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Relevance to Autism

Analysis of whole-genome sequencing data in Liu et al., 2018 demonstrated that a distal enhancer putatively targeting the ZMIZ1 gene harbored recurrent de novo single-nucleotide variants in ASD-affected cases. Carapito et al., 2019 reported 19 individuals with ZMIZ1 variants presenting with a neurodevelopmental syndrome characterized by developmental delay/intellectual disability, growth failure, feeding difficulties, microcephaly, facial dysmorphism, and various other congenital malformations; behavioral abnormalities, including autism spectrum disorder, were frequently observed in affected individuals.

Molecular Function

This gene encodes a member of the PIAS (protein inhibitor of activated STAT) family of proteins. The encoded protein regulates the activity of various transcription factors, including the androgen receptor, Smad3/4, and p53. The encoded protein may also play a role in sumoylation.

External Links

        

References

Type
Title
Type of Disorder
Associated Disorders
Author, Year
Primary
A Statistical Framework for Mapping Risk Genes from De Novo Mutations in Whole-Genome-Sequencing Studies.
ASD
Support
Integrating de novo and inherited variants in 42
ASD
Support
Trio-based exome sequencing reveals a high rate of the de novo variants in intellectual disability
ID
Support
Mutational Landscape of Autism Spectrum Disorder Brain Tissue
ASD
Support
Prevalence and phenotypic impact of rare potentially damaging variants in autism spectrum disorder
ASD
Support
ASD, DD, ID, epilepsy/seizures
Support
Autosomal dominant inheritance in a recently described ZMIZ1-related neurodevelopmental disorder: Case report of siblings and an affected parent.
ID
ADHD, autistic features
Support
ASD
DD, ID
Support
A de novo t(10;19)(q22.3;q13.33) leads to ZMIZ1/PRR12 reciprocal fusion transcripts in a girl with intellectual disability and neuropsychiatric alt...
ID, epilepsy/seizures
Behavioral abnormalities
Recent recommendation
ZMIZ1 Variants Cause a Syndromic Neurodevelopmental Disorder.
Neurodevelopmental disorder with dysmorphic facies
ASD

Rare

Variant ID
Variant Type
Allele Change
Residue Change
Inheritance Pattern
Inheritance Association
Family Type
Author, Year
 GEN1143R001 
 translocation 
  
  
 De novo 
  
 Simplex 
 GEN1143R002 
 missense_variant 
 c.899C>T 
 p.Thr300Met 
 De novo 
  
 Simplex 
 GEN1143R003 
 missense_variant 
 c.859G>A 
 p.Ala287Thr 
 De novo 
  
 Simplex 
 GEN1143R004 
 frameshift_variant 
 c.3112dup 
 p.Thr1038AsnfsTer4 
 De novo 
  
 Simplex 
 GEN1143R005 
 missense_variant 
 c.899C>T 
 p.Thr300Met 
 De novo 
  
 Simplex 
 GEN1143R006 
 missense_variant 
 c.893C>T 
 p.Thr298Ile 
 De novo 
  
 Simplex 
 GEN1143R007 
 frameshift_variant 
 c.2758dup 
 p.Gln920ProfsTer34 
 De novo 
  
 Simplex 
 GEN1143R008 
 missense_variant 
 c.272A>G 
 p.Lys91Arg 
 De novo 
  
 Simplex 
 GEN1143R009 
 synonymous_variant 
 c.2610C>T 
 p.Ser870= 
 De novo 
  
 Simplex 
 GEN1143R010 
 missense_variant 
 c.887C>A 
 p.Thr296Lys 
 De novo 
  
 Simplex 
 GEN1143R011 
 frameshift_variant 
 c.1386dup 
 p.Thr463HisfsTer14 
 De novo 
  
 Simplex 
 GEN1143R012 
 splice_site_variant 
 c.3097-2A>G 
  
 De novo 
  
 Simplex 
 GEN1143R013 
 frameshift_variant 
 c.3021del 
 p.Phe1008LeufsTer7 
 De novo 
  
 Simplex 
 GEN1143R014 
 frameshift_variant 
 c.1386dup 
 p.Thr463HisfsTer14 
 Unknown 
  
 Multiplex 
 GEN1143R015 
 missense_variant 
 c.887C>T 
 p.Thr296Ile 
 De novo 
  
 Simplex 
 GEN1143R016 
 frameshift_variant 
 c.2835del 
 p.Met946CysfsTer61 
 De novo 
  
 Simplex 
 GEN1143R017 
 translocation 
  
  
 De novo 
  
 Simplex 
 GEN1143R018 
 translocation 
  
  
 De novo 
  
 Simplex 
 GEN1143R019 
 frameshift_variant 
 c.1310del 
 p.Pro437ArgfsTer84 
 Familial 
 Paternal 
 Multiplex 
 GEN1143R020 
 missense_variant 
 c.1744A>G 
 p.Asn582Asp 
 Unknown 
  
  
 GEN1143R021 
 missense_variant 
 c.2456C>T 
 p.Thr819Met 
 Unknown 
  
  
 GEN1143R022 
 splice_region_variant 
 c.2835+4A>T 
  
 De novo 
  
  
 GEN1143R023 
 missense_variant 
 c.10A>G 
 p.Met4Val 
 De novo 
  
 Multiplex 
 GEN1143R024 
 synonymous_variant 
 c.2607G>A 
 p.Pro869%3D 
 De novo 
  
 Simplex 
 GEN1143R025 
 missense_variant 
 c.418T>C 
 p.Ser140Pro 
 Unknown 
  
 Multiplex 
 GEN1143R026 
 missense_variant 
 c.2323G>A 
 p.Glu775Lys 
 Unknown 
  
 Simplex 
 GEN1143R027 
 stop_gained 
 c.328C>T 
 p.Arg110Ter 
 Unknown 
  
 Multiplex 
  et al.  

Common

No Common Variants Available
Chromosome
CNV Locus
CNV Type
# of studies
Animal Model
10
Duplication
 1
 
10
Deletion-Duplication
 16
 

No Animal Model Data Available

No PIN Data Available
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