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Relevance to Autism

In a genome-wide association study of 2165 participants from the Autism Genetic Resource Exchange (AGRE) performed to examine associations between genomic loci and endophenotypes associated with ASDs, it was shown that item 27 ("association of loss of motor, self-help, play, social, or movement skills with physical illness") on the Autism Diagnostic Interview-Revised (ADIR ) is significantly associated with the BIN1 gene (Connolly et al., 2012).

Molecular Function

This gene encodes several isoforms of a nucleocytoplasmic adaptor protein, one of which was initially identified as a MYC-interacting protein with features of a tumor suppressor. Isoforms that are expressed in the central nervous system may be involved in synaptic vesicle endocytosis and may interact with dynamin, synaptojanin, endophilin, and clathrin.

External Links

        

References

Type
Title
Type of Disorder
Associated Disorders
Author, Year
Primary
A genome-wide association study of autism incorporating autism diagnostic interview-revised, autism diagnostic observation schedule, and social res...
ASD
Support
Integrating de novo and inherited variants in 42
ASD
Support
A discovery resource of rare copy number variations in individuals with autism spectrum disorder.
ASD
Support
Phenotype of a patient with recessive centronuclear myopathy and a novel BIN1 mutation.
ID
Centronuclear myopathy

Rare

Variant ID
Variant Type
Allele Change
Residue Change
Inheritance Pattern
Inheritance Association
Family Type
Author, Year
 GEN425R001a 
 missense_variant 
 c.461G>A 
 p.Arg154Gln 
 Unknown 
  
 Simplex 
 GEN425R002 
 copy_number_loss 
  
  
 Unknown 
  
 Unknown 
 GEN425R003 
 intron_variant 
 c.954+1487_954+1496del 
  
 De novo 
  
 Simplex 
 GEN425R004 
 splice_site_variant 
 c.1264-11_1270del 
  
 Familial 
 Paternal 
 Multiplex 

Common

Variant ID
Polymorphism
SNP ID
Allele Change
Residue Change
Population Origin
Population Stage
Author, Year
 GEN425C001 
 intergenic_variant 
 rs11899372 
  
  
 Discovery cohort: 2165 participants from AGRE 
 Discovery 
 GEN425C002 
 intergenic_variant 
 rs11899372 
  
  
 Replication cohort: 1168 families from the Autism Genome Project (AGP) 
 Replication 
Chromosome
CNV Locus
CNV Type
# of studies
Animal Model
2
Duplication
 1
 
2
Duplication
 1
 
2
Deletion
 1
 
2
Deletion-Duplication
 18
 
2
Duplication
 1
 

No Animal Model Data Available


Interactor Symbol Interactor Name Interactor Organism Entrez ID Uniprot ID Interaction Type Evidence Reference
ACTA1 actin, alpha 1, skeletal muscle 100009506 F-actin cosedimentation assay
D'Alessandro M , et al. 2015
BIN2 Bridging integrator 2 51411 Q9UBW5 IP; LC-MS/MS
Huttlin EL , et al. 2015
CACNA1C calcium channel, voltage-dependent, L type, alpha 1C subunit 775 Q13936 IP/WB; Biotinylation assay; TIRF
Hong TT , et al. 2010
CLIP1 CAP-GLY domain containing linker protein 1 6249 P30622 Y2H; Co-localization; IP/WB
D'Alessandro M , et al. 2015
DGUOK deoxyguanosine kinase 1716 E5KSL5 IP; LC-MS/MS
Huttlin EL , et al. 2015
GRINL1A polymerase (RNA) II (DNA directed) polypeptide M 81488 P0CAP1 IP; LC-MS/MS
Huttlin EL , et al. 2015
NCAPD3 non-SMC condensin II complex, subunit D3 23310 P42695 IP; LC-MS/MS
Huttlin EL , et al. 2015
NUFIP1 Nuclear FMRP Interacting Protein 1 26747 Q9UHK0 IP; LC-MS/MS
Huttlin EL , et al. 2015
SYNE2 spectrin repeat containing, nuclear envelope 2 23224 Q8WXH0 in vitro binding assay; Y2H; Co-localization
D'Alessandro M , et al. 2015

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