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Relevance to Autism

Koch et al., 2024 reported 10 affected males from 9 unrelated families carrying variants in the USP27X gene and presenting with an X-linked neurodevelopmental disorder characterized by intellectual disability and/or speech delay, motor delay, autism spectrum disorder, and ADHD; functional characterization of disease-associated missense variants in this gene demonstrated effects on developmentally-relevant protein-protein interactions and/or deubiquitylating activity. Maternally-inherited variants in this gene had previously been identified in affected males from two unrelated families presenting with borderline to moderate intellectual disability, variable absent or poor speech and behavioral problems (Hu et al., 2016). Rare variants in the USP27X gene, including a de novo loss-of-function variant, have also been identified in ASD probands (Satterstrom et al., 2020; Hu et al., 2022; Zhou et al., 2022; Wang et al., 2023).

Molecular Function

This gene encodes a member of the peptidase protein family. The encoded protein functions as a deubiquitinase that is involved in upregulation of the pro-apoptotic Bim protein. This protein may act as a tumor suppressor by increasing levels of Bim to counteract anti-apoptotic signals in cancer cells. Mutations in this gene have been associated with X-linked cognitive disability.

External Links

        

References

Type
Title
Type of Disorder
Associated Disorders
Author, Year
Primary
DD, ID
ASD, ADHD
Support
Integrating de novo and inherited variants in 42
ASD
Support
Clinical Targeted Panel Sequencing Analysis in Clinical Evaluation of Children with Autism Spectrum Disorder in China
ASD
Support
Large-Scale Exome Sequencing Study Implicates Both Developmental and Functional Changes in the Neurobiology of Autism
ASD
Support
X-exome sequencing of 405 unresolved families identifies seven novel intellectual disability genes
ID

Rare

Variant ID
Variant Type
Allele Change
Residue Change
Inheritance Pattern
Inheritance Association
Family Type
Author, Year
 GEN1437R001 
 missense_variant 
 c.1211G>A 
 p.Ser404Asn 
 Familial 
 Maternal 
  
  et al.  
 GEN1437R002 
 missense_variant 
 c.1211G>A 
 p.Ser404Asn 
 Familial 
 Maternal 
 Simplex 
  et al.  
 GEN1437R003 
 missense_variant 
 c.937T>G 
 p.Phe313Val 
 Familial 
 Maternal 
 Simplex 
  et al.  
 GEN1437R004 
 missense_variant 
 c.541A>G 
 p.Lys181Glu 
 Familial 
 Maternal 
 Simplex 
  et al.  
 GEN1437R005 
 missense_variant 
 c.431A>G 
 p.Tyr144Cys 
 Familial 
 Maternal 
  
  et al.  
 GEN1437R006 
 missense_variant 
 c.226G>A 
 p.Gly76Ser 
 Familial 
 Maternal 
 Simplex 
  et al.  
 GEN1437R007 
 frameshift_variant 
 c.1205dup 
 p.Ala403GlyfsTer4 
 Familial 
 Maternal 
 Simplex 
  et al.  
 GEN1437R008 
 stop_gained 
 c.394G>T 
 p.Glu132Ter 
 Unknown 
  
 Extended multiplex 
  et al.  
 GEN1437R009 
 stop_gained 
 c.106C>T 
 p.Gln36Ter 
 Unknown 
  
 Simplex 
  et al.  
 GEN1437R010 
 frameshift_variant 
 c.1026_1030del 
 p.Ser342ArgfsTer14 
 Familial 
 Maternal 
 Extended multiplex 
 GEN1437R011 
 missense_variant 
 c.1141T>C 
 p.Tyr381His 
 Familial 
 Maternal 
 Multiplex 
 GEN1437R012 
 2KB_upstream_variant 
 G>GCCCCCCCCCCCCCCC 
  
 De novo 
  
  
 GEN1437R013 
 missense_variant 
 c.905T>C 
 p.Leu302Ser 
 Unknown 
  
  
 GEN1437R014 
 synonymous_variant 
 c.75A>G 
 p.Leu25= 
 De novo 
  
  
 GEN1437R015 
 frameshift_variant 
 c.1171_1172del 
 p.Gln391ValfsTer5 
 De novo 
  
 Simplex 

Common

No Common Variants Available
Chromosome
CNV Locus
CNV Type
# of studies
Animal Model
X
Deletion-Duplication
 13
 
X
Duplication
 1
 
X
Duplication
 7
 
X
Duplication
 1
 
X
Deletion
 2
 
X
Deletion
 4
 
X
Deletion-Duplication
 1
 
X
Deletion
 1
 
X
Deletion-Duplication
 21
 

No Animal Model Data Available

 

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