8q24.22-q24.3CNV Type: Deletion
Largest CNV size: 5000000 bp
Statistics Box:
Number of Reports: 3
Number of Reports: 3
Summary Information
Summary statement in development
Additional Locus Information
References
Major Reports
Title
Author, Year
Report Class
CNV Type
Confirmation of chromosomal microarray as a first-tier clinical diagnostic test for individuals with developmental delay, intellectual disability, ...
Deletion
Minor Reports
Title
Author, Year
Report Class
CNV Type
Clinical genetic testing for patients with autism spectrum disorders.
Deletion
Use of clinical chromosomal microarray in Chinese patients with autism spectrum disorder-implications of a copy number variation involving DPP10.
Duplication
Cases
Cohort ID
Author, Year
Descripton
Cohort Size
Diagnosis
Age
Gender
CNV Size
Deletion
Duplication
Total CNV's
battaglia_13_DD/ID/ASD_discovery_cases
Patients affected by DD/ID/ASD/dysmorphic features of unknown origin observed at the Stella Maris Institute (Pisa, Italy) between May 2004 & December 2011
349
34 cases with borderline intellectual disability, 237 cases with mixed intellectual disability, 78 cases with intellectual disability and ASD (cases referred with a provisional diagnosis of ASD evaluated with ADI-R and ADOS-G)
Range, 5 mos.-19 yrs.
63.9% Male
7000000
1
0
1
mak_17_ASD_discovery_cases
Chinese patients diagnosed with ASD recruited from a child assessment center (Department of Pediatrics and Adolescent Medicine, the University of Hong Kong) between January 2011 and August 2014.
258
Diagnosis of ASD made using DSM-IV-TR or DSM-V; tools such as CARS, CHAT-23 modified, ADI-R, or ADOS were used in difficult cases
Range, 1.5-25 years
83.33% Male
10760000
0
1
1
shen_10_ASD_discovery_cases
Patients from original discovery case cohort that were subsequently used in chromosomal microarray analysis (CMA). Original discovery case cohort (n=933) was 80.9 % male and consisted of 461 patients recruited through Autism Consortium (AC) & 472 patients added through samples from Children's Hospital Boston DNA Diagnostic laboratory (CHB).
848
ASD (initial case cohort of 933 cases consisted of 447 patients diagnosed with autistic disorder, 454 with PDD-NOS, 31 with Asperger disorder, and 1 with CDD. AC Cohort: 54 patients with secondary diagnosis of mental retardation, 36 with seizures, and 16 with multiple congenital anomalies)
5000000
1
0
1
Controls
No Control Data Available
Cases
Cohort ID
Geographical Ancestry
Discovery Method
Platform
Algorithm
Software
Validation Method
battaglia_13_DD/ID/ASD_discovery_cases
Italy
aCGH, array SNP
BACs aCGH, Agilent 44K, Agilent 180K, Affymetrix 6.0
FISH, qPCR
mak_17_ASD_discovery_cases
Chinese
aCGH
NimbleGen CGX-135K or Agilent-CGX 60K
None
shen_10_ASD_discovery_cases
aCGH, array SNP
Agilent 244A, Affymetrix NspI, Affymetrix SytI, Affymetrix 5.0
BRLMM, CNAT4, Partek Genomic Suite
CGH Analytics, DNA Analytics software
None
Controls
No Control Data Available
Cases
Patient ID
Author, Year
Age
Gender
Primary Diagnosis
Clinical Profile
Cognitive Profile
CNV Start
CNV End
CNV Size
Genome Build
Type Method
Validation
battaglia_13_DD/ID/ASD_discovery_cases-case19
7 yrs.
M
Developmental delay/intellectual disability
Autism: no. Epilepsy: no. Dysmorphic features: yes.
Moderate DD/ID
134043704
140951209
6907506
GRCh38
Deletion
Yes
mak_17_ASD_discovery_cases-case5
26 mos.
F
ASD
ASD; unbalanced translocation t(1;8)
134555220
145078636
10523417
GRCh38
Duplication
No
shen_10_ASD_discovery_cases-ASD-09-047
NA
F
ASD
NA
NA
135347956
140377654
5029699
GRCh38
Deletion
No
Controls
No Control Data Available
Cases
Patient ID
Validation Description
Primary Disorder Inheritence
Inheritence
Family Profile
Disease Segregation
Gene Content
Altered Gene Expression
battaglia_13_DD/ID/ASD_discovery_cases-case19
FISH or qPCR
Maternal
Unknown
Unknown
ZFAT-AS1,MIR30B,MIR30D,RPL23AP56,MAPRE1P1,RNU1-35P,RNU6-144P,ZYXP1,C8orf17,CHRAC1,ERICD,MIR151A,RNA5SP278,NCRNA00250,KCNK9,PEG13,AGO2,ZFAT,KHDRBS3,COL22A1,TRAPPC9,PTK2,LINC01591,LINC02055,FAM135B
mak_17_ASD_discovery_cases-case5
Unknown
ZFAT-AS1,MIR30B,MIR30D,RPL23AP56,MAPRE1P1,RNU1-35P,RNU6-144P,ZYXP1,C8orf17,CHRAC1,ERICD,MIR151A,RNA5SP278,LINC01300,MIR1302-7,MIR4472-1,LINC00051,RN7SL260P,ARC,THEM6,SLURP1,LYPD2,SLURP2,LYNX1,ZNHIT1P1,CYP11B1,CDC42P3,LY6E,AK3P2,LY6H,GPIHBP1,GLI4,MINCR,RNU6-220P,RHPN1-AS1,MAFA-AS1,RN7SKP175,MROH6,NAPRT,TIGD5,TSTA3,BREA2,CCDC166,FAM83H,MIR4664,MIR937,MIR6845,MIR661,GRINA,SMPD5,OPLAH,MIR6846,EXOSC4,MIR6847,GPAA1,SHARPIN,MAF1,HGH1,TSSK5P,MIR7112,SCX,MIR6848,SCRT1,TMEM249,FBXL6,MIR939,MIR1234,MIR6849,SLC39A4,MIR6893,TONSL-AS1,MFSD3,RECQL4,C8orf82,RPL8,MIR6850,TMED10P1,ZNF252P-AS1,NCRNA00250,KCNK9,PEG13,AGO2,GPR20,MROH5,HNRNPA1P38,MROH4P,JRK,PSCA,LY6K,LNCOC1,LYNX1-SLURP2,LY6D,CYP11B2,C8orf31,LY6L,ZNF696,TOP1MT,RHPN1,MAFA,GSDMD,EEF1D,PYCR3,ZNF707,MAPK15,SCRIB,PUF60,NRBP2,EPPK1,PARP10,SPATC1,CYC1,WDR97,BOP1,DGAT1,SLC52A2,ADCK5,CPSF1,VPS28,CYHR1,KIFC2,FOXH1,PPP1R16A,GPT,LRRC14,LRRC24,ZNF251,ZNF34,RN7SL395P,ZNF517,COMMD5,ZNF250,ZNF16,ZNF252P,C8orf33,ZFAT,KHDRBS3,COL22A1,TRAPPC9,PTK2,DENND3,SLC45A4,PTP4A3,TSNARE1,ADGRB1,GML,LY6E-DT,ZFP41,ZC3H3,IQANK1,PLEC,MROH1,HSF1,TONSL,ARHGAP39,ZNF7,LINC01591,LINC02055,FAM135B,ZNF623
shen_10_ASD_discovery_cases-ASD-09-047
Maternal
NA
NA
MAPRE1P1,RNU1-35P,RNU6-144P,ZYXP1,C8orf17,KCNK9,PEG13,KHDRBS3,COL22A1,TRAPPC9,LINC02055,FAM135B
Controls
No Control Data Available
No Animal Model Data Available