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Relevance to Autism

Two de novo loss-of-function (LoF) variants in the ANP32A gene have been identified in ASD probands from the Simons Simplex Collection and the MSSNG cohort (Satterstrom et al., 2020; Zhou et al., 2022). Transmission and de novo association (TADA) analysis of whole-exome and whole-genome sequencing data from the Autism Sequencing Consortium, the Simons Simplex Collection, the MSSNG cohort, and the SPARK cohort in Trost et al., 2022 identified ANP32A as an ASD-associated gene with a false discovery rate (FDR) < 0.1.

Molecular Function

Multifunctional protein that is involved in the regulation of many processes including tumor suppression, apoptosis, cell cycle progression or transcription. Inhibits the histone-acetyltranferase activity of EP300/CREBBP (CREB-binding protein) and EP300/CREBBP-associated factor by histone masking (Seo et al., 2002).

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References

Type
Title
Type of Disorder
Associated Disorders
Author, Year
Primary
Large-Scale Exome Sequencing Study Implicates Both Developmental and Functional Changes in the Neurobiology of Autism
ASD
Support
Integrating de novo and inherited variants in 42
ASD
Support
Regulation of histone acetylation and transcription by nuclear protein pp32, a subunit of the INHAT complex
Recent Recommendation
Genomic architecture of autism from comprehensive whole-genome sequence annotation
ASD

Rare

Variant ID
Variant Type
Allele Change
Residue Change
Inheritance Pattern
Inheritance Association
Family Type
Author, Year
 GEN1376R001 
 frameshift_variant 
 c.90_105del 
 p.Asn30LysfsTer13 
 De novo 
  
 Simplex 
 GEN1376R002 
 frameshift_variant 
 c.695_698del 
 p.Glu232GlyfsTer24 
 De novo 
  
 Simplex 

Common

No Common Variants Available
Chromosome
CNV Locus
CNV Type
# of studies
Animal Model
15
Duplication
 81
  construct
15
Duplication
 1
 
15
Deletion
 1
 
15
Deletion-Duplication
 13
 
15
Deletion
 9
 
15
Deletion
 1
 

No Animal Model Data Available

 

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