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Relevance to Autism

Transgenic mice engineered to overexpress the product of -secretase cleavage of human APP (sAPP) displayed hypoactivity and impaired sociability, and elevations in sAPP levels were observed in brains of autistic patients compared to controls (Bailey et al., 2013). Previous reports had demonstrated elevated plasma levels of sAPP in patients with severe autism (Ray et al., 2011).

Molecular Function

This gene encodes a protein that functions as a cell surface receptor and performs physiological functions on the surface of neurons relevant to neurite growth, neuronal adhesion and axonogenesis. The protein is also cleaved by a number of secretases to form a number of peptides, some of which form the protein basis of the amyloid plaques found in the brains of patients with Alzheimer disease. Mutations in this gene have been implicated in autosomal dominant Alzheimer disease and cerebroarterial amyloidosis (cerebral amyloid angiopathy).

External Links

        

References

Type
Title
Type of Disorder
Associated Disorders
Author, Year
Primary
GFAP expression and social deficits in transgenic mice overexpressing human sAPP.
Support
ASD, DD, ID, epilepsy/seizures
Support
Increased secreted amyloid precursor protein- (sAPP) in severe autism: proposal of a specific, anabolic pathway and putative biomarker.
Support
High levels of Alzheimer beta-amyloid precursor protein (APP) in children with severely autistic behavior and aggression.

Rare

Variant ID
Variant Type
Allele Change
Residue Change
Inheritance Pattern
Inheritance Association
Family Type
Author, Year
 GEN570R001a 
 missense_variant 
 c.440A>G 
 p.His147Arg 
 Familial 
 Both parents 
 Simplex 
 GEN570R002 
 stop_gained 
 c.1075C>T 
 p.Arg359Ter 
 Familial 
 Maternal 
 Multiplex 

Common

No Common Variants Available
Chromosome
CNV Locus
CNV Type
# of studies
Animal Model
21
Duplication
 3
 
21
Deletion
 2
 
21
Deletion
 1
 
21
Duplication
 11
 
21
Deletion
 1
 
21
Duplication
 2
 
21
Deletion
 2
 
21
Deletion-Duplication
 16
 

Model Summary

Corresponding to increase in levels of secreted APP, seen in children with autism, phenotypes present in a mouse model expressing a transgene for secreted APP alpha were characterized.

References

Type
Title
Author, Year
Primary
GFAP expression and social deficits in transgenic mice overexpressing human sAPP.

M_APP_1_TG_HM

Model Type: Genetic
Model Genotype: Homozygous
Mutation: Pronuclear injection using a 1.8 kb genomic fragment transcribing hsAPP-alpha695 subcloned into a MoPrP.Xho vector.
Allele Type: Transgenic
Strain of Origin:
Genetic Background: C57BL/6
ES Cell Line:
Mutant ES Cell Line:
Model Source:

M_APP_1_TG_HM

Category
Entity
Quantity
Experimental Paradigm
Age at Testing
General locomotor activity1
Decreased
Description: Decreased locomotor activity indicated by less distance traveled in apparatus
Exp Paradigm: Open field task
 Open field test
 Unreported
Social interaction1
Decreased
Description: Decreased sociability indicated by decrease time spent with stranger mice
Exp Paradigm: Three chambered test
 Three-chamber social approach test
 Unreported
Cytokine levels1
Increased
Description: Increased il6 levels indicated by increased mean concentration of il-6 per milligram of protein
Exp Paradigm: Elisa analysis of brain homogenates
 Elisa
 3 months
Targeted expression1
Increased
Description: Increased expression of human secreted app alpha fragments in brain regions
Exp Paradigm: Human sapp alpha expression
 Immunohistochemistry
 3 months
Protein expression level evidence1
Increased
Description: Increased expression of protein fragment of secreted app alpha
Exp Paradigm: Human sapp alpha protein expression-western blot
 Western blot
 3 months
Protein expression level evidence1
Increased
Description: Increased protein expression of gp130 and nicd
Exp Paradigm: Gp130, nicd expression
 Western blot
 3 months
Protein expression level evidence1
Increased
Description: Increased expression of protein fragment of secreted app alpha
Exp Paradigm: Human sapp alpha protein expression- elisa
 Elisa
 3 months
Protein expression level evidence1
Increased
Description: Increased gfap expression in hippocampus and entorhinal cortex
Exp Paradigm: Gfap expression-western blot
 Western blot
 1, 3, 6 months
Protein expression level evidence1
Increased
Description: Increased gfap expression in hippocampus and entorhinal cortex
Exp Paradigm: Gfap expression- immunohistochemistry
 Immunohistochemistry
 1, 3, 6 months
Anxiety1
 No change
 Open field test
 Unreported
 Not Reported: Circadian sleep/wake cycle, Communications, Developmental profile, Learning & memory, Maternal behavior, Neuroanatomy / ultrastructure / cytoarchitecture, Neurophysiology, Physiological parameters, Repetitive behavior, Seizure, Sensory


Interactor Symbol Interactor Name Interactor Organism Entrez ID Uniprot ID Interaction Type Evidence Reference
AARS2 alanyl-tRNA synthetase 2, mitochondrial 57505 Q5JTZ9 IP; LC-MS/MS
Huttlin EL , et al. 2015
ACADL acyl-CoA dehydrogenase, long chain 33 P28330 IP; LC-MS/MS
Huttlin EL , et al. 2015
APBA2 amyloid beta (A4) precursor protein-binding, family A, member 2 321 Q59G28 IP/WB
Araki Y , et al. 2003
APBA3 Amyloid beta A4 precursor protein-binding family A member 3 9546 O96018 IP; LC-MS/MS
Huttlin EL , et al. 2015
APBB1 Amyloid beta A4 precursor protein-binding family B member 1 322 O00213 IP; LC-MS/MS
Huttlin EL , et al. 2015
APBB2 amyloid beta (A4) precursor protein-binding, family B, member 2 323 Q92870 IP; LC-MS/MS
Huttlin EL , et al. 2015
APBB3 Amyloid beta A4 precursor protein-binding family B member 3 10307 O95704 IP; LC-MS/MS
Huttlin EL , et al. 2015
Atp1a3 ATPase, Na+/K+ transporting, alpha 3 polypeptide 24213 P06687 Surface plasmon resonance (SPR); IP/WB; Far Western Blot; Cell surface binding assay; IP; LC-MS/MS
Ohnishi T , et al. 2015
BCL11A B-cell CLL/lymphoma 11A (zinc finger protein) 53335 Q9H165 ProtoArray
Olh J , et al. 2011
C15ORF43 Uncharacterized protein C15orf43 145645 Q8NHR7 Antibody Microarray
Olh J , et al. 2011
C3ORF17 chromosome 3 open reading frame 17 25871 Q6NW34 IP; LC-MS/MS
Huttlin EL , et al. 2015
CASC4 cancer susceptibility candidate 4 113201 Q6P4E1 IP/WB
Olh J , et al. 2011
CBX6 chromobox homolog 6 23466 O95503 IP; LC-MS/MS
Huttlin EL , et al. 2015
CES2 carboxylesterase 2 8824 O00748 IP; LC-MS/MS
Huttlin EL , et al. 2015
CES3 Carboxylesterase 3 23491 Q6UWW8 IP; LC-MS/MS
Huttlin EL , et al. 2015
CHD8 chromodomain helicase DNA binding protein 8 57680 Q9HCK8 CHIP-seq
Cotney J , et al. 2015
CHRNA7 cholinergic receptor, nicotinic, alpha 7 (neuronal) 1139 P36544 IP/WB; in vitro binding assay
Wang HY , et al. 2000
CKAP2 cytoskeleton associated protein 2 26586 Q8WWK9 IP; LC-MS/MS
Huttlin EL , et al. 2015
CLEC12A C-type lectin domain family 12 member A 160364 Q5QGZ9-1 IP; LC-MS/MS
Huttlin EL , et al. 2015
COL18A1 MECP2 80781 D3DSM5 IP; LC-MS/MS
Huttlin EL , et al. 2015
CTNNB1 catenin (cadherin-associated protein), beta 1, 88kDa 1499 Q9WU82 Reconstituted complex; ProtoArray; High-throughput fluorescence polarization interaction analysis assay
Olh J , et al. 2011
CUL3 cullin 3 8452 B7Z600 Protein microarray
Olh J , et al. 2011
DISC1 disrupted in schizophrenia 1 27185 Q9NRI5 IP/WB
Young-Pearse TL , et al. 2010
DNAJB9 DnaJ (Hsp40) homolog, subfamily B, member 9 4189 Q6FIF1 IP; LC-MS/MS
Huttlin EL , et al. 2015
EME1 essential meiotic endonuclease 1 homolog 1 (S. pombe) 146956 Q96AY2 IP; LC-MS/MS
Huttlin EL , et al. 2015
F11 Coagulation factor XI 2160 P03951 IP; LC-MS/MS
Huttlin EL , et al. 2015
FGA fibrinogen alpha chain 2243 P02671 Biolayer interferometry
Donner L , et al. 2016
FGB fibrinogen beta chain 2244 P02675 Biolayer interferometry
Donner L , et al. 2016
FGG fibrinogen gamma chain 2266 P02679 Biolayer interferometry
Donner L , et al. 2016
FRMD6 FERM domain containing 6 122786 Q96NE9 IP; LC-MS/MS
Huttlin EL , et al. 2015
GDF11 growth differentiation factor 11 10220 O95390 IP; LC-MS/MS
Huttlin EL , et al. 2015
GSG2 germ cell associated 2 (haspin) 83903 A0PJ70 IP; LC-MS/MS
Huttlin EL , et al. 2015
HS2ST1 heparan sulfate 2-O-sulfotransferase 1 9653 Q7LGA3 IP; LC-MS/MS
Huttlin EL , et al. 2015
IL20RB Interleukin-20 receptor subunit beta 53833 Q6UXL0 IP; LC-MS/MS
Huttlin EL , et al. 2015
INHBE inhibin, beta E 83729 P58166 IP; LC-MS/MS
Huttlin EL , et al. 2015
ITGB3 integrin, beta 3 (platelet glycoprotein IIIa, antigen CD61) 3690 P05106 IP/WB; Biolayer interferometry; Co-localization
Donner L , et al. 2016
KCNJ10 potassium inwardly-rectifying channel, subfamily J, member 10 3766 P78508 Protein-fragment complementation assay
Olh J , et al. 2011
KEAP1 kelch-like ECH-associated protein 1 9817 Q14145 IP; LC-MS/MS
Huttlin EL , et al. 2015
LMX1B LIM homeobox transcription factor 1, beta 4010 O60663 ProtoArray
Olh J , et al. 2011
LRRC1 leucine rich repeat containing 1 55227 Q9BTT6 ProtoArray
Olh J , et al. 2011
MAP7 microtubule-associated protein 7 9053 B7Z400 IP; LC-MS/MS
Huttlin EL , et al. 2015
MAP7D1 MAP7 domain containing 1 55700 Q3KQU3 IP; LC-MS/MS
Huttlin EL , et al. 2015
MCM10 minichromosome maintenance complex component 10 55388 Q7L590 IP; LC-MS/MS
Huttlin EL , et al. 2015
NDUFA5 NADH dehydrogenase (ubiquinone) 1 alpha subcomplex, 5, 13kDa 4698 Q16718 ProtoArray
Olh J , et al. 2011
NF1 neurofibromin 1 4763 P21359 Y2H; IP/WB
De Schepper S , et al. 2005
NME2 NME/NM23 nucleoside diphosphate kinase 2 4831 P22392 IP; LC-MS/MS
Huttlin EL , et al. 2015
NTRK3 neurotrophic tyrosine kinase, receptor, type 3 4916 Q16288 ProtoArray
Olh J , et al. 2011
OBSL1 obscurin-like 1 23363 O75147 IP; LC-MS/MS
Huttlin EL , et al. 2015
PHF8 PHD finger protein 8 23133 Q9UPP1 Protein microarray
Olh J , et al. 2011
POGZ pogo transposable element with ZNF domain 23126 B4DTP8 Protein microarray
Olh J , et al. 2011
PRICKLE2 prickle homolog 2 (Drosophila) 166336 Q7Z3G6 Protein microarray
Olh J , et al. 2011
PTCD2 pentatricopeptide repeat domain 2 79810 Q8WV60 IP; LC-MS/MS
Huttlin EL , et al. 2015
QTRT1 queuine tRNA-ribosyltransferase 1 81890 Q71RF8 IP; LC-MS/MS
Huttlin EL , et al. 2015
SCN8A sodium channel, voltage gated, type VIII, alpha subunit 6334 Q9UQD0 IP/WB; Co-localization; Proximity ligation assay
Liu C , et al. 2015
SETBP1 SET binding protein 1 26040 Q9Y6X0 ProtoArray
Olh J , et al. 2011
SHANK3 SH3 and multiple ankyrin repeat domains 3 85358 Q9BYB0 Y2H
Sakai Y , et al. 2011
Snap25 synaptosomal-associated protein 25 25012 P60881 in vitro binding assay
Yang Y , et al. 2015
SND1 staphylococcal nuclease and tudor domain containing 1 27044 Q7KZF4 ProtoArray
Olh J , et al. 2011
SOX5 SRY (sex determining region Y)-box 5 6660 P35711 ProtoArray
Olh J , et al. 2011
Stx1a syntaxin 1A (brain) 116470 P32851 in vitro binding assay
Yang Y , et al. 2015
SULF1 sulfatase 1 23213 Q8IWU6 IP; LC-MS/MS
Huttlin EL , et al. 2015
SULF2 sulfatase 2 55959 Q8IWU5 IP; LC-MS/MS
Huttlin EL , et al. 2015
SYT17 synaptotagmin XVII 51760 Q9BSW7 ProtoArray
Olh J , et al. 2011
TIMP3 TIMP metallopeptidase inhibitor 3 7078 P35625 IP; LC-MS/MS
Huttlin EL , et al. 2015
TMEM30A transmembrane protein 30A 55754 Q9NV96 IP; LC-MS/MS
Huttlin EL , et al. 2015
TMEM30B Cell cycle control protein 50B 161291 Q3MIR4 IP; LC-MS/MS
Huttlin EL , et al. 2015
TOP1 topoisomerase (DNA) I 7150 P11387 Protein microarray
Olh J , et al. 2011
TOP3B topoisomerase (DNA) III beta 8940 O95985 HITS-CLIP
Xu D , et al. 2013
TRPC6 Short transient receptor potential channel 6 7225 Q9Y210 IP/WB; Co-localization
Wang J , et al. 2015
UTP11L UTP11-like, U3 small nucleolar ribonucleoprotein, (yeast) 51118 Q9Y3A2 IP; LC-MS/MS
Huttlin EL , et al. 2015
WAC WW domain containing adaptor with coiled-coil 51322 Q9BTA9 ProtoArray
Olh J , et al. 2011
ZC3H3 zinc finger CCCH-type containing 3 23144 Q8IXZ2 IP; LC-MS/MS
Huttlin EL , et al. 2015
ZNF107 zinc finger protein 107 51427 Q8WVL4 IP; LC-MS/MS
Huttlin EL , et al. 2015
ZNF431 zinc finger protein 431 170959 Q8TF32 IP; LC-MS/MS
Huttlin EL , et al. 2015
ZNF445 zinc finger protein 445 353274 P59923 IP; LC-MS/MS
Huttlin EL , et al. 2015
ZNF724P zinc finger protein 724, pseudogene 440519 A8MTY0 IP; LC-MS/MS
Huttlin EL , et al. 2015
ZNF92 zinc finger protein 92 168374 Q03936 IP; LC-MS/MS
Huttlin EL , et al. 2015
CACNA1C calcium channel, voltage-dependent, L type, alpha 1C subunit 775 Q13936 IP/WB
Yang L , et al. 2009
Tnfrsf21 tumor necrosis factor receptor superfamily, member 21 94185 Q9EPU5 Co-crystal structure; Biolayer interferometry; Cell surface binding assay
Xu K , et al. 2015

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