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Relevance to Autism

Genome-wide investigation of tandem repeats in 17,231 genomes of families with autism from the Autism Speaks MSSNG project and the Simons Simplex Collection in Trost et al., 2020 identified a rare tandem repeat expansion in the CDON gene (chr11:126063945-126066092 (AAGAGGTGGCAGTATT)) in six unrelated ASD probands. This tandem repeat in CDON was observed in more than 0.1% of ASD-affected individuals in this cohort and had a frequency less than 0.1% in unaffected siblings, 1000 Genomes, and 1,612 additional population controls from GTEx and the Mayo Clinic Biobank.

Molecular Function

This gene encodes a cell surface receptor that is a member of the immunoglobulin superfamily. The encoded protein contains three fibronectin type III domains and five immunoglobulin-like C2-type domains. This protein is a member of a cell-surface receptor complex that mediates cell-cell interactions between muscle precursor cells and positively regulates myogenesis. Heterozygous mutations in this gene are associated with holoprosencephaly (holoprosencephaly-11; OMIM 614226).

External Links

        

References

Type
Title
Type of Disorder
Associated Disorders
Author, Year
Primary
Genome-wide detection of tandem DNA repeats that are expanded in autism
ASD
DD, ADHD
Support
Integrating de novo and inherited variants in 42
ASD
Support
Mutational Landscape of Autism Spectrum Disorder Brain Tissue
ASD

Rare

Variant ID
Variant Type
Allele Change
Residue Change
Inheritance Pattern
Inheritance Association
Family Type
Author, Year
 GEN1201R001 
 minisatellite 
  
  
 Unknown 
  
 Unknown 
 GEN1201R002 
 minisatellite 
  
  
 Unknown 
  
 Unknown 
 GEN1201R003 
 minisatellite 
  
  
 Unknown 
  
 Unknown 
 GEN1201R004 
 minisatellite 
  
  
 Unknown 
  
 Simplex 
 GEN1201R005 
 minisatellite 
  
  
 Unknown 
  
 Simplex 
 GEN1201R006 
 minisatellite 
  
  
 Unknown 
  
 Simplex 
 GEN1201R007 
 missense_variant 
 c.1373G>A 
 p.Arg458Gln 
 Unknown 
  
  
 GEN1201R008 
 missense_variant 
 c.3544C>T 
 p.Pro1182Ser 
 De novo 
  
  
 GEN1201R009 
 missense_variant 
 c.2644G>A 
 p.Val882Ile 
 De novo 
  
  
 GEN1201R010 
 synonymous_variant 
 c.2034A>G 
 p.Thr678%3D 
 De novo 
  
  
 GEN1201R011 
 missense_variant 
 c.3524G>A 
 p.Ser1175Asn 
 De novo 
  
  
 GEN1201R012 
 missense_variant 
 c.1846C>G 
 p.Arg616Gly 
 De novo 
  
  
 GEN1201R013 
 splice_site_variant 
 c.497-2A>G 
  
 De novo 
  
 Simplex 
 GEN1201R014 
 synonymous_variant 
 c.202T>C 
 p.Leu68%3D 
 De novo 
  
 Simplex 
 GEN1201R015 
 stop_gained 
 c.1372C>T 
 p.Arg458Ter 
 Familial 
 Maternal 
 Multiplex 

Common

No Common Variants Available
Chromosome
CNV Locus
CNV Type
# of studies
Animal Model
11
Duplication
 1
 
11
Duplication
 1
 
11
Deletion
 9
 
11
Duplication
 1
 
11
Deletion-Duplication
 5
 
11
Deletion
 2
 
11
Deletion
 9
 

No Animal Model Data Available

 

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