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Relevance to Autism

A de novo variant was identified in the 3'UTR of the TAF1L gene in an autistic proband (O'Roak et al., 2011). Other missense and 3'UTR variants were seen in controls and 1000 Genomes samples.

Molecular Function

Acts as a function substitute for TAF1/TAFII250 during male meiosis, when sex chromosomes are transcriptionally silenced.

External Links

        

References

Type
Title
Type of Disorder
Associated Disorders
Author, Year
Primary
Exome sequencing in sporadic autism spectrum disorders identifies severe de novo mutations.
ASD
Support
Integrating de novo and inherited variants in 42
ASD
Support
Mutational Landscape of Autism Spectrum Disorder Brain Tissue
ASD
Support
Inherited and De Novo Genetic Risk for Autism Impacts Shared Networks.
ASD
Highly Cited
Functional substitution for TAF(II)250 by a retroposed homolog that is expressed in human spermatogenesis.
Recent Recommendation
Cooperative binding of two acetylation marks on a histone tail by a single bromodomain.

Rare

Variant ID
Variant Type
Allele Change
Residue Change
Inheritance Pattern
Inheritance Association
Family Type
Author, Year
 GEN247R001 
 3_prime_UTR_variant 
 NM_153809.2:g.32619906G>A 
  
 De novo 
  
  
 GEN247R002 
 frameshift_variant 
 c.2511_2517del 
 p.Lys838GlyfsTer10 
 Familial 
 Paternal 
 Multiplex 
 GEN247R003 
 missense_variant 
 c.2990A>G 
 p.Asp997Gly 
 Unknown 
  
  
 GEN247R004 
 missense_variant 
 c.5338G>A 
 p.Glu1780Lys 
 De novo 
  
 Multiplex 
 GEN247R005 
 missense_variant 
 c.5326G>A 
 p.Ala1776Thr 
 De novo 
  
  
 GEN247R006 
 missense_variant 
 c.5264C>T 
 p.Pro1755Leu 
 De novo 
  
  
 GEN247R007 
 missense_variant 
 c.3641T>G 
 p.Val1214Gly 
 De novo 
  
  
 GEN247R008 
 synonymous_variant 
 c.69G>C 
 p.Ser23%3D 
 De novo 
  
  
 GEN247R009 
 missense_variant 
 c.47C>G 
 p.Thr16Ser 
 De novo 
  
  

Common

No Common Variants Available
Chromosome
CNV Locus
CNV Type
# of studies
Animal Model
9
Duplication
 2
 
9
Duplication
 2
 
9
N/A
 1
 
9
Duplication
 1
 
9
Duplication
 7
 
9
Duplication
 3
 
9
Duplication
 3
 
9
Duplication
 1
 

No Animal Model Data Available

No PIN Data Available
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