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Relevance to Autism

TBC1D7 forms a complex with two syndromic ASD genes, TSC1 and TSC2 (Dibble et al., 2012). A homozygous frameshift deletion variant in the TBC1D7 gene (c.538delT; p.Tyr180fsTer1), which abolished TBC1D7 expression and was associated with increased mTORC1 signalling, was detected in two affected siblings born to consanguineous parents presenting with intellectual disability and megalencephaly but without any specific features of tuberous sclerosis complex (TSC); both parents and an unaffected sibling were heterozygous for the variant (Capo-Chichi et al., 2013).

Molecular Function

Component of the TSC-TBC complex composed of the TSC1-TSC2 heterodimer and TBC1D7. Interacts with TSC1 (via C-terminal half of the coiled-coil domain) and participates in GTPase-activating protein activity, leading to inhibition of the TOR signaling cascade. TBC1D7 knockdown decreases the association of TSC1 and TSC2 and results in increased mTORC1 signaling, delayed induction of autophagy, and enhanced cell growth under poor growth conditions (Dibble et al., 2012).

External Links

        

References

Type
Title
Type of Disorder
Associated Disorders
Author, Year
Primary
TBC1D7 is a third subunit of the TSC1-TSC2 complex upstream of mTORC1.
Support
Diagnostic yield of whole-exome sequencing in non-syndromic intellectual disability
DD, ID
ADHD
Support
TBC1D7 mutations are associated with intellectual disability, macrocrania, patellar dislocation, and celiac disease.
ID
Recent Recommendation
Disruption of TBC1D7, a subunit of the TSC1-TSC2 protein complex, in intellectual disability and megalencephaly.
ID
Recent Recommendation
Identification of regions critical for the integrity of the TSC1-TSC2-TBC1D7 complex.

Rare

Variant ID
Variant Type
Allele Change
Residue Change
Inheritance Pattern
Inheritance Association
Family Type
Author, Year
 GEN543R001a 
 frameshift_variant 
 c.538del 
 p.Tyr180ThrfsTer2 
 Familial 
 Both parents 
 Multiplex 
 GEN543R002a 
 frameshift_variant 
 c.18_21del 
 p.Arg7ThrfsTer21 
 Familial 
 Both parents 
 Multiplex 
 GEN543R003a 
 splice_site_variant 
 c.666-2A>G 
  
 Familial 
 Both parents 
 Simplex 

Common

No Common Variants Available
Chromosome
CNV Locus
CNV Type
# of studies
Animal Model
6
Deletion
 3
 
6
Deletion
 4
 
6
Deletion
 2
 
6
Deletion
 1
 
6
Deletion
 1
 
6
Deletion
 1
 
6
Deletion
 1
 
6
Duplication
 1
 
6
Duplication
 2
 

No Animal Model Data Available

 

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