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Relevance to Autism

A de novo missense variant in the SYP gene was identified in an ASD proband (Satterstrom et al., 2020), while a maternally-inherited missense variant in this gene was identified in a male ASD proband from a cohort of 100 Vietnamese children with ASD (Tran et al., 2020). Mutations in the SYP gene had previously been identified in 4 families with X-linked mental retardation in Tarpey et al., 2009.

Molecular Function

This gene encodes an integral membrane protein of small synaptic vesicles in brain and endocrine cells. The protein also binds cholesterol and is thought to direct targeting of vesicle-associated membrane protein 2 (synaptobrevin) to intracellular compartments.

External Links

        

References

Type
Title
Type of Disorder
Associated Disorders
Author, Year
Primary
Large-Scale Exome Sequencing Study Implicates Both Developmental and Functional Changes in the Neurobiology of Autism
ASD
Support
Integrating de novo and inherited variants in 42
ASD
Support
Genetic landscape of autism spectrum disorder in Vietnamese children
ASD
Support
A systematic, large-scale resequencing screen of X-chromosome coding exons in mental retardation
X-linked mental retardation-96

Rare

Variant ID
Variant Type
Allele Change
Residue Change
Inheritance Pattern
Inheritance Association
Family Type
Author, Year
 GEN1184R001 
 missense_variant 
 c.85G>A 
 p.Val29Met 
 De novo 
  
 Simplex 
 GEN1184R002 
 missense_variant 
 c.251C>G 
 p.Ala84Gly 
 Familial 
 Maternal 
 Simplex 
 GEN1184R003 
 frameshift_variant 
 c.239dup 
 p.Tyr81ValfsTer3 
 De novo 
  
  

Common

No Common Variants Available
Chromosome
CNV Locus
CNV Type
# of studies
Animal Model
X
Deletion-Duplication
 13
 
X
Duplication
 1
 
X
Duplication
 7
 
X
Duplication
 1
 
X
Deletion
 2
 
X
Deletion
 4
 
X
Deletion-Duplication
 1
 
X
Deletion
 1
 
X
Deletion-Duplication
 21
 

No Animal Model Data Available

 

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