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Relevance to Autism

Seo et al., 2023 observed that Trpc4-/- mice displayed core symptoms of ASD (social disability and repetitive behaviors). De novo variants in the TRPC4 gene, including a de novo splice-site variant and two de novo missense variants that were predicted to be deleterious, have also been identified in ASD probands (De Rubeis et al., 2014; Zhou et al., 2022; Gupta et al., 2023).

Molecular Function

This gene encodes a member of the canonical subfamily of transient receptor potential cation channels. The encoded protein forms a non-selective calcium-permeable cation channel that is activated by Gq-coupled receptors and tyrosine kinases, and plays a role in multiple processes including endothelial permeability, vasodilation, neurotransmitter release and cell proliferation. Single nucleotide polymorphisms in this gene may be associated with generalized epilepsy with photosensitivity (von Spiczak et al., 2010).

External Links

        

References

Type
Title
Type of Disorder
Associated Disorders
Author, Year
Primary
ASD
Positive Association
Epilepsy/seizures
Support
Synaptic, transcriptional and chromatin genes disrupted in autism.
ASD
Support
ASD
DD
Support
Integrating de novo and inherited variants in 42
ASD

Rare

Variant ID
Variant Type
Allele Change
Residue Change
Inheritance Pattern
Inheritance Association
Family Type
Author, Year
 GEN1433R001 
 missense_variant 
 c.958G>A 
 p.Gly320Ser 
 De novo 
  
  
 GEN1433R002 
 missense_variant 
 c.2177T>C 
 p.Met726Thr 
 De novo 
  
  
 GEN1433R003 
 synonymous_variant 
 c.481T>C 
 p.Leu161= 
 De novo 
  
 Multiplex 
 GEN1433R004 
 splice_site_variant 
 c.379-2A>T 
  
 De novo 
  
 Simplex 
  et al.  

Common

No Common Variants Available
Chromosome
CNV Locus
CNV Type
# of studies
Animal Model
13
Duplication
 1
 
13
Deletion
 1
 
13
Duplication
 1
 
13
N/A
 1
 
13
Deletion
 1
 
13
Duplication
 2
 
13
Deletion
 1
 
13
Duplication
 1
 
13
Duplication
 1
 
13
Duplication
 1
 
13
Deletion
 13
 
13
Deletion
 1
 
13
Deletion
 1
 

No Animal Model Data Available

 

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