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Relevance to Autism

Bradbrook et al., 2025 described a cohort of 18 patients with protein-truncating variants in the ZNF865 gene (the majority of which were de novo in origin and clustered toward the C-terminus) presenting with a neurodevelopmental disorder characterized by speech delay, cognitive delay or intellectual disability, hypotonia, brain MRI abnormalities, and dysmorphic features; seven patients were reported to have been diagnosed with autism spectrum disorder, with two additional patients having autistic features without a confirmed diagnosis. Additional de novo variants in ZNF865, including two protein-truncating variants and four missense variants, have been reported in ASD probands from the Simons Simplex Collection, SPARK, the Autism Sequencing Consortium, MSSNG, and a Chinese ASD cohort (Satterstrom et al., 2020; Zhou et al., 2022; Wang et al., 2023).

Molecular Function

Predicted to enable DNA-binding transcription factor activity and RNA polymerase II cis-regulatory region sequence-specific DNA binding activity. Predicted to be involved in regulation of transcription by RNA polymerase II. Predicted to be located in nucleus.

External Links

        

References

Type
Title
Type of Disorder
Associated Disorders
Author, Year
Primary
De Novo Truncating Variants in ZNF865 Cause a Novel Neurodevelopmental Disorder
DD
ASD, epilepsy/seizures
Support
Integrating de novo and inherited variants in 42
ASD
Support
Large-Scale Exome Sequencing Study Implicates Both Developmental and Functional Changes in the Neurobiology of Autism
ASD
Support
De Novo Variants Predominate in Autism Spectrum Disorder
ASD
ID

Rare

Variant ID
Variant Type
Allele Change
Residue Change
Inheritance Pattern
Inheritance Association
Family Type
Author, Year
 GEN1520R001 
 stop_gained 
 c.2395C>T 
 p.Gln799Ter 
 Unknown 
 Not maternal 
  
 GEN1520R002 
 frameshift_variant 
 c.2351del 
 p.Gly784ValfsTer25 
 De novo 
  
  
 GEN1520R003 
 stop_gained 
 c.2304_2305delTG 
 p.Gly770Ter 
 De novo 
  
  
 GEN1520R004 
 frameshift_variant 
 c.2351del 
 p.Gly784ValfsTer25 
 De novo 
  
  
 GEN1520R005 
 stop_gained 
 c.2015C>A 
 p.Ser672Ter 
 De novo 
  
  
 GEN1520R006 
 frameshift_variant 
 c.1951del 
 p.Ala651ProfsTer17 
 Familial 
  
  
 GEN1520R007 
 stop_gained 
 c.2091C>G 
 p.Tyr697Ter 
 De novo 
  
  
 GEN1520R008 
 frameshift_variant 
 c.1616del 
 p.Gly539GlufsTer27 
 De novo 
  
  
 GEN1520R009 
 stop_gained 
 c.2091C>G 
 p.Tyr697Ter 
 De novo 
  
  
 GEN1520R010 
 stop_gained 
 c.2141G>A 
 p.Trp714Ter 
 De novo 
  
  
 GEN1520R011 
 frameshift_variant 
 c.194del 
 p.Pro65ArgfsTer98 
 De novo 
  
  
 GEN1520R012 
 frameshift_variant 
 c.2339del 
 p.Gly780ValfsTer29 
 De novo 
  
  
 GEN1520R013 
 stop_gained 
 c.2142G>A 
 p.Trp714Ter 
 De novo 
  
  
 GEN1520R014 
 stop_gained 
 c.2091C>G 
 p.Tyr697Ter 
 De novo 
  
  
 GEN1520R015 
 stop_gained 
 c.2015C>A 
 p.Ser672Ter 
 De novo 
  
  
 GEN1520R016 
 frameshift_variant 
 c.1573_1574dup 
 p.His526ProfsTer41 
 Unknown 
 Not maternal 
  
 GEN1520R017 
 frameshift_variant 
 c.2398_2399del 
 p.Ser800PhefsTer163 
 De novo 
  
  
 GEN1520R018 
 frameshift_variant 
 c.2363del 
 p.Gly788AlafsTer21 
 De novo 
  
  
 GEN1520R019 
 missense_variant 
 c.1256C>T 
 p.Ala419Val 
 De novo 
  
  
 GEN1520R020 
 missense_variant 
 c.539C>T 
 p.Pro180Leu 
 De novo 
  
 Multiplex 
 GEN1520R021 
 missense_variant 
 c.1381G>T 
 p.Ala461Ser 
 De novo 
  
 Simplex 
 GEN1520R022 
 synonymous_variant 
 c.1999C>T 
 p.Leu667= 
 De novo 
  
 Simplex 
 GEN1520R023 
 frameshift_variant 
 c.2038del 
 p.Asp680IlefsTer6 
 De novo 
  
 Simplex 
 GEN1520R024 
 frameshift_variant 
 c.2952del 
 p.Pro985ArgfsTer97 
 De novo 
  
 Simplex 
 GEN1520R025 
 missense_variant 
 c.2629C>G 
 p.Arg877Gly 
 De novo 
  
 Simplex 
 GEN1520R026 
 missense_variant 
 c.1718C>T 
 p.Thr573Met 
 De novo 
  
  

Common

No Common Variants Available
Chromosome
CNV Locus
CNV Type
# of studies
Animal Model
19
Duplication
 1
 
19
Duplication
 1
 
19
Deletion-Duplication
 30
 
19
Duplication
 6
 

No Animal Model Data Available

No PIN Data Available
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