HELP     Sign In
Search

Relevance to Autism

Chen et al., 2025 integrated cortex cell-specific cis-regulatory element annotations, a deep learning-based variant prediction model, and massively parallel reporter assays to systematically evaluate the functional impact of 227,878 non-coding de novo mutations (ncDNMs) in ASD probands from Simons Simplex Collection (SSC) and Autism Speaks MSSNG resource (MSSNG) cohorts and identified a ncDNM that down-regulated expression of the ZNF644 gene in a MSSNG proband. A de novo loss-of-function variant and a de novo missense variant have also been identified in the ZNF644 gene in ASD probands (Iossifov et al., 2014; Tan et al., 2024).

Molecular Function

The protein encoded by this gene is a zinc finger transcription factor that may play a role in eye development. Defects in this gene have been associated with high myopia (MYP21; OMIM 614167).

External Links

        

References

Type
Title
Type of Disorder
Associated Disorders
Author, Year
Primary
Massively parallel characterization of non-coding de novo mutations in autism spectrum disorder
ASD
Support
Deleterious coding variation associated with autism is shared across ancestries.
ASD
Support
Monoallelic loss-of-function variants in GSK3B lead to autism and developmental delay
ASD
Support
The contribution of de novo coding mutations to autism spectrum disorder
ASD
Recent Recommendation
Approaches for identification of 5' UTR mutations impacting translation and protein production from neurodevelopmental disorder genes
ASD

Rare

Variant ID
Variant Type
Allele Change
Residue Change
Inheritance Pattern
Inheritance Association
Family Type
Author, Year
 GEN1511R001 
 intergenic_variant 
 G>A 
  
 De novo 
  
 Multiplex 
 GEN1511R002 
 missense_variant 
 c.1609G>A 
 p.Glu537Lys 
 De novo 
  
 Simplex 
 GEN1511R003 
 frameshift_variant 
 c.873_876del 
 p.Arg291SerfsTer6 
 De novo 
  
 Simplex 
 GEN1511R004 
 5_prime_UTR_variant 
 c.-10T>A 
  
 De novo 
  
 Simplex 
 GEN1511R005 
 missense_variant 
 c.3058A>C 
 p.Thr1020Pro 
 De novo 
  
 Simplex 

Common

No Common Variants Available
Chromosome
CNV Locus
CNV Type
# of studies
Animal Model
1
Duplication
 1
 

No Animal Model Data Available

 

No Interactions Available
HELP
Copyright © 2017 MindSpec, Inc.