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Relevance to Autism

This gene was identified by TADA (transmission and de novo association) analysis of a combined dataset from the Simons Simplex Collection (SSC) and the Autism Sequencing Consortium (ASC) as a gene strongly enriched for variants likely to affect ASD risk with a false discovery rate (FDR) of <0.1 (Sanders et al., 2015); among the variants identified in this gene was one de novo loss-of-function (LoF) variant.

Molecular Function

The protein encoded by this gene acts catalyzes the thiol-dependent hydrolysis of ester, thioester, amide, peptide and isopeptide bonds formed by the C-terminal Gly of ubiquitin (a 76-residue protein attached to proteins as an intracellular targeting signal).

External Links

        

References

Type
Title
Type of Disorder
Associated Disorders
Author, Year
Primary
Insights into Autism Spectrum Disorder Genomic Architecture and Biology from 71 Risk Loci.
ASD
Support
The contribution of de novo coding mutations to autism spectrum disorder
ASD
Support
Integrating de novo and inherited variants in 42
ASD
Support
Massively parallel reporter assays discover de novo exonic splicing mutants in paralogs of Autism genes
ASD
Support
Inherited and De Novo Genetic Risk for Autism Impacts Shared Networks.
ASD

Rare

Variant ID
Variant Type
Allele Change
Residue Change
Inheritance Pattern
Inheritance Association
Family Type
Author, Year
 GEN770R001 
 stop_gained 
 c.1953C>A 
 p.Tyr651Ter 
 De novo 
  
 Simplex 
 GEN770R002 
 missense_variant 
 c.2089C>T 
 p.Arg697Cys 
 De novo 
  
 Simplex 
 GEN770R003 
 stop_gained 
 c.223C>T 
 p.Gln75Ter 
 Familial 
 Paternal 
 Multiplex 
 GEN770R004 
 missense_variant 
 c.743C>A 
 p.Pro248His 
 De novo 
  
 Multiplex 
 GEN770R005 
 intron_variant 
 c.478+1784C>A 
  
 De novo 
  
 Multiplex 
 GEN770R006 
 splice_site_variant 
 c.2073+1G>T 
  
 Familial 
 Maternal 
 Multiplex 
 GEN770R007 
 frameshift_variant 
 c.1965del 
 p.Ser656ValfsTer7 
 Familial 
 Paternal 
 Multiplex 

Common

No Common Variants Available
Chromosome
CNV Locus
CNV Type
# of studies
Animal Model
6
Deletion
 1
 
6
Deletion
 1
 
6
Deletion
 2
 
6
Deletion
 5
 
6
Deletion
 1
 
6
Deletion
 1
 
6
Deletion
 1
 

No Animal Model Data Available

 

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