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Relevance to Autism

De novo missense variants and transmitted frameshift variants in the UIMC1 gene have been observed in ASD probands in multiple studies (Iossifov et al., 2014; Yuen et al., 2017; Ruzzo et al., 2019). TADA analysis of de novo and transmitted variants from iHART, the Simons Simplex Collection, the Autism Sequencing Consortium, and the Autism Genome Project in Ruzzo et al., 2019 identified UIMC1 as an ASD candidate gene with a false discovery rate (FDR) < 0.1.

Molecular Function

This gene encodes a nuclear protein that interacts with Brca1 (breast cancer 1) in a complex to recognize and repair DNA lesions. This protein binds ubiquitinated lysine 63 of histone H2A and H2AX. This protein may also function as a repressor of transcription.

External Links

        

References

Type
Title
Type of Disorder
Associated Disorders
Author, Year
Primary
The contribution of de novo coding mutations to autism spectrum disorder
ASD
Support
Integrating de novo and inherited variants in 42
ASD
Support
Whole genome sequencing resource identifies 18 new candidate genes for autism spectrum disorder
ASD
Support
Prevalence and architecture of de novo mutations in developmental disorders
Developmental disorders
Recent Recommendation
Large-scale targeted sequencing identifies risk genes for neurodevelopmental disorders
ASD, DD
Recent Recommendation
Inherited and De Novo Genetic Risk for Autism Impacts Shared Networks.
ASD

Rare

Variant ID
Variant Type
Allele Change
Residue Change
Inheritance Pattern
Inheritance Association
Family Type
Author, Year
 GEN1106R001 
 missense_variant 
 c.101G>A 
 p.Arg34His 
 De novo 
  
 Simplex 
 GEN1106R002 
 missense_variant 
 c.1891C>G 
 p.Gln631Glu 
 De novo 
  
 Simplex 
 GEN1106R003 
 missense_variant 
 c.61G>A 
 p.Asp21Asn 
 De novo 
  
 Multiplex 
 GEN1106R004 
 missense_variant 
 c.1288A>G 
 p.Ser430Gly 
 De novo 
  
 Multiplex 
 GEN1106R005 
 frameshift_variant 
 c.1368dup 
 p.Asp457Ter 
 Familial 
 Maternal 
 Multiplex 
 GEN1106R006 
 frameshift_variant 
 c.954dup 
 p.Gly319ArgfsTer9 
 Familial 
 Maternal 
 Multiplex 
 GEN1106R007 
 missense_variant 
 c.1045A>G 
 p.Ile349Val 
 De novo 
  
  
 GEN1106R008 
 missense_variant 
 c.1724A>G 
 p.Tyr575Cys 
 De novo 
  
  
 GEN1106R009 
 missense_variant 
 c.793A>G 
 p.Lys265Glu 
 De novo 
  
  
 GEN1106R010 
 stop_gained 
 c.1870C>T 
 p.Arg624Ter 
 De novo 
  
 Simplex 
 GEN1106R011 
 frameshift_variant 
 c.70del 
 p.Thr24LeufsTer7 
 Familial 
 Maternal 
  
 GEN1106R012 
 splice_site_variant 
 c.233-2A>G 
  
 Familial 
 Maternal 
  
 GEN1106R013 
 frameshift_variant 
 c.954dup 
 p.Gly319ArgfsTer9 
 Familial 
 Maternal 
  
 GEN1106R014 
 frameshift_variant 
 c.954dup 
 p.Gly319ArgfsTer9 
 Familial 
 Maternal 
  
 GEN1106R015 
 stop_gained 
 c.228_232delinsTGCAT 
 p.Gln78Ter 
 Unknown 
  
  
 GEN1106R016 
 frameshift_variant 
 c.820_826del 
 p.Val274IlefsTer12 
 Unknown 
 Not paternal 
  
 GEN1106R017 
 stop_gained 
 c.1870C>T 
 p.Arg624Ter 
 Familial 
 Maternal 
  
 GEN1106R018 
 stop_gained 
 c.1996C>T 
 p.Gln666Ter 
 Unknown 
  
  
 GEN1106R019 
 stop_gained 
 c.1996C>T 
 p.Gln666Ter 
 Familial 
 Paternal 
 Simplex 
 GEN1106R020 
 stop_gained 
 c.1344_1345delinsAT 
 p.Gln449Ter 
 Unknown 
  
  
 GEN1106R021 
 stop_gained 
 c.1344_1345delinsAT 
 p.Gln449Ter 
 Unknown 
  
  
 GEN1106R022 
 splice_site_variant 
 c.-8-20_-3del 
  
 Unknown 
  
  
 GEN1106R023 
 initiator_codon_variant 
 c.2T>C 
 p.Met1? 
 Unknown 
  
  
 GEN1106R024 
 stop_gained 
 c.1555C>T 
 p.Arg519Ter 
 Unknown 
  
  
 GEN1106R025 
 stop_gained 
 c.1870C>T 
 p.Arg624Ter 
 Unknown 
  
  
 GEN1106R026 
 frameshift_variant 
 c.1732del 
 p.His578MetfsTer35 
 Unknown 
  
  
 GEN1106R027 
 frameshift_variant 
 c.1732del 
 p.His578MetfsTer35 
 Unknown 
  
  
 GEN1106R028 
 synonymous_variant 
 c.132C>T 
 p.Ser44%3D 
 De novo 
  
  

Common

No Common Variants Available
Chromosome
CNV Locus
CNV Type
# of studies
Animal Model
5
Duplication
 1
 
5
Duplication
 1
 
5
Duplication
 1
 
5
Duplication
 1
 
5
Deletion-Duplication
 15
 
5
Duplication
 13
 

No Animal Model Data Available

 

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