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Relevance to Autism

A mouse model with a loss-of-function mutation in the ARHGAP33 gene exhibited altered social behavior and dendritic spine and synapse development (Schuster et al., 2015).

Molecular Function

This gene encodes a member of the sorting nexin family. Members of this family are involved in intracellular trafficking.

External Links

        

References

Type
Title
Type of Disorder
Associated Disorders
Author, Year
Primary
NOMA-GAP/ARHGAP33 regulates synapse development and autistic-like behavior in the mouse.
Support
Genetic Variant Analyses Identify Novel Candidate Autism Risk Genes from a Highly Consanguineous Cohort of 104 Families from Oman
ASD
Support
Integrating de novo and inherited variants in 42
ASD
Support
Inherited and De Novo Genetic Risk for Autism Impacts Shared Networks.
ASD
Support
Clinical genomics expands the morbid genome of intellectual disability and offers a high diagnostic yield.
DD, epilepsy/seizures

Rare

Variant ID
Variant Type
Allele Change
Residue Change
Inheritance Pattern
Inheritance Association
Family Type
Author, Year
 GEN713R001a 
 missense_variant 
 c.1495G>A 
 p.Val499Met 
 Familial 
 Both parents 
 Multiplex 
 GEN713R002 
 frameshift_variant 
 c.3166_3167del 
 p.His1056Ter 
 Familial 
 Paternal 
 Multiplex 
 GEN713R003 
 splice_site_variant 
 c.93+1dup 
  
 De novo 
  
  
 GEN713R004 
 missense_variant 
 c.1084C>T 
 p.Arg362Trp 
 De novo 
  
  
 GEN713R005 
 synonymous_variant 
 c.1779G>C 
 p.Thr593= 
 De novo 
  
  
 GEN713R006 
 missense_variant 
 c.2207G>A 
 p.Arg736Gln 
 De novo 
  
  
 GEN713R007 
 missense_variant 
 c.2207G>A 
 p.Arg736Gln 
 De novo 
  
 Simplex 
 GEN713R008a 
 missense_variant 
 c.3691C>T 
 p.Pro1231Ser 
 Unknown 
  
 Simplex 

Common

No Common Variants Available
Chromosome
CNV Locus
CNV Type
# of studies
Animal Model
19
Deletion
 13
 

M_ARHGAP33_2_KO_CDC42_DM

Rescue Type: RESCUE-Genetic
Rescue Paradigm: Double mutant mice: null for Arhgap33 and heterozygous for Cdc42 only in post mitotic neurons ( using Nex1-Cre matings). This rescue approach was developed as Arhgap33 inactivates Cdc42 by aiding its GTPase. Neurons with lesser Cdc42 protein ( in the het ko) would therefore compensate for increased amount of active Cdc42 in the absence of Arhgap33, if Cdc42 was the main player in phenotypes seen in Arhgap33 null mice.

M_ARHGAP33_2_KO_CDC42_DM

Category
Entity
Effect on phenotype Qualification
Restored Treatment improves measured phenotype significantly
Refractory Treatment does not improve measured phenotype (was expected to do so)
Ameliorated Treatment provides partial correction or improvement of measured phenotype
No adverse effect Treatment does not affect the parameter adversely
Sustained effect Treatment has long term effect of restoration or amelioration, tested AFTER stopping administration (not applied for continuing long-term treatment) . Will be applied only where treatment has had restorative effects during administration or in the first battery of tests conducted.
No sustained effect Treatment has no long term of restoration or amelioration detectable, after stopping administration. Will be applied only where treatment has had restorative effects during administration or in the first battery of tests conducted.
Unexpected results Treats an unexpected phenotype
Side effect Exaggerates an unexpected phenotype
Experimental Paradigm
Age at Testing
Spontaneous post synaptic events: excitatory currents1
Refractory
Description: There is effect of loss of one copy of cdc42, in post mitotic neurons, in the frequency of spontaneous post synaptic currents in the arhgap33 mice
Exp Paradigm: NA
 Whole-cell patch clamp
 3 weeks
Social memory1
Refractory
Description: There is no improvement in social memory in arhgap33 mice after losing a copy of cdc42
Exp Paradigm: Males
 Three-chamber social approach test
 Adult
Social approach1
Refractory
Description: There is no improvement in social approach in arhgap33 mice despite loss of a copy of cdc42
Exp Paradigm: Males
 Three-chamber social approach test
 Adult
 Not Reported: Circadian sleep/wake cycle, Communications, Developmental profile, Emotion, Immune response, Learning & memory, Maternal behavior, Molecular profile, Motor phenotype, Neuroanatomy / ultrastructure / cytoarchitecture, Physiological parameters, Repetitive behavior, Seizure, Sensory

M_ARHGAP33_1_KO_HM

Category
Entity
Quantity
Experimental Paradigm
Age at Testing
 Clasping reflex1
 Increased
Description: There is increased hindlimb clasping in male arhgap33 null mice compared to male controls
Exp Paradigm: Males
 Tail suspension test
 Adult
 Spontaneous post synaptic events: excitatory currents1
 Decreased
Description: There is significantly reduced frequency of spontaneous post synaptic currents in the upper layer cortical neurons in brain slices from arhgap33 null mice
Exp Paradigm: NA
 Whole-cell patch clamp
 Adult
 Social approach1
 Decreased
Description: Male arhgap33 null mice show signficantly reduced social approach or sociability compared to control males, in both the partition test and three-chamber social approach test, towards an unfamiliar mouse.
Exp Paradigm: Males- three-chamber social approach test
 Three-chamber social approach test
 Adult
 Nest building behavior1
 Increased
Description: Both male and female arhgap33 null mice show significantly increased nest building behavior, building complex nests, which may be an indication of anxiety as well, the authors have noted
Exp Paradigm: NA
 Nest building assay
 Adult
 Social memory1
 Decreased
Description: Male arhgap33 null mice show signficantly reduced social memory compared to control males, three-chamber social approach test, displaying no preference to an unfamiliar mouse over a familiar mouse
Exp Paradigm: Males
 Three-chamber social approach test
 Adult
 Social approach1
 Decreased
Description: Male arhgap33 null mice show signficantly reduced social approach or sociability compared to control males, in both the partition test and three-chamber social approach test, towards an unfamiliar mouse.
Exp Paradigm: Males-partition test
 Partition test
 Adult
 Anxiety1
 Increased
Description: There is a significant trend in increased anxiety seen in both male and female arhgap33 null mice over a variety of tests, including marble-burying and open field test. even if there is some differences in the types of test the sexes show increased anxiety in, in several parameters both male and female mice show increased anxiety.
Exp Paradigm: Female mice show some differences in the types of tests for anxiety. they show increased grooming and increased latency to enter the center in the open field (novel env.). both male and female mice show increased burrowing and decreased latency to bury marbles showing an increase in anxiety levels, while males also show increased freezing bouts in the open field (novel env.)-marble-burying test
 Marble-burying test
 Adult
 Anxiety1
 Increased
Description: There is a significant trend in increased anxiety seen in both male and female arhgap33 null mice over a variety of tests, including marble-burying and open field test. even if there is some differences in the types of test the sexes show increased anxiety in, in several parameters both male and female mice show increased anxiety.
Exp Paradigm: Female mice show some differences in the types of tests for anxiety. they show increased grooming and increased latency to enter the center in the open field (novel env.). both male and female mice show increased burrowing and decreased latency to bury marbles showing an increase in anxiety levels, while males also show increased freezing bouts in the open field (novel env.)- open field test: freezing, grooming
 Open field test
 Adult
 Anxiety1
 Increased
Description: There is a significant trend in increased anxiety seen in both male and female arhgap33 null mice over a variety of tests, including marble-burying and open field test. even if there is some differences in the types of test the sexes show increased anxiety in, in several parameters both male and female mice show increased anxiety.
Exp Paradigm: Female mice show some differences in the types of tests for anxiety. they show increased grooming and increased latency to enter the center in the open field (novel env.). both male and female mice show increased burrowing and decreased latency to bury marbles showing an increase in anxiety levels, while males also show increased freezing bouts in the open field (novel env.)- defensive burying test
 Defensive burying test
 Adult
Locomotor activity in diurnal cycle1
 No change
 Home cage behavior
 Adult
Coat color1
 No change
 NA
 NA
Skeletal development1
 No change
 NA
 NA
Exploratory activity1
 No change
 Open field test
 Adult
Clasping reflex1
 No change
 Tail suspension test
 NA
Gait1
 No change
 NA
 Adult
General locomotor activity1
 No change
 NA
 Adult
Grip strength1
 No change
 Grip strength test
 Adult
Motor strength and endurance1
 No change
 NA
 NA
Righting response1
 No change
 NA
 Adult
Self grooming: home cage/familiar environment1
 No change
 NA
 NA
Spontaneous and reflexive eye movements1
 No change
 Corneal reflex test
 NA
Tremor1
 No change
 NA
 Adult
Walking backwards1
 No change
 NA
 Adult
Spontaneous post synaptic event amplitude: excitatory currents1
 No change
 Whole-cell patch clamp
 Adult
Respiratory function1
 No change
 NA
 Adult
Stereotypy1
 No change
 NA
 Adult
Olfaction1
 No change
 Buried food test
 Adult
Startle response: acoustic stimulus1
 No change
 Acoustic startle reflex test
 Adult
Vision1
 No change
 Cliff avoidance test
 Adult
Social approach1
 No change
 Partition test
 Adult
 Not Reported: Communications, Immune response, Learning & memory, Maternal behavior, Molecular profile, Neuroanatomy / ultrastructure / cytoarchitecture, Physiological parameters, Seizure


Interactor Symbol Interactor Name Interactor Organism Entrez ID Uniprot ID Interaction Type Evidence Reference
NTRK2 neurotrophic receptor tyrosine kinase 2 4915 Q16620 IP/WB; Co-localization
Nakazawa T , et al. 2016
SORT1 sortilin 1 6272 Q99523 IP/WB; Co-localization
Nakazawa T , et al. 2016
Dlg2 discs, large homolog 2 (Drosophila) 23859 Q91XM9 IP/WB
Schuster S , et al. 2015
Dlg3 discs, large homolog 3 (Drosophila) 53310 P70175 IP/WB
Schuster S , et al. 2015
Dlg4 Postsynaptic density protein 95 13385 Q62108 IP/WB; Co-localization
Schuster S , et al. 2015

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