Summary Statistics:
ASD Reports: 8
Recent Reports: 1
Annotated variants: 64
Associated CNVs: 8
Evidence score: 3
Gene Score:
Relevance to Autism
Lessel et al., 2020 identified 13 heterozygous variants in the AGO2 gene that impaired shRNA-meidated silencing in 21 patients affected by disturbances in neurological development; all 21 affected individuals presented with intellectual disability, motor delay, and delayed speech and language development, while 9/16 (56%) of affected individuals also presented with autistic features. A rare, likely damaging de novo missense variant in this gene has been identified in a proband from the MSSNG cohort (Zhou et al., 2022). More recently, Tibbe et al., 2026 investigated 45 newly identified individuals carrying 33 distinct AGO2 variants; autistic features were reported in 27/42 individuals in this new cohort.
Molecular Function
This gene encodes a member of the Argonaute family of proteins which play a role in RNA interference. The encoded protein is highly basic, and contains a PAZ domain and a PIWI domain. It may interact with dicer1 and play a role in short-interfering-RNA-mediated gene silencing.
References
Primary
Germline AGO2 mutations impair RNA interference and human neurological development
DD, ID
Autistic features
Support
Deleterious coding variation associated with autism is shared across ancestries.
ASD
Support
Glutamatergic argonaute2 promotes the formation of the neurovascular unit in mice
Lessel-Kreienkamp syndrome
Support
Genomic reanalysis of a pan-European rare-disease resource yields new diagnoses
DD, epilepsy/seizures
Stereotypy
Support
Integrating de novo and inherited variants in 42
ASD
Support
Genetic insights into autism spectrum disorder with intellectual disability: a regional population-based study from Northwest China.
ASD, ID
Support
Genetic variants identification through whole-genome sequencing based on dried blood spots in 92 Chinese children with Autism.
ASD
Recent Recommendation
The clinical and molecular spectrum of AGO2-associated Lessel-Kreienkamp neurodevelopmental syndrome.
Lessel-Kreienkamp syndrome, DD, ID
Autistic features, ADHD, epilepsy/seizures
GEN1222R001
inframe_deletion
c.544_546del
p.Phe182del
De novo
Simplex
GEN1222R002
missense_variant
c.575T>C
p.Leu192Pro
De novo
Simplex
GEN1222R003
missense_variant
c.575T>C
p.Leu192Pro
De novo
GEN1222R004
missense_variant
c.601G>T
p.Gly201Cys
De novo
Simplex
GEN1222R005
missense_variant
c.602G>T
p.Gly201Val
De novo
Simplex
GEN1222R006
missense_variant
c.602G>T
p.Gly201Val
De novo
GEN1222R007
missense_variant
c.609T>A
p.His203Gln
De novo
Simplex
GEN1222R008
missense_variant
c.1070C>T
p.Thr357Met
Familial
Maternal
Simplex
GEN1222R009
missense_variant
c.1070C>T
p.Thr357Met
Familial
Maternal
Simplex
GEN1222R010
missense_variant
c.1070C>T
p.Thr357Met
De novo
GEN1222R011
missense_variant
c.1091T>C
p.Met364Thr
De novo
Simplex
GEN1222R012
missense_variant
c.1091T>C
p.Met364Thr
De novo
Simplex
GEN1222R013
missense_variant
c.1099G>C
p.Ala367Pro
De novo
Simplex
GEN1222R014
missense_variant
c.1717G>A
p.Gly573Ser
De novo
GEN1222R015
missense_variant
c.2197G>C
p.Gly733Arg
De novo
Simplex
GEN1222R016
missense_variant
c.2252G>A
p.Cys751Tyr
De novo
Multiplex (monozygotic twins)
GEN1222R017
missense_variant
c.2252G>A
p.Cys751Tyr
De novo
GEN1222R018
missense_variant
c.2280C>G
p.Ser760Arg
De novo
Simplex
GEN1222R019
copy_number_loss
De novo
GEN1222R020
missense_variant
c.608A>G
p.His203Arg
De novo
Simplex
GEN1222R021
missense_variant
c.200C>T
p.Pro67Leu
Unknown
Simplex
GEN1222R022
missense_variant
c.80C>T
p.Pro27Leu
Unknown
GEN1222R023
synonymous_variant
c.1398T>C
p.His466=
De novo
Simplex
GEN1222R024
intron_variant
c.879-13C>T
p.?
Familial
Paternal
GEN1222R025
missense_variant
c.539C>T
p.Ser180Phe
Familial
Maternal
Multiplex
GEN1222R026
inframe_deletion
c.544_546del
p.Phe182del
De novo
Simplex
GEN1222R027
inframe_deletion
c.544_546del
p.Phe182del
Unknown
GEN1222R028
inframe_deletion
c.579_581del
p.Gly195del
De novo
Simplex
GEN1222R029
missense_variant
c.601G>T
p.Gly201Cys
De novo
Simplex
GEN1222R030
missense_variant
c.608A>G
p.His203Arg
De novo
Simplex
GEN1222R031
missense_variant
c.765G>T
p.Arg255Ser
De novo
Simplex
GEN1222R032
missense_variant
c.995A>C
p.Gln332Pro
Familial
Paternal
Multiplex
GEN1222R033
missense_variant
c.1070C>T
p.Thr357Met
De novo
Simplex
GEN1222R034
missense_variant
c.1075A>C
p.Asn359His
Unknown
Not maternal
GEN1222R035
missense_variant
c.1079A>G
p.Gln360Arg
De novo
Simplex
GEN1222R036
missense_variant
c.1092G>A
p.Met364Ile
De novo
Simplex
GEN1222R037
missense_variant
c.1093A>G
p.Ile365Val
De novo
Simplex
GEN1222R038
missense_variant
c.1093A>G
p.Ile365Val
De novo
Simplex
GEN1222R039
missense_variant
c.1094T>A
p.Ile365Asn
De novo
Simplex
GEN1222R040
missense_variant
c.1115C>A
p.Ala372Glu
De novo
Simplex
GEN1222R041
missense_variant
c.1244C>T
p.Pro415Leu
De novo
Simplex
GEN1222R042
missense_variant
c.1303T>C
p.Trp435Arg
De novo
Simplex
GEN1222R043
missense_variant
c.1517G>A
p.Arg506Gln
De novo
Simplex
GEN1222R044
missense_variant
c.1591G>C
p.Glu531Gln
De novo
Simplex
GEN1222R045
missense_variant
c.1631C>T
p.Thr544Met
Unknown
GEN1222R046
missense_variant
c.1805C>A
p.Pro602His
De novo
Simplex
GEN1222R047
missense_variant
c.1805C>G
p.Pro602Arg
De novo
Simplex
GEN1222R048
missense_variant
c.1805C>G
p.Pro602Arg
De novo
Simplex
GEN1222R049
missense_variant
c.1810G>A
p.Gly604Arg
De novo
Simplex
GEN1222R050
missense_variant
c.1810G>A
p.Gly604Arg
Familial
Maternal
Multiplex
GEN1222R051
missense_variant
c.1810G>A
p.Gly604Arg
Unknown
GEN1222R052
missense_variant
c.1855G>A
p.Asp619Asn
De novo
Simplex
GEN1222R053
missense_variant
c.2140C>T
p.Arg714Trp
De novo
Simplex
GEN1222R054
missense_variant
c.2140C>T
p.Arg714Trp
De novo
Simplex
GEN1222R055
missense_variant
c.2185A>C
p.Asn729His
De novo
Simplex
GEN1222R056
missense_variant
c.2273G>A
p.Gly758Glu
De novo
Simplex
GEN1222R057
missense_variant
c.2281A>T
p.Arg761Trp
Unknown
GEN1222R058
missense_variant
c.2348C>T
p.Thr783Ile
Familial
Paternal
GEN1222R059
missense_variant
c.2375G>A
p.Arg792His
Familial
Maternal
GEN1222R060
missense_variant
c.2375G>A
p.Arg792His
De novo
Simplex
GEN1222R061
missense_variant
c.2383C>T
p.Arg795Cys
De novo
Simplex
GEN1222R062
missense_variant
c.2402C>T
p.Ala801Val
Familial
Paternal
GEN1222R063
missense_variant
c.2435G>A
p.Arg812Gln
De novo
Simplex
GEN1222R064
splice_site_variant
c.519-24_529del
p.?
De novo
Simplex
No Common Variants Available
8
Deletion-Duplication
39
No Animal Model Data Available
No Interactions Available