplication
 1
 
10
Duplication
 1
 
10
Duplication
 1
 
10
Deletion
 3
 
10
Deletion-Duplication
 3
 

No Animal Model Data Available

 

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