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Relevance to Autism

A de novo loss-of-function (LoF) variant in the UNC79 gene was identified in an ASD proband from the Simons Simplex Collection in Iossifov et al., 2014. A second LoF variant in this gene was identified as a mosaic mutation in another ASD proband from the Simons Simplex Collection in Krupp et al., 2017.

Molecular Function

This gene encodes for a component of the NALCN sodium channel complex, a cation channel activated either by neuropeptides substance P or neurotensin that controls neuronal excitability and that is responsible for Na(+) leak currents. The protein encoded by this gene, along with UNC80, is an accessory subunit of the NALCN channel that contributes to the Ca(2+) sensitivity of the channel.

External Links

        

References

Type
Title
Type of Disorder
Associated Disorders
Author, Year
Primary
The contribution of de novo coding mutations to autism spectrum disorder
ASD
Support
Whole-genome deep-learning analysis identifies contribution of noncoding mutations to autism risk
ASD
Support
Whole genome paired-end sequencing elucidates functional and phenotypic consequences of balanced chromosomal rearrangement in patients with develop...
ID
Behavioral abnormalities
Support
ASD
DD, ID
Support
Integrating de novo and inherited variants in 42
ASD
Support
Inherited and De Novo Genetic Risk for Autism Impacts Shared Networks.
ASD
Recent Recommendation
DD, ID
ADHD, epilepsy/seizures, autistic features, stereo
Recent Recommendation
Tissue-specific enhancer functional networks for associating distal regulatory regions to disease
ASD
Recent Recommendation
Exonic Mosaic Mutations Contribute Risk for Autism Spectrum Disorder.
ASD

Rare

Variant ID
Variant Type
Allele Change
Residue Change
Inheritance Pattern
Inheritance Association
Family Type
Author, Year
 GEN976R001 
 frameshift_variant 
 c.5371del 
 p.Leu1791Ter 
 De novo 
  
 Simplex 
 GEN976R002 
 stop_gained 
 c.6208C>T 
 p.Arg2070Ter 
 De novo 
  
 Simplex 
 GEN976R003 
 translocation 
  
  
 De novo 
  
  
 GEN976R004 
 frameshift_variant 
 c.5535_5536dup 
 p.Asn1846ArgfsTer97 
 Familial 
 Maternal 
 Multiplex 
 GEN976R005 
 intergenic_variant 
 C>T 
  
 De novo 
  
 Simplex 
 GEN976R006 
 missense_variant 
 c.62G>A 
 p.Arg21Gln 
 De novo 
  
  
 GEN976R007 
 synonymous_variant 
 c.5475G>A 
 p.Gly1825%3D 
 De novo 
  
  
 GEN976R008 
 synonymous_variant 
 c.432A>G 
 p.Leu144%3D 
 De novo 
  
 Multiplex 
 GEN976R009 
 synonymous_variant 
 c.5475G>A 
 p.Gly1825%3D 
 De novo 
  
 Simplex 
 GEN976R010 
 splice_region_variant 
 c.7815+3A>T 
  
 De novo 
  
 Simplex 
 GEN976R011 
 missense_variant 
 c.1580T>C 
 p.Val527Ala 
 De novo 
  
  
 GEN976R012 
 missense_variant 
 c.6005C>T 
 p.Thr2002Ile 
 De novo 
  
  
 GEN976R013 
 inframe_deletion 
 c.6315_6317del 
 p.Ala2106del 
 De novo 
  
  
 GEN976R014 
 synonymous_variant 
 c.6651C>T 
 p.Pro2217%3D 
 De novo 
  
  
 GEN976R015 
 frameshift_variant 
 c.2961dup 
 p.Cys988MetfsTer55 
 De novo 
  
 Simplex 
 GEN976R016 
 stop_gained 
 c.5326C>T 
 p.Gln1776Ter 
 De novo 
  
 Simplex 
 GEN976R017 
 splice_site_variant 
 c.3754+1G>A 
  
 De novo 
  
 Simplex 
 GEN976R018 
 frameshift_variant 
 c.149del 
 p.Leu50CysfsTer15 
 De novo 
  
 Simplex 
 GEN976R019 
 frameshift_variant 
 c.6119del 
 p.Val2040GlyfsTer14 
 De novo 
  
 Simplex 
 GEN976R020 
 stop_gained 
 c.2070C>A 
 p.Cys690Ter 
 De novo 
  
 Simplex 
 GEN976R021 
 missense_variant 
 c.4781G>T 
 p.Gly1594Val 
 Unknown 
  
 Simplex 
 GEN976R022 
 missense_variant 
 c.4955T>C 
 p.Phe1652Ser 
 Familial 
 Maternal 
 Simplex 

Common

No Common Variants Available
Chromosome
CNV Locus
CNV Type
# of studies
Animal Model
14
Duplication
 1
 
14
Duplication
 1
 
14
Duplication
 1
 
14
Deletion
 1
 
14
Duplication
 2
 
14
Deletion
 1
 
14
Deletion
 7
 
14
Duplication
 1
 

No Animal Model Data Available

No PIN Data Available
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