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Relevance to Autism

Whole-genome sequencing of 3109 samples across 1033 Chinese ASD families from the ACGC cohort in Tan et al., 2026 identified a de novo loss-of-function variant in the the ZBTB34 gene in an ASD proband from the ACGC cohort. TADA analysis of an integrated cohort of over 40,000 ASD cases across unpublished and published global cohort in the same report identified ZBTB34 as an ASD risk gene with a false discovery rate of <0.05; in addition to the loss-of-function variant dentified in the ACGC proband, four ASD-associated de novo missense variants were included in this analysis (two from previously published ASC probands from Fu et al., 2022, two from unpublished SPARK probands).

Molecular Function

Predicted to enable DNA-binding transcription repressor activity, RNA polymerase II-specific and RNA polymerase II cis-regulatory region sequence-specific DNA binding activity. Predicted to be involved in negative regulation of transcription by RNA polymerase II; regulation of cytokine production; and regulation of immune system process. Located in nucleoplasm

External Links

        

References

Type
Title
Type of Disorder
Associated Disorders
Author, Year
Primary
Genomic landscape of rare variants in a Chinese autism cohort and discovery of novel risk genes.
ASD
Support
Rare coding variation provides insight into the genetic architecture and phenotypic context of autism
ASD
Support
ZBTB34, a novel human BTB/POZ zinc finger protein, is a potential transcriptional repressor.

Rare

Variant ID
Variant Type
Allele Change
Residue Change
Inheritance Pattern
Inheritance Association
Family Type
Author, Year
 GEN1568R001 
 stop_gained 
 c.442C>T 
 p.Arg148Ter 
 De novo 
  
 Simplex 
 GEN1568R002 
 missense_variant 
 c.1241C>A 
 p.Thr414Lys 
 De novo 
  
  
 GEN1568R003 
 missense_variant 
 c.222T>G 
 p.Ile74Met 
 De novo 
  
  
 GEN1568R004 
 missense_variant 
 c.1259G>A 
 p.Arg420Gln 
 De novo 
  
 Unknown 
 GEN1568R005 
 synonymous_variant 
 c.762C>T 
 p.Asp254= 
 De novo 
  
 Simplex 
 GEN1568R006 
 missense_variant 
 c.953G>A 
 p.Gly318Glu 
 De novo 
  
 Simplex 

Common

No Common Variants Available
Chromosome
CNV Locus
CNV Type
# of studies
Animal Model
9
Duplication
 1
 
9
Deletion
 1
 
9
Duplication
 1
 
9
Deletion-Duplication
 6
 
9
Deletion
 4
 
9
Duplication
 1
 

No Animal Model Data Available

 

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