Summary Statistics:
ASD Reports: 56
Recent Reports: 12
Annotated variants: 120
Associated CNVs: 4
Evidence score: 5
Gene Score: 3S
Relevance to Autism
Mutations in TSC2 cause the autosomal dominant disorder tuberous sclerosis (TSC). About 25% of individuals with TSC have autism and 40%-50% meet diagnostic criteria within the autistic spectrum disorders (Smalley et al., 1998). Schaaf et al., 2011 and Kelleher et al., 2012 identified a number of TSC2 missense variants in ASD probands that were not observed in control populations. Rare de novo and inherited missense variants in TSC2 have been identified in ASD probands from the Simons Simplex Collection (ORoak et al., 2012; Bahl et al., 2013; Iossifov et al., 2014), as well as in ASD probands from the Autism Clinical and Genetic Resources in China (ACGC) cohort (Wang et al., 2016). Targeted gene panel screening of a clinical population of 100 children with ASD from the Connecticut Childrens Medical Center Autism Neurogenetics Program in Kalsner et al., 2016 identified 18 rare TSC2 variants in ASD cases (18.0%) compared to 9.8% in the ExAC database (P = 0.0062); the statistical enrichment of rare TSC2 variants in ASD cases remained significant after multiple comparisons correction. Addtional de novo loss-of-function variants and potentially damaging missense variants in the TSC2 gene were reported in ASD probands from the Autism Sequencing Consortium, the MSSNG cohort, and the SPARK cohort in Zhou et al., 2022; a two-stage analysis of rare de novo and inherited coding variants in 42,607 ASD cases, including 35,130 new cases from the SPARK cohort, in this report identified TSC2 as a gene reaching exome-wide significance (P < 2.5E-06).
Molecular Function
The product of this gene is believed to be a tumor suppressor and is able to stimulate specific GTPases.
References
Primary
Autism and tuberous sclerosis.
Tuberous sclerosis-2
ASD
Positive Association
Association of INPP1, PIK3CG, and TSC2 gene variants with autistic disorder: implications for phosphatidylinositol signalling in autism.
ASD
Negative Association
Lack of association of rare functional variants in TSC1/TSC2 genes with autism spectrum disorder.
ASD
Support
Neurological Diseases With Autism Spectrum Disorder: Role of ASD Risk Genes.
ASD
Tuberous sclerosis complex, epilepsy/seizures
Support
Tuberous sclerosis complex, ASD
Support
Genome sequencing of 320 Chinese children with epilepsy: a clinical and molecular study
DD, epilepsy/seizures
Support
Next-generation sequencing using a pre-designed gene panel for the molecular diagnosis of congenital disorders in pediatric patients.
Epilepsy/seizures
MCAs
Support
Epilepsy/seizures
Support
Disruption of Amygdala Tsc2 in Adolescence Leads to Changed Prelimbic Cellular Activity and Generalized Fear Responses at Adulthood in Rats
Support
Targeted resequencing of 358 candidate genes for autism spectrum disorder in a Chinese cohort reveals diagnostic potential and genotype-phenotype c...
ASD
Support
Anxiety disorder
BPD, depressive disorder, epilepsy/seizures
Support
Next-Generation Sequencing in Korean Children With Autism Spectrum Disorder and Comorbid Epilepsy
ASD
Epilepsy/seizures, tuberous sclerosis
Support
Excess of rare, inherited truncating mutations in autism.
ASD
Support
Tuberous sclerosis complex
ASD
Support
Sex-Dependent Social and Repetitive Behavior and Neurochemical Profile in Mouse Model of Autism Spectrum Disorder
ASD
Support
Diagnostic exome sequencing of syndromic epilepsy patients in clinical practice.
Epilepsy/seizures
DD, specific learning disability
Support
Developmental effects of constitutive mTORC1 hyperactivity and environmental enrichment on structural synaptic plasticity and behaviour in a rat model of autism spectrum disorder
ASD
Support
Utility of clinical exome sequencing in a complex Emirati pediatric cohort
ASD, DD
Support
Performance comparison of bench-top next generation sequencers using microdroplet PCR-based enrichment for targeted sequencing in patients with aut...
ASD
ID, epilepsy
Support
Autism spectrum disorder and comorbid neurodevelopmental disorders (ASD-NDDs): Clinical and genetic profile of a pediatric cohort
ASD
Epilepsy/seizures
Support
Somatic Mutations in TSC1 and TSC2 Cause Focal Cortical Dysplasia.
Focal cortical dysplasia
Support
Genetic and Phenotype Analysis of a Chinese Cohort of Infants and Children With Epilepsy
Epilepsy/seizures
ID
Support
Rare genetic susceptibility variants assessment in autism spectrum disorder: detection rate and practical use.
ASD
Support
High-throughput sequencing of mGluR signaling pathway genes reveals enrichment of rare variants in autism.
Non-syndromic ASD
Support
ID, epilepsy/seizures
Support
mTOR-related synaptic pathology causes autism spectrum disorder-associated functional hyperconnectivity
ASD
Support
Targeted sequencing identifies 91 neurodevelopmental-disorder risk genes with autism and developmental-disability biases.
ASD
Support
Drosophila functional screening of de novo variants in autism uncovers damaging variants and facilitates discovery of rare neurodevelopmental diseases
ASD
Support
Autism risk in offspring can be assessed through quantification of male sperm mosaicism.
ASD
Support
Sporadic autism exomes reveal a highly interconnected protein network of de novo mutations.
ASD
Support
DD, epilepsy/seizures
Support
Microglial ASD-related genes are involved in oligodendrocyte differentiation
Support
De novo genic mutations among a Chinese autism spectrum disorder cohort.
ASD
Support
Genetic care in geographically isolated small island communities: 8 years of experience in the Dutch Caribbean
Epilepsy/seizures
Support
Inherited and De Novo Genetic Risk for Autism Impacts Shared Networks.
ASD
Support
Oligogenic heterozygosity in individuals with high-functioning autism spectrum disorders.
ASD
Support
Tuberous sclerosis
Support
Tuberous sclerosis complex (TSC) inactivation increases neuronal network activity by enhancing Ca 2+ influx via L-type Ca 2+ channels
Tuberous sclerosis complex
Support
Everolimus improves neuropsychiatric symptoms in a patient with tuberous sclerosis carrying a novel TSC2 mutation.
Tuberous sclerosis-2
ASD, DD, epilepsy
Support
Tuberous sclerosis 2
Support
Cerebellar demyelination and neurodegeneration associated with mTORC1 hyperactivity may contribute to the developmental onset of autism-like neurobehavioral phenotype in a rat model
ASD
Highly Cited
Interaction between hamartin and tuberin, the TSC1 and TSC2 gene products.
Highly Cited
Tsc tumour suppressor proteins antagonize amino-acid-TOR signalling.
Recent Recommendation
Tuberous sclerosis complex proteins control axon formation.
Recent Recommendation
Purkinje cells derived from TSC patients display hypoexcitability and synaptic deficits associated with reduced FMRP levels and reversed by rapamycin.
Recent Recommendation
Reversal of learning deficits in a Tsc2 mouse model of tuberous sclerosis.
Recent Recommendation
Genetic testing including targeted gene panel in a diverse clinical population of children with autism spectrum disorder: Findings and implications.
ASD
Recent Recommendation
Regulation of neuronal morphology and function by the tumor suppressors Tsc1 and Tsc2.
Recent Recommendation
Low load for disruptive mutations in autism genes and their biased transmission.
ASD
Recent Recommendation
Neuroepileptic correlates of autistic symptomatology in tuberous sclerosis.
Recent Recommendation
Loss of mTOR-dependent macroautophagy causes autistic-like synaptic pruning deficits.
Recent Recommendation
Identification of regions critical for the integrity of the TSC1-TSC2-TBC1D7 complex.
Recent Recommendation
Integrating de novo and inherited variants in 42
ASD
Recent Recommendation
ARD1 stabilization of TSC2 suppresses tumorigenesis through the mTOR signaling pathway.
Recent Recommendation
Regionally specific TSC1 and TSC2 gene expression in tuberous sclerosis complex.
GEN256R002
missense_variant
c.148A>G
p.Met50Val
Unknown
Simplex
GEN256R003
missense_variant
c.1378G>A
p.Ala460Thr
Unknown
Simplex
GEN256R004
missense_variant
c.1597A>C
p.Lys533Gln
Familial
Maternal
Simplex
GEN256R005
missense_variant
c.1609C>T
p.Arg537Cys
Unknown
Simplex
GEN256R006
missense_variant
c.1816A>G
p.Ile606Val
Unknown
Simplex
GEN256R007
missense_variant
c.2032G>A
p.Ala678Thr
Familial (1 case); unknown (1 case)
Maternal (1 case)
Simplex
GEN256R008
missense_variant
c.2712C>G
p.Phe904Leu
Unknown
Simplex
GEN256R009
missense_variant
c.2950G>C
p.Glu984Gln
Familial
Paternal
Simplex
GEN256R010
missense_variant
c.3293C>T
p.Pro1098Leu
Unknown
Simplex
GEN256R011
missense_variant
c.3422C>T
p.Ala1141Val
Familial
Paternal
Simplex
GEN256R012
missense_variant
c.4106G>A
p.Arg1369Gln
Unknown
Simplex
GEN256R013
missense_variant
c.4273G>A
p.Gly1425Arg
Unknown
Simplex
GEN256R014
missense_variant
c.5094C>A
p.Ser1698Arg
Familial
Maternal
Simplex
GEN256R015
inframe_deletion
c.3846_3854del
p.Ser1282_Gly1285delinsArg
De novo
Simplex
GEN256R016
missense_variant
c.4738C>T
p.Arg1580Trp
De novo
Simplex
GEN256R017
missense_variant
c.433G>A
p.Ala145Thr
Multiplex
GEN256R018
synonymous_variant
c.618C>T
p.Cys206=
Multiplex
GEN256R019
synonymous_variant
c.1143G>A
p.Arg381=
Multiplex
GEN256R020
missense_variant
c.1292C>T
p.Ala431Val
Multiplex
GEN256R021
intron_variant
c.1839+6G>A
Multiplex
GEN256R022
missense_variant
c.1912G>A
p.Val638Met
Multiplex
GEN256R023
missense_variant
c.2155T>C
p.Tyr719His
Multiplex
GEN256R024
missense_variant
c.2621C>T
p.Pro874Leu
Multiplex
GEN256R025
synonymous_variant
c.3126G>T
p.Pro1042=
Multiplex
GEN256R026
missense_variant
c.3252C>G
p.Asp1084Glu
Multiplex
GEN256R027
missense_variant
c.3827C>T
p.Ser1276Phe
Multiplex
GEN256R028
missense_variant
c.3914C>T
p.Pro1305Leu
Multiplex
GEN256R029
missense_variant
c.3974G>A
p.Gly1325Asp
Multiplex
GEN256R030
missense_variant
c.4051G>A
p.Glu1351Lys
Multiplex
GEN256R031
missense_variant
c.4316G>A
p.Gly1439Asp
Multiplex
GEN256R032
synonymous_variant
c.4341C>T
p.Ser1447=
Multiplex
GEN256R033
missense_variant
c.4460C>G
p.Ser1487Cys
Multiplex
GEN256R034
synonymous_variant
c.5028G>A
p.Leu1676=
Multiplex
GEN256R035
intron_variant
c.5069-8C>T
Multiplex
GEN256R036
synonymous_variant
c.5175G>A
p.Val1725=
Multiplex
GEN256R037
3_prime_UTR_variant
c.*5G>A
Multiplex
GEN256R038
3_prime_UTR_variant
c.*26G>A
Multiplex
GEN256R039
missense_variant
c.190A>G
p.Ile64Val
Familial
Paternal
Simplex
GEN256R040
missense_variant
c.454C>G
p.His152Asp
Familial
Maternal
Simplex
GEN256R041
missense_variant
c.1597A>C
p.Lys533Gln
Familial
Maternal
Simplex
GEN256R042
missense_variant
c.2861A>G
p.Lys954Arg
Familial
Paternal
Simplex
GEN256R043
missense_variant
c.2950G>C
p.Glu984Gln
Familial
Paternal
Simplex
GEN256R044
missense_variant
c.4285G>T
p.Ala1429Ser
Familial
Simplex
GEN256R045
missense_variant
c.2032G>A
p.Ala678Thr
Unknown
Unknown
GEN256R046
missense_variant
c.1643G>T
p.Arg548Met
De novo
Simplex
GEN256R047
frameshift_variant
c.3202del
p.Thr1068LeufsTer2
Unknown
Unknown
GEN256R048
frameshift_variant
c.538_539del
p.Leu180GlyfsTer8
Familial
Multi-generational
GEN256R049
missense_variant
c.2377G>A
p.Glu793Lys
De novo
GEN256R050
missense_variant
c.3100G>A
p.Val1034Ile
Familial
Maternal
GEN256R051
missense_variant
c.1939G>A
p.Asp647Asn
Familial
Paternal
GEN256R052
stop_gained
c.5323A>T
p.Lys1775Ter
De novo
GEN256R053
missense_variant
c.4639G>A
p.Val1547Ile
GEN256R054
missense_variant
c.1946T>C
p.Met649Thr
Familial
Maternal
GEN256R055
missense_variant
c.583A>G
p.Ile195Val
De novo
GEN256R056
missense_variant
c.4285G>T
p.Ala1429Ser
Familial
Maternal
GEN256R057
missense_variant
c.2153G>C
p.Arg718Pro
Familial
Paternal
GEN256R058
missense_variant
c.5359G>A
p.Gly1787Ser
Unknown
GEN256R059
missense_variant
c.5359G>A
p.Gly1787Ser
Familial
Maternal
GEN256R060
missense_variant
c.5065A>G
p.Lys1689Glu
Unknown
GEN256R061
missense_variant
c.1747G>A
p.Ala583Thr
Familial
Maternal
GEN256R062
missense_variant
c.2035G>A
p.Val679Met
Unknown
GEN256R063
missense_variant
c.5413G>A
p.Glu1805Lys
Familial
Paternal
GEN256R064
missense_variant
c.1070C>T
p.Ala357Val
Familial
Paternal
GEN256R065
missense_variant
c.1318G>A
p.Gly440Ser
Unknown
GEN256R066
inframe_deletion
CCTT>C
Familial
Maternal
GEN256R067
inframe_insertion
C>CCAGCGGGTAGGGAATATGGGGCTCCCT
Familial
Paternal
GEN256R068
missense_variant
c.1747G>A
p.Ala583Thr
Unknown
GEN256R069
inframe_deletion
CCTT>C
Unknown
GEN256R070
missense_variant
c.1865G>A
p.Arg622Gln
Familial
Paternal
GEN256R071
missense_variant
c.1747G>A
p.Ala583Thr
Unknown
GEN256R072
missense_variant
c.886G>A
p.Val296Met
Familial
Paternal
GEN256R073
splice_site_variant
c.4662+1G>A
De novo
GEN256R074
frameshift_variant
c.4538_4548del
p.Glu1513AlafsTer7
De novo
GEN256R075
missense_variant
c.919C>G
p.His307Asp
Familial
Maternal
GEN256R076
missense_variant
c.1864C>T
p.Arg622Trp
Familial
Paternal
GEN256R077
missense_variant
c.2636C>T
p.Ser879Phe
De novo
Multiplex (monozygotic twins)
GEN256R078
splice_site_variant
c.600-1G>A
De novo
Simplex
GEN256R079
frameshift_variant
c.3023_3026del
p.Val1008AlafsTer7
De novo
Simplex
GEN256R080
missense_variant
c.1754G>A
p.Arg585His
Unknown
Simplex
GEN256R081
inframe_deletion
c.4744_4746del
p.Ile1582del
Unknown
GEN256R082
intron_variant
c.2838-122G>A
Unknown
GEN256R083
splice_region_variant
c.849-3T>G
Unknown
GEN256R084
splice_site_variant
c.1839+1G>T
Unknown
GEN256R085
stop_gained
c.2353C>T
p.Gln785Ter
Unknown
GEN256R086
splice_site_variant
c.2639+2T>C
Unknown
GEN256R087
splice_site_variant
c.3284+1G>A
Familial
Paternal
GEN256R088
frameshift_variant
c.4589dup
p.Val1531GlyfsTer35
Unknown
GEN256R089
splice_site_variant
c.599+1G>A
Unknown
GEN256R090
missense_variant
c.1864C>T
p.Arg622Trp
Familial
Paternal
GEN256R091
splice_site_variant
c.1443+1G>A
Unknown
GEN256R092
stop_gained
c.4183C>T
p.Gln1395Ter
Unknown
GEN256R093
frameshift_variant
c.5025_5032dup
p.Tyr1678CysfsTer151
De novo
GEN256R094
frameshift_variant
c.2182del
p.Cys728AlafsTer43
Unknown
GEN256R095
missense_variant
c.5126C>T
p.Pro1709Leu
Unknown
GEN256R096
missense_variant
c.632C>T
p.Ser211Phe
Unknown
GEN256R097
missense_variant
c.1168A>T
p.Thr390Ser
Unknown
GEN256R098
missense_variant
c.2636C>T
p.Ser879Phe
De novo
GEN256R099
inframe_deletion
c.5238_5255del
p.His1746_Arg1751del
De novo
GEN256R100
synonymous_variant
c.2586G>A
p.Ala862%3D
De novo
Simplex
GEN256R101
missense_variant
c.2044G>C
p.Gly682Arg
De novo
Simplex
GEN256R102
missense_variant
c.4470G>C
p.Glu1490Asp
De novo
Simplex
GEN256R103
splice_site_variant
c.1444-1G>A
De novo
GEN256R104
missense_variant
c.4537G>A
p.Glu1513Lys
De novo
GEN256R105
splice_site_variant
c.775-1G>C
De novo
GEN256R106
stop_gained
c.1957A>T
p.Arg653Ter
De novo
GEN256R107
frameshift_variant
c.2086_2087del
p.Cys696LeufsTer6
De novo
GEN256R108
missense_variant
c.2089T>G
p.Leu697Val
De novo
GEN256R109
frameshift_variant
c.2475del
p.Leu826TrpfsTer3
De novo
GEN256R110
missense_variant
c.2742G>C
p.Lys914Asn
De novo
GEN256R111
missense_variant
c.4856T>C
p.Phe1619Ser
De novo
GEN256R112
stop_gained
c.3412C>T
p.Arg1138Ter
Unknown
GEN256R113
frameshift_variant
c.2859dup
p.Lys954GlnfsTer6
Unknown
GEN256R114
intron_variant
c.2838-122G>A
Unknown
Simplex
GEN256R115
missense_variant
c.4672G>A
p.Glu1558Lys
Unknown
GEN256R116
missense_variant
c.4678G>A
p.Ala1560Thr
De novo
GEN256R117
missense_variant
c.2070C>G
p.Phe690Leu
Familial
Maternal
Simplex
GEN256R118
missense_variant
c.880G>A
p.Gly294Arg
De novo
Simplex
GEN256R119
splice_site_variant
c.5068+2T>C
Familial
Paternal
Multiplex
GEN256C001
intron_variant
rs2073636
c.482-348A>G;c.755-348A>G;c.644-348A>G;c.551-348A>G
C/T
AGRE
Discovery
16
Deletion-Duplication
68
16
Deletion-Duplication
2
Summary Statistics:
# of Reports: 3
# of Models: 3
External Links
Model Summary
To provide an alternative model for Tuberous Sclerosis (TSC).
References
Primary
Enhanced episodic-like memory and kindling epilepsy in a rat model of tuberous sclerosis.
Additional
Epilepsy and Tsc2 haploinsufficiency lead to autistic-like social deficit behaviors in rats.
Additional
mTOR inhibitor reverses autistic-like social deficit behaviours in adult rats with both Tsc2 haploinsufficiency and developmental status epilepticus.
Model Type:
Genetic
Model Genotype:
Heterozygous
Mutation:
Spontaneous Eker mutation.
Allele Type: Spontaneuos mutation
Strain of Origin: Long Evans
Genetic Background: Long Evans
ES Cell Line: Not Specified
Mutant ES Cell Line: Not Specified
Model Source: Not Specified
Model Type:
Genetic
Model Genotype:
Heterozygous
Mutation:
Spontaneous Eker mutation, combined with intraperitoneal kainic acid injections at P7 (3 mg/kg) and P14 (4 mg/kg).
Allele Type: Spontaneuos mutation
Strain of Origin: Long Evans
Genetic Background: Long Evans
ES Cell Line: Not Specified
Mutant ES Cell Line: Not Specified
Model Source: Not Specified
Abnormal
View More
Description: Aged rats (17-24 months) 36% exhibit cerebral hamartomas. 6.7% 8-month-old rats exhibit cerebral hamartomas
Exp Paradigm: Pathology
Pathology
8-24 months
Increased
View More
Description: Stronger induction of phospho-p42 after treatment with forskolin, while induction of phospho-p44 is unaffected
Exp Paradigm: Western blot: hippocampus treated with forskolin ex vivo
Western blot
2-6 months
Decreased
View More
Description: No change in susceptibility after single 40 or 50 mg/kg injections, increased susceptibility to stage 5 seizures after 10 to 15 consecutive 30 mg/kg injections
Exp Paradigm: Observation of chemically induced seizures: 30, 40, 50 mg/kg pentylenetetrazole (PTZ), i.p.
Observation of chemically induced seizures
3-6 months
Decreased
View More
Description: Decreased social exploration
Exp Paradigm: Reciprocal social interaction test
Reciprocal social interaction test
3-6 months
Decreased
View More
Description: Decreased rearing behavior compared to wild-type
Exp Paradigm: Open field test
Open field test
3-6 months
Inanimate object preference2
Decreased
View More
Description: Decreased exploration of object during acquisition phase
Exp Paradigm: Novel object recognition test
Novel object recognition test
3-6 months
Increased
View More
Description: Better performance in trials after 2-h delay
Exp Paradigm: Morris water maze test: delayed match-to-place protocol: 4 daily sessions of 4 trials each with 2-h delay between 1st and 2nd trial, and 15-s intertrial period between other trials; Radial maze test: 2-h delay between trials 2 and 3, of 5 daily trials-Morris water maze test: delayed match-to-place protocol
Morris water maze test
2-6 months
Increased
View More
Description: Better performance in trials after 2-h delay
Exp Paradigm: Morris water maze test: delayed match-to-place protocol: 4 daily sessions of 4 trials each with 2-h delay between 1st and 2nd trial, and 15-s intertrial period between other trials; Radial maze test: 2-h delay between trials 2 and 3, of 5 daily trials- Radial maze test
Radial maze test
2-6 months
No change
Light-dark exploration test
2-6 months
No change
Light-dark exploration test
3-6 months
No change
Light-dark exploration test
2-6 months
No change
Morris water maze test
2-6 months
No change
Radial maze test
2-6 months
Conditioned taste aversion1
No change
Conditioned taste aversion test
2-6 months
Cued or contextual fear conditioning: extinction2
No change
Fear conditioning test
3-6 months
Cued or contextual fear conditioning: memory of context2
No change
Fear conditioning test
3-6 months
Cued or contextual fear conditioning: memory of cue2
No change
Fear conditioning test
3-6 months
Object recognition memory2
No change
Novel object recognition test
3-6 months
No change
Morris water maze test
2-6 months
No change
Morris water maze test
3-6 months
No change
Radial maze test
2-6 months
Spatial reference memory1
No change
Morris water maze test
2-6 months
Spatial reference memory2
No change
Morris water maze test
3-6 months
No change
Morris water maze test
2-6 months
No change
Western blot
2-6 months
No change
Morris water maze test
2-6 months
General locomotor activity2
No change
Open field test
3-6 months
No change
Morris water maze test
2-6 months
No change
Morris water maze test
3-6 months
No change
Pathology
2-6 months
No change
Reciprocal social interaction test
3-6 months
Not Reported:
Circadian sleep/wake cycle, Communications, Developmental profile, Immune response, Maternal behavior, Molecular profile, Neuroanatomy / ultrastructure / cytoarchitecture, Neurophysiology, Physiological parameters, Repetitive behavior, Seizure, Sensory, Social behavior
General locomotor activity2
Decreased
View More
Description: Decreased distance travelled
Open field test
4 months
Decreased
View More
Description: Decreased social exploration
Reciprocal social interaction test
4 months
Increased
View More
Description: Increased social evasion
Exp Paradigm: Reciprocal social interaction test
Reciprocal social interaction test
3-6 months
Decreased
View More
Description: Decreased rearing behavior compared to wild-type
Exp Paradigm: Open field test
Open field test
3-6 months
Decreased
View More
Description: Decreased social discrimination for novel rat
Reciprocal social interaction test
4 months
Inanimate object preference1
Decreased
View More
Description: Decreased exploration of object during acquisition phase
Exp Paradigm: Novel object recognition test
Novel object recognition test
3-6 months
Decreased
View More
Description: Decreased social exploration, contact behavior
Exp Paradigm: Reciprocal social interaction test
Reciprocal social interaction test
3-6 months
Increased
View More
Description: Increased latency to enter light compartment
Exp Paradigm: Light-dark exploration test
Light-dark exploration test
3-6 months
No change
Body weight measurement
4 months
Cued or contextual fear conditioning: extinction1
No change
Fear conditioning test
3-6 months
Cued or contextual fear conditioning: memory of context1
No change
Fear conditioning test
3-6 months
Cued or contextual fear conditioning: memory of cue1
No change
Fear conditioning test
3-6 months
Object recognition memory1
No change
Novel object recognition test
3-6 months
No change
Morris water maze test
3-6 months
Spatial reference memory1
No change
Morris water maze test
3-6 months
General locomotor activity1
No change
Open field test
3-6 months
No change
Morris water maze test
3-6 months
Not Reported:
Circadian sleep/wake cycle, Communications, Developmental profile, Emotion, Immune response, Learning & memory, Maternal behavior, Molecular profile, Neuroanatomy / ultrastructure / cytoarchitecture, Neurophysiology, Physiological parameters, Repetitive behavior, Seizure, Sensory
Summary Statistics:
Total Interactions: 104
Total Publications: 58
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Interactor Symbol
Interactor Name
Interactor Organism
Entrez ID
Uniprot ID
Interaction Type
Evidence
Reference
4-Sep
septin 4
5414
O43236
Y2H
Sakai Y , et al. 2011
ACTN2
actinin, alpha 2
88
P35609
Y2H
Sakai Y , et al. 2011
AKT1
v-akt murine thymoma viral oncogene homolog 1
207
P31749
Metabolic labeling with 32P; IP/WB
Dan HC , et al. 2002
ANKRD35
ankyrin repeat domain 35
148741
Q8N283
Y2H
Sakai Y , et al. 2011
AR
androgen receptor
367
P10275
ChIP-Seq; Capillary gel electrophoresis (CGE)
Rajan P , et al. 2011
axin1
axin 1
734298
Q9YGY0
IP/WB
Mak BC , et al. 2003
C19ORF75
SIGLEC family-like protein 1
284369
Q8N7X8
IP; LC-MS/MS
Huttlin EL , et al. 2015
C9ORF128
Protein FAM221B
392307
A6H8Z2
IP; LC-MS/MS
Huttlin EL , et al. 2015
CALM1
calmodulin 1 (phosphorylase kinase, delta)
801
P62158
Phage display; GST; Bimolecular fluorescence complementation assay
Noonan DJ , et al. 2002
CAV1
caveolin 1, caveolae protein, 22kDa
857
Q03135
IP/WB
Yamamoto Y , et al. 2002
CCNA2
cyclin A2
890
P20248
IP/WB
Catania MG , et al. 2001
CCNB1
cyclin B1
891
P14635
IP/WB
Catania MG , et al. 2001
CCND1
cyclin D1
595
P24385
IP/WB
Zacharek SJ , et al. 2005
CCND2
cyclin D2
894
P30279
IP/WB
Zacharek SJ , et al. 2005
CCND3
cyclin D3
896
P30281
IP/WB
Zacharek SJ , et al. 2005
CD79B
B-cell antigen receptor complex-associated protein beta chain
974
P40259-2
IP; LC-MS/MS
Huttlin EL , et al. 2015
CD83
ITGB7
9308
Q01151
IP; LC-MS/MS
Huttlin EL , et al. 2015
CDK1
cyclin-dependent kinase 1
983
P06493
IP/WB
Catania MG , et al. 2001
CDKN1B
cyclin-dependent kinase inhibitor 1B (p27, Kip1)
1027
P46527
IP/WB
Rosner M and Hengstschlger M 2004
COL20A1
collagen, type XX, alpha 1
57642
Q9P218
IP; LC-MS/MS
Huttlin EL , et al. 2015
CRB3
crumbs homolog 3 (Drosophila)
92359
Q9BUF7
IP/WB; GST
Massey-Harroche D , et al. 2007
CUL4A
cullin 4A
8451
Q13619
IP/WB
Hu J , et al. 2008
DAPK1
death-associated protein kinase 1
1612
P53355
Solid phase binding assay; IP/WB; Metabolic labeling with 32P; WB
Stevens C , et al. 2008
DDB1
damage-specific DNA binding protein 1, 127kDa
1642
Q16531
IP/WB
Hu J , et al. 2008
DDIT4
DNA-damage-inducible transcript 4
54541
Q9NX09
IP/WB
Vega-Rubin-de-Celis S , et al. 2010
EEF1A1
eukaryotic translation elongation factor 1 alpha 1
1915
P68104
Y2H
Sakai Y , et al. 2011
ESR1
estrogen receptor 1
2099
P03372
IP/WB; GST
York B , et al. 2005
FBXW5
F-box and WD repeat domain containing 5
54661
Q969U6
Y2H; WB; in vitro ubiquitination assay; IP/WB
Hu J , et al. 2008
GAPDH
glyceraldehyde-3-phosphate dehydrogenase
2597
P04406
Y2H
Sakai Y , et al. 2011
GRB2
growth factor receptor-bound protein 2
2885
P62993
Y2H
Wang J , et al. 2008
GSK3B
glycogen synthase kinase 3 beta
2932
P49841
IP/WB
Mak BC , et al. 2003
HERC1
hect (homologous to the E6-AP (UBE3A) carboxyl terminus) domain and RCC1 (CHC1)-like domain (RLD) 1
8925
Q15751
IP; MS; IP/WB
Chong-Kopera H , et al. 2006
HSPA1A
heat shock 70kDa protein 1A
3303
P08107
IP; MS; IP/WB
Nellist M , et al. 2005
HTRA1
HtrA serine peptidase 1
5654
Q92743
Y2H; GST; IP/WB; in vitro proteolysis assay
Campioni M , et al. 2010
INADL
InaD-like (Drosophila)
10207
Q8NI35
Y2H; GST; IP/WB
Massey-Harroche D , et al. 2007
LNX1
ligand of numb-protein X 1, E3 ubiquitin protein ligase
84708
Q8TBB1
Y2H; in vitro ubiquitination assay; IP/WB
Guo Z , et al. 2012
MAPK1
mitogen-activated protein kinase 1
5594
P28482
IP/WB; Metabolic labeling with 32P; IP; MS
Ma L , et al. 2005
MAPKAP1
mitogen-activated protein kinase associated protein 1
79109
Q9BPZ7
IP/WB
Huang J , et al. 2009
MDFI
MyoD family inhibitor
4188
Q99750
Y2H
Corominas R , et al. 2014
MKRN1
makorin ring finger protein 1
23608
Q9UHC7
Y2H
Sakai Y , et al. 2011
MLST8
MTOR associated protein, LST8 homolog (S. cerevisiae)
64223
Q9BVC4
IP/WB
Huang J , et al. 2009
MRPL21
mitochondrial ribosomal protein L21
219927
Q7Z2W9
Y2H
Sakai Y , et al. 2011
MTOR
mechanistic target of rapamycin (serine/threonine kinase)
2475
P42345
IP/WB
Huang J , et al. 2009
MYCBP2
MYC binding protein 2
23077
O75592
Y2H; GST; IP/WB
Murthy V , et al. 2003
NAA10
N(alpha)-acetyltransferase 10, NatA catalytic subunit
8260
A6NM98
GST; IP/WB; in vitro acetylation assay
Kuo HP , et al. 2010
NEK1
NIMA (never in mitosis gene a)-related kinase 1
4750
Q96PY6
Y2H
Surpili MJ , et al. 2003
P4HA2
Prolyl 4-hydroxylase subunit alpha-2
8974
O15460-2
IP; LC-MS/MS
Huttlin EL , et al. 2015
P4HA3
prolyl 4-hydroxylase, alpha polypeptide III
283208
Q7Z4N8
IP; LC-MS/MS
Huttlin EL , et al. 2015
PHLDB1
pleckstrin homology-like domain, family B, member 1
23187
Q86UU1
Y2H
Sakai Y , et al. 2011
PICK1
protein interacting with PRKCA 1
9463
Q9NRD5
Y2H; GST
Sakai Y , et al. 2011
PIN1
peptidylprolyl cis/trans isomerase, NIMA-interacting 1
5300
Q13526
Y2H
Vinayagam A , et al. 2011
PKD1
polycystic kidney disease 1 (autosomal dominant)
5310
P98161
IP/WB
Dere R , et al. 2010
PLK1
polo-like kinase 1
5347
P53350
IP/WB
Astrinidis A , et al. 2005
PNKD
Probable hydrolase PNKD
25953
Q8N490-2
IP; LC-MS/MS
Huttlin EL , et al. 2015
PRKCSH
protein kinase C substrate 80K-H
5589
P14314
IP; LC-MS/MS
Huttlin EL , et al. 2015
RAB5A
RAB5A, member RAS oncogene family
5868
P20339
IP/WB
Yamamoto Y , et al. 2002
RALA
v-ral simian leukemia viral oncogene homolog A (ras related)
5898
P11233
IP/WB
Castro AF , et al. 2003
RAP1A
RAP1A, member of RAS oncogene family
5906
P62834
IP/WB
Yamamoto Y , et al. 2002
RB1CC1
RB1-inducible coiled-coil 1
9821
Q8TDY2
IP/WB
Gan B , et al. 2005
RHEB
Ras homolog enriched in brain
6009
Q15382
GTP hydrolysis assay
Garami A , et al. 2003
RICTOR
RPTOR independent companion of MTOR, complex 2
253260
Q6R327
IP/WB
Huang J , et al. 2009
RP2
retinitis pigmentosa 2 (X-linked recessive)
6102
O75695
IP; LC-MS/MS
Huttlin EL , et al. 2015
RPL4
ribosomal protein L4
6124
P36578
Y2H
Sakai Y , et al. 2011
RPS6KA1
ribosomal protein S6 kinase, 90kDa, polypeptide 1
6195
Q15418
Metabolic labeling with 32P; in vitro kinase assay; IP/WB
Roux PP , et al. 2004
RPSA
ribosomal protein SA
3921
P08865
Y2H
Sakai Y , et al. 2011
SERPINI1
serpin peptidase inhibitor, clade I (neuroserpin), member 1
5274
Q99574
Y2H; IP/WB
Sakai Y , et al. 2011
SIRT1
sirtuin 1
23411
A8K128
IP/WB
Ghosh HS , et al. 2010
SLC13A3
solute carrier family 13 (sodium-dependent dicarboxylate transporter), member 3
64849
Q8WWT9
Y2H
Sakai Y , et al. 2011
SPERT
spermatid associated
220082
Q8NA61
Y2H
Corominas R , et al. 2014
SRCRB4D
scavenger receptor cysteine rich domain containing, group B (4 domains)
136853
Q8WTU2
Y2H
Sakai Y , et al. 2011
TACC3
transforming, acidic coiled-coil containing protein 3
10460
Q9Y6A5
Y2H; GST; IP/WB
Gmez-Bald L , et al. 2010
TBC1D7
TBC1 domain family, member 7
51256
Q9P0N9
IP/WB; GST
Nakashima A , et al. 2007
TBC1D7
TBC1 domain family, member 7
51256
Q9P0N9
IP; LC-MS/MS
Huttlin EL , et al. 2015
TFAP4
transcription factor AP-4 (activating enhancer binding protein 4)
7023
Q01664
IP/WB; EMSA
Habib SL , et al. 2010
TK1
thymidine kinase 1, soluble
7083
P04183
Y2H
Vinayagam A , et al. 2011
TSC1
tuberous sclerosis 1
7248
Q92574
Y2H; IP/WB
van Slegtenhorst M , et al. 1998
TSC2
tuberous sclerosis 2
7249
P49815
IP/WB
Hoogeveen-Westerveld M , et al. 2012
UBC
ubiquitin C
7316
P63279
IP/WB
Zheng L , et al. 2008
UBE3A
ubiquitin protein ligase E3A
7337
Q05086
IP/WB; WB; GST
Zheng L , et al. 2008
US3
N/A
2703401
B9VQJ7
IP/WB; in vitro kinase assay
Chuluunbaatar U , et al. 2010
USPL1
ubiquitin specific peptidase like 1
10208
Q5W0Q7
Y2H
Sakai Y , et al. 2011
YWHAB
tyrosine 3-monooxygenase/tryptophan 5-monooxygenase activation protein, beta polypeptide
7529
P31946
GST
Nellist M , et al. 2002
YWHAE
tyrosine 3-monooxygenase/tryptophan 5-monooxygenase activation protein, epsilon polypeptide
7531
P62258
GST
Nellist M , et al. 2002
YWHAG
tyrosine 3-monooxygenase/tryptophan 5-monooxygenase activation protein, gamma polypeptide
7532
P61981
GST
Nellist M , et al. 2002
YWHAH
tyrosine 3-monooxygenase/tryptophan 5-monooxygenase activation protein, eta polypeptide
7533
Q04917
GST
Nellist M , et al. 2002
YWHAQ
tyrosine 3-monooxygenase/tryptophan 5-monooxygenase activation protein, theta polypeptide
10971
P27348
GST
Nellist M , et al. 2002
YWHAZ
tyrosine 3-monooxygenase/tryptophan 5-monooxygenase activation protein, zeta polypeptide
7534
P63104
Y2H; GST; IP/WB
Nellist M , et al. 2002
FMR1
fragile X mental retardation 1
14265
P35922
HITS-CLIP
Darnell JC , et al. 2011
NGFRAP1
nerve growth factor receptor (TNFRSF16) associated protein 1
27018
Q00994
IP/WB
Yasui S , et al. 2007
PIP4ks
Phosphatidylinositol 5-phosphate 4-kinase type-2 gamma
117150
Q91XU3
IP/WB; in vitro kinase assay; LC-MS/MS
Mackey AM , et al. 2014
Ppp2ca
protein phosphatase 2 (formerly 2A), catalytic subunit, alpha isoform
19052
P63330
IP; MS; IP/WB
Lee WJ , et al. 2006
Rbfox1
RNA binding protein, fox-1 homolog (C. elegans) 1
268859
Q9JJ43
HITS-CLIP
Weyn-Vanhentenryck SM , et al. 2014
Foxo1
forkhead box O1
56458
Q9R1E0
Y2H; IP/WB; GST
Cao Y , et al. 2006
Mapkapk2
MAP kinase-activated protein kinase 2
17164
P49138
in vitro kinase assay
Li Y , et al. 2003
PRKAA1
protein kinase, AMP-activated, alpha 1 catalytic subunit
5562
Q13131
EMSA; Metabolic labeling with 32P; in vitro kinase assay; 2-D phosphopeptide mapping
Inoki K , et al. 2003
PTK2
PTK2 protein tyrosine kinase 2
5747
Q05397
IP/WB; GST; WB
Gan B , et al. 2006
RABEP1
rabaptin, RAB GTPase binding effector protein 1
9135
Q15276
Y2H
Xiao GH , et al. 1997
ROCK1
Rho-associated, coiled-coil containing protein kinase 1
6093
Q13464
IP/WB; in vitro kinase assay
Park JH , et al. 2011
Sfn
stratifin
55948
O70456
GST; IP/WB
Liu MY , et al. 2002
SMAD2
SMAD family member 2
4087
Q15796
IP/WB; GST
Birchenall-Roberts MC , et al. 2004
SMAD3
SMAD family member 3
4088
P84022
IP/WB; GST
Birchenall-Roberts MC , et al. 2004
Spry2
sprouty homolog 2 (Drosophila)
306141
Q5HZA2
IP/WB
Scott CL , et al. 2010
AMPK
AMP-activated protein kinase alpha subunit
43904
O18645
IP/WB; in vitro kinase assay
Kim M and Lee JH 2015
ATPsynd
ATP synthase subunit d, mitochondrial
42291
Q24251
Peptide microarray; IP/WB
Sun X , et al. 2014