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Relevance to Autism

De novo variants in this gene were identified in two separate reports using ASD probands from the Simons Simplex Collection (Sanders et al. 2012a, 2012b)

Molecular Function

E3 ubiquitin-protein ligase that accepts ubiquitin from the E2 ubiquitin-conjugating enzyme UBE2D1 in the form of a thioester and then directly transfers the ubiquitin to targeted substrates.

External Links

        

References

Type
Title
Type of Disorder
Associated Disorders
Author, Year
Primary
Sporadic autism exomes reveal a highly interconnected protein network of de novo mutations.
ASD
Support
Multiplex targeted sequencing identifies recurrently mutated genes in autism spectrum disorders.
ASD
Support
Genome-wide characteristics of de novo mutations in autism
ASD
Recent Recommendation
Biallelic variants in HECT E3 paralogs, HECTD4 and UBE3C, encoding ubiquitin ligases cause neurodevelopmental disorders that overlap with Angelman syndrome
DD, ID
Autistic behavior, epilepsy/seizures, stereotypy
Recent Recommendation
Low load for disruptive mutations in autism genes and their biased transmission.
ASD

Rare

Variant ID
Variant Type
Allele Change
Residue Change
Inheritance Pattern
Inheritance Association
Family Type
Author, Year
 GEN478R001 
 missense_variant 
 c.2534C>T 
 p.Ser845Phe 
 De novo 
  
 Simplex 
 GEN478R002 
 missense_variant 
 c.2987T>G 
 p.Phe996Cys 
 De novo 
  
 Simplex 
 GEN478R003 
 frameshift_variant 
 c.1217dup 
 p.Asn406LysfsTer47 
 Familial 
 Maternal 
 Simplex 
 GEN478R004 
 missense_variant 
 c.2579C>T 
 p.Ala860Val 
 De novo 
  
 Simplex 
 GEN478R005a 
 frameshift_variant 
 c.1999del 
 p.Asp667ThrfsTer20 
 Familial 
 Both parents 
 Multiplex 
 GEN478R006a 
 copy_number_loss 
  
  
 Unknown 
  
 Simplex 
 GEN478R007 
 stop_gained 
 c.2330T>A 
 p.Leu777Ter 
 Familial 
 Maternal 
 Multiplex 

Common

No Common Variants Available
Chromosome
CNV Locus
CNV Type
# of studies
Animal Model
7
Deletion
 2
 
7
Duplication
 1
 
7
Duplication
 1
 
7
Duplication
 1
 
7
Deletion
 4
 
7
Deletion-Duplication
 5
 
7
Deletion
 2
 
7
Deletion
 7
 
7
Deletion
 3
 
7
Deletion-Duplication
 30
 

No Animal Model Data Available


Interactor Symbol Interactor Name Interactor Organism Entrez ID Uniprot ID Interaction Type Evidence Reference
CHD8 chromodomain helicase DNA binding protein 8 57680 Q9HCK8 CHIP-seq
Cotney J , et al. 2015
GOLGA2 golgin A2 2801 Q08379 Y2H; bimolecular fluorescence complementation assay
Rolland T , et al. 2014
KIAA1467 KIAA1467 57613 A2RU67 IP; LC-MS/MS
Huttlin EL , et al. 2015
TOP3B topoisomerase (DNA) III beta 8940 O95985 HITS-CLIP
Xu D , et al. 2013
UBE3A ubiquitin protein ligase E3A 7337 Q05086 IP; MS; COMPASS
Martnez-Nol G , et al. 2012

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